RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 KRTAP24-1Q3LI83 254 aa13.09□□□□□ -0.31
SIL1-202ENST00000394817 TRBV20-1A0A075B6N2 111 aa13.08□□□□□ -0.32
SIL1-202ENST00000394817 TRBV6-8A0A0A6YYG3 113 aa13.08□□□□□ -0.32
SIL1-202ENST00000394817 DEFB130BP0DP73 79 aa13.08□□□□□ -0.32
SIL1-202ENST00000394817 DEFB130AP0DP74 79 aa13.08□□□□□ -0.32
SIL1-202ENST00000394817 F5H768 121 aa13.07□□□□□ -0.32
SIL1-202ENST00000394817 PSMB2P49721 201 aa13.07□□□□□ -0.32
SIL1-202ENST00000394817 MTURNQ8N3F0 131 aa13.07□□□□□ -0.32
SIL1-202ENST00000394817 PRSS2P07478 247 aa13.07□□□□□ -0.32
SIL1-202ENST00000394817 RNF183Q96D59 192 aa13.07□□□□□ -0.32
SIL1-202ENST00000394817 ERG28Q9UKR5 140 aa13.07□□□□□ -0.32
SIL1-202ENST00000394817 FBN1P35555 2871 aaKnown RBP13.06□□□□□ -0.32
SIL1-202ENST00000394817 TCL1BO95988 128 aa13.06□□□□□ -0.32
SIL1-202ENST00000394817 IFITM1P13164 125 aa13.05□□□□□ -0.32
SIL1-202ENST00000394817 GAGE6Q13070 117 aa13.05□□□□□ -0.32
SIL1-202ENST00000394817 Q9H8V8 135 aa13.05□□□□□ -0.32
SIL1-202ENST00000394817 ETDBQ3ZM63 59 aa13.04□□□□□ -0.32
SIL1-202ENST00000394817 SH2D6Q7Z4S9 175 aa13.03□□□□□ -0.32
SIL1-202ENST00000394817 CIRBPQ14011 172 aaKnown RBP13.03□□□□□ -0.32
SIL1-202ENST00000394817 ZNF625Q96I27 306 aaPredicted RBP13.03□□□□□ -0.32
SIL1-202ENST00000394817 LYRM9A8MSI8 78 aa13.02□□□□□ -0.32
SIL1-202ENST00000394817 SMCPP49901 116 aaPredicted RBP13.02□□□□□ -0.32
SIL1-202ENST00000394817 APOC4P55056 127 aa13.02□□□□□ -0.32
SIL1-202ENST00000394817 CHCHD5Q9BSY4 110 aa13.02□□□□□ -0.32
SIL1-202ENST00000394817 IGLV4-60A0A075B6I1 120 aa13.01□□□□□ -0.33
SIL1-202ENST00000394817 SCGB1C2P0DMR2 95 aa13.01□□□□□ -0.33
SIL1-202ENST00000394817 GYPEP15421 78 aa13.01□□□□□ -0.33
SIL1-202ENST00000394817 PRIMA1Q86XR5 153 aa13.01□□□□□ -0.33
SIL1-202ENST00000394817 H7C2G1 150 aa13.01□□□□□ -0.33
SIL1-202ENST00000394817 STAB1Q9NY15 2570 aa13□□□□□ -0.33
SIL1-202ENST00000394817 NPC2P61916 151 aa13□□□□□ -0.33
SIL1-202ENST00000394817 Q1RN00 199 aa13□□□□□ -0.33
SIL1-202ENST00000394817 DEFB135Q30KP9 77 aa13□□□□□ -0.33
SIL1-202ENST00000394817 FAM222AQ5U5X8 452 aa13□□□□□ -0.33
SIL1-202ENST00000394817 ATP6V0E2Q8NHE4 81 aa13□□□□□ -0.33
SIL1-202ENST00000394817 PRO0255Q9UI72 69 aa13□□□□□ -0.33
SIL1-202ENST00000394817 DAND5Q8N907 189 aa13□□□□□ -0.33
SIL1-202ENST00000394817 TRBV30A0A0K0K1B3 111 aa12.99□□□□□ -0.33
SIL1-202ENST00000394817 HERV-K104P63124 156 aa12.99□□□□□ -0.33
SIL1-202ENST00000394817 WFDC9Q8NEX5 89 aa12.99□□□□□ -0.33
SIL1-202ENST00000394817 CMYA5Q8N3K9 4069 aa12.99□□□□□ -0.33
SIL1-202ENST00000394817 J3QR89 54 aa12.98□□□□□ -0.33
SIL1-202ENST00000394817 MAST4O15021 2626 aa12.98□□□□□ -0.33
SIL1-202ENST00000394817 WIPF1O43516 503 aa12.98□□□□□ -0.33
SIL1-202ENST00000394817 LINC00308Q8TCZ7 52 aa12.98□□□□□ -0.33
SIL1-202ENST00000394817 TRIAP1O43715 76 aa12.96□□□□□ -0.33
SIL1-202ENST00000394817 COPS9Q8WXC6 57 aa12.96□□□□□ -0.33
SIL1-202ENST00000394817 IGHV3OR16-9A0A0B4J2B5 98 aa12.96□□□□□ -0.34
SIL1-202ENST00000394817 PCP4P48539 62 aa12.96□□□□□ -0.34
SIL1-202ENST00000394817 IGHV4-28A0A0C4DH34 117 aa12.95□□□□□ -0.34
