RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 TRBV20-1A0A075B6N2 111 aa10.47□□□□□ -0.73
MKS1-202ENST00000393119 LYRM7Q5U5X0 104 aa10.47□□□□□ -0.73
MKS1-202ENST00000393119 DAD1P61803 113 aa10.46□□□□□ -0.73
MKS1-202ENST00000393119 VSIG2Q96IQ7 327 aa10.46□□□□□ -0.73
MKS1-202ENST00000393119 TSPEAR-AS2P59090 65 aa10.46□□□□□ -0.74
MKS1-202ENST00000393119 DAZ4Q86SG3 579 aaKnown RBP10.46□□□□□ -0.74
MKS1-202ENST00000393119 AMELXQ99217 191 aa10.46□□□□□ -0.74
MKS1-202ENST00000393119 DAZ3Q9NR90 486 aaKnown RBP10.46□□□□□ -0.74
MKS1-202ENST00000393119 GAGE6Q13070 117 aa10.45□□□□□ -0.74
MKS1-202ENST00000393119 PYGO1Q9Y3Y4 419 aa10.45□□□□□ -0.74
MKS1-202ENST00000393119 DNHD1Q96M86 4753 aa10.45□□□□□ -0.74
MKS1-202ENST00000393119 A8MZ25 164 aa10.45□□□□□ -0.74
MKS1-202ENST00000393119 NHLRC4P0CG21 123 aaPredicted RBP10.45□□□□□ -0.74
MKS1-202ENST00000393119 MIFP14174 115 aa10.45□□□□□ -0.74
MKS1-202ENST00000393119 LINC01600Q96MT4 127 aa10.45□□□□□ -0.74
MKS1-202ENST00000393119 HUWE1Q7Z6Z7 4374 aaKnown RBP10.44□□□□□ -0.74
MKS1-202ENST00000393119 LOC107984156A0A0G2JMH3 177 aa10.44□□□□□ -0.74
MKS1-202ENST00000393119 LYRM9A8MSI8 78 aa10.44□□□□□ -0.74
MKS1-202ENST00000393119 IGHV3-30P01768 117 aa10.44□□□□□ -0.74
MKS1-202ENST00000393119 CFC1BP0CG36 223 aa10.44□□□□□ -0.74
MKS1-202ENST00000393119 CFC1P0CG37 223 aa10.44□□□□□ -0.74
MKS1-202ENST00000393119 IGHV3-30-5P0DP03 117 aa10.44□□□□□ -0.74
MKS1-202ENST00000393119 ARL17AQ8IVW1 177 aa10.44□□□□□ -0.74
MKS1-202ENST00000393119 MRAPQ8TCY5 172 aa10.44□□□□□ -0.74
MKS1-202ENST00000393119 F5H768 121 aa10.44□□□□□ -0.74
MKS1-202ENST00000393119 C10orf126Q8N4M7 172 aa10.44□□□□□ -0.74
MKS1-202ENST00000393119 ANKRD29Q8N6D5 301 aa10.44□□□□□ -0.74
MKS1-202ENST00000393119 ZNF22P17026 224 aaPredicted RBP10.43□□□□□ -0.74
MKS1-202ENST00000393119 COX6A2Q02221 97 aa10.43□□□□□ -0.74
MKS1-202ENST00000393119 DGAT2L7PQ6IED9 249 aa10.43□□□□□ -0.74
MKS1-202ENST00000393119 Q8N3U1 123 aa10.43□□□□□ -0.74
MKS1-202ENST00000393119 IGKV3OR2-268A0A0C4DH90 116 aa10.43□□□□□ -0.74
MKS1-202ENST00000393119 PAX4O43316 350 aa10.43□□□□□ -0.74
MKS1-202ENST00000393119 SRSF9Q13242 221 aaKnown RBP eCLIP10.43□□□□□ -0.74
MKS1-202ENST00000393119 SCGB1D4Q6XE38 83 aa10.43□□□□□ -0.74
MKS1-202ENST00000393119 PRO0255Q9UI72 69 aa10.43□□□□□ -0.74
MKS1-202ENST00000393119 IGLV4-60A0A075B6I1 120 aa10.42□□□□□ -0.74
MKS1-202ENST00000393119 TRAV8-3A0A0A6YYJ7 113 aa10.42□□□□□ -0.74
MKS1-202ENST00000393119 TMEM262E9PQX1 116 aa10.42□□□□□ -0.74
MKS1-202ENST00000393119 SPANXA1Q9NS26 97 aa10.42□□□□□ -0.74
MKS1-202ENST00000393119 TRAV13-1A0A0B4J241 112 aa10.41□□□□□ -0.74
MKS1-202ENST00000393119 SFTA2Q6UW10 78 aa10.41□□□□□ -0.74
MKS1-202ENST00000393119 ANAPC13Q9BS18 74 aa10.41□□□□□ -0.74
MKS1-202ENST00000393119 EIF4EBP3O60516 100 aaPredicted RBP10.41□□□□□ -0.74
MKS1-202ENST00000393119 SPART-AS1P0CW21 52 aa10.41□□□□□ -0.74
MKS1-202ENST00000393119 TMEM243Q9BU79 118 aa10.41□□□□□ -0.74
MKS1-202ENST00000393119 TRBV6-8A0A0A6YYG3 113 aa10.4□□□□□ -0.74
MKS1-202ENST00000393119 DEFB121Q5J5C9 76 aa10.4□□□□□ -0.74
MKS1-202ENST00000393119 ZFAND6Q6FIF0 208 aa10.4□□□□□ -0.74
MKS1-202ENST00000393119 CHCHD5Q9BSY4 110 aa10.4□□□□□ -0.74
MKS1-202ENST00000393119 K7EIL1 84 aa10.4□□□□□ -0.74
MKS1-202ENST00000393119 PAPPA-AS1Q5QFB9 102 aa10.39□□□□□ -0.75
MKS1-202ENST00000393119 SS18L2Q9UHA2 77 aa10.39□□□□□ -0.75
MKS1-202ENST00000393119 A0A0J9YWU9 116 aa10.39□□□□□ -0.75
MKS1-202ENST00000393119 TMEM223A0PJW6 202 aa10.39□□□□□ -0.75
MKS1-202ENST00000393119 UBE2L6O14933 153 aa10.39□□□□□ -0.75
MKS1-202ENST00000393119 CDC42SE2Q9NRR3 84 aa10.39□□□□□ -0.75
MKS1-202ENST00000393119 ATP5G1P05496 136 aa10.38□□□□□ -0.75
MKS1-202ENST00000393119 MRPS36P82909 103 aaKnown RBP10.38□□□□□ -0.75
MKS1-202ENST00000393119 PRO1854Q9UHT4 67 aa10.38□□□□□ -0.75
MKS1-202ENST00000393119 Q6ZTC4 211 aa10.38□□□□□ -0.75
MKS1-202ENST00000393119 CDKN2A-AS1Q9UH64 79 aa10.38□□□□□ -0.75
MKS1-202ENST00000393119 Q6Q795 121 aa10.37□□□□□ -0.75
MKS1-202ENST00000393119 SLC25A20O43772 301 aa10.37□□□□□ -0.75
MKS1-202ENST00000393119 HERVK_113P61574 105 aa10.37□□□□□ -0.75
MKS1-202ENST00000393119 LINC00242Q5T6M2 205 aa10.37□□□□□ -0.75
MKS1-202ENST00000393119 CLPSL2Q6UWE3 100 aa10.37□□□□□ -0.75
MKS1-202ENST00000393119 IGHV3-33P01772 117 aa10.36□□□□□ -0.75
MKS1-202ENST00000393119 NANOS2P60321 138 aaKnown RBP10.36□□□□□ -0.75
MKS1-202ENST00000393119 COL7A1Q02388 2944 aa10.35□□□□□ -0.75
MKS1-202ENST00000393119 A0A0B4J2C4 111 aa10.34□□□□□ -0.75
MKS1-202ENST00000393119 J3QQQ9 107 aa10.34□□□□□ -0.75
MKS1-202ENST00000393119 TIMM21Q9BVV7 248 aa10.34□□□□□ -0.75
MKS1-202ENST00000393119 B5MCH6 92 aa10.34□□□□□ -0.75
MKS1-202ENST00000393119 RPL13AP40429 203 aaKnown RBP10.34□□□□□ -0.75
MKS1-202ENST00000393119 NDUFV3P56181 108 aaKnown RBP10.34□□□□□ -0.75
MKS1-202ENST00000393119 TINCRA0A1B0GVN0 87 aa10.33□□□□□ -0.76
MKS1-202ENST00000393119 IGHV3-30-3P0DP02 117 aa10.33□□□□□ -0.76
MKS1-202ENST00000393119 SCGB1C2P0DMR2 95 aa10.33□□□□□ -0.76
MKS1-202ENST00000393119 C9JAW5 83 aa10.32□□□□□ -0.76
MKS1-202ENST00000393119 DNAH9Q9NYC9 4486 aa10.32□□□□□ -0.76
MKS1-202ENST00000393119 A4D1N5 150 aa10.32□□□□□ -0.76
MKS1-202ENST00000393119 TMEM101Q96IK0 257 aa10.32□□□□□ -0.76
MKS1-202ENST00000393119 CSDC2Q9Y534 153 aaKnown RBP10.32□□□□□ -0.76
MKS1-202ENST00000393119 LEPROTO15243 131 aa10.31□□□□□ -0.76
MKS1-202ENST00000393119 LGALS3P17931 250 aaKnown RBP10.31□□□□□ -0.76
MKS1-202ENST00000393119 GAGE2BQ13066 116 aa10.31□□□□□ -0.76
MKS