SIL1-202ENST00000394817 ICOSQ9Y6W8 199 aa12.95□□□□□ -0.34
SIL1-202ENST00000394817 NBEAL2Q6ZNJ1 2754 aa12.94□□□□□ -0.34
SIL1-202ENST00000394817 IGKV3OR2-268A0A0C4DH90 116 aa12.94□□□□□ -0.34
SIL1-202ENST00000394817 MEIG1Q5JSS6 88 aa12.94□□□□□ -0.34
SIL1-202ENST00000394817 C3orf56Q8N813 242 aa12.94□□□□□ -0.34
SIL1-202ENST00000394817 COX7B2Q8TF08 81 aa12.94□□□□□ -0.34
SIL1-202ENST00000394817 PPDPFQ9H3Y8 114 aa12.94□□□□□ -0.34
SIL1-202ENST00000394817 A0A1B0GUV1 79 aa12.94□□□□□ -0.34
SIL1-202ENST00000394817 PAX4O43316 350 aa12.94□□□□□ -0.34
SIL1-202ENST00000394817 ATXN8Q156A1 80 aa12.93□□□□□ -0.34
SIL1-202ENST00000394817 Q8NAQ8 132 aa12.93□□□□□ -0.34
SIL1-202ENST00000394817 A0A087WZ39 114 aa12.92□□□□□ -0.34
SIL1-202ENST00000394817 M0QXV9 152 aa12.92□□□□□ -0.34
SIL1-202ENST00000394817 MIFP14174 115 aa12.92□□□□□ -0.34
SIL1-202ENST00000394817 RPL13AP40429 203 aaKnown RBP12.92□□□□□ -0.34
SIL1-202ENST00000394817 SOSTDC1Q6X4U4 206 aa12.92□□□□□ -0.34
SIL1-202ENST00000394817 TEN1Q86WV5 123 aa12.92□□□□□ -0.34
SIL1-202ENST00000394817 LINC00959A0A1B0GUT2 108 aa12.92□□□□□ -0.34
SIL1-202ENST00000394817 DEFB4AO15263 64 aa12.92□□□□□ -0.34
SIL1-202ENST00000394817 FOXI1Q12951 378 aa12.92□□□□□ -0.34
SIL1-202ENST00000394817 A0A0U1RRA0 63 aa12.91□□□□□ -0.34
SIL1-202ENST00000394817 DAD1P61803 113 aa12.9□□□□□ -0.34
SIL1-202ENST00000394817 PKD1L1Q8TDX9 2849 aa12.9□□□□□ -0.34
SIL1-202ENST00000394817 C9JAW5 83 aa12.9□□□□□ -0.35
SIL1-202ENST00000394817 SLC25A20O43772 301 aa12.9□□□□□ -0.35
SIL1-202ENST00000394817 OXLD1Q5BKU9 147 aa12.9□□□□□ -0.35
SIL1-202ENST00000394817 COX6CP09669 75 aa12.89□□□□□ -0.35
SIL1-202ENST00000394817 IGHV4-30-4P0DP06 118 aa12.89□□□□□ -0.35
SIL1-202ENST00000394817 LINC01620Q4KN68 170 aa12.89□□□□□ -0.35
SIL1-202ENST00000394817 CELA1Q9UNI1 258 aa12.89□□□□□ -0.35
SIL1-202ENST00000394817 TMEM262E9PQX1 116 aa12.88□□□□□ -0.35
SIL1-202ENST00000394817 COL6A5A8TX70 2615 aa12.88□□□□□ -0.35
SIL1-202ENST00000394817 A0A096LPF7 62 aa12.88□□□□□ -0.35
SIL1-202ENST00000394817 SHISA2Q6UWI4 295 aa12.88□□□□□ -0.35
SIL1-202ENST00000394817 PPDPFLQ8WWR9 84 aa12.88□□□□□ -0.35
SIL1-202ENST00000394817 TOMM7Q9P0U1 55 aa12.88□□□□□ -0.35
SIL1-202ENST00000394817 ATP5G1P05496 136 aa12.87□□□□□ -0.35
SIL1-202ENST00000394817 ANKRD29Q8N6D5 301 aa12.87□□□□□ -0.35
SIL1-202ENST00000394817 LINC01600Q96MT4 127 aa12.87□□□□□ -0.35
SIL1-202ENST00000394817 SPATA25Q9BR10 227 aa12.86□□□□□ -0.35
SIL1-202ENST00000394817 TRAV26-1A0A087WT03 109 aa12.86□□□□□ -0.35
SIL1-202ENST00000394817 SS18Q15532 418 aa12.86□□□□□ -0.35
SIL1-202ENST00000394817 C5orf38Q86SI9 138 aa12.86□□□□□ -0.35
SIL1-202ENST00000394817 CARD19Q96LW7 228 aa12.85□□□□□ -0.35
SIL1-202ENST00000394817 GAGE12HA6NDE8 117 aa12.84□□□□□ -0.35
SIL1-202ENST00000394817 SPART-AS1P0CW21 52 aa12.84□□□□□ -0.35
SIL1-202ENST00000394817 KRTAP10-11P60412 298 aa12.84□□□□□ -0.35
SIL1-202ENST00000394817 C21orf62-AS1Q17RA5 79 aa12.84□□□□□ -0.35
SIL1-202ENST00000394817 TRBV10-2A0A0K0K1G8 114 aa12.83□□□□□ -0.36
SIL1-202ENST00000394817 IBA57-AS1B1ANH7 110 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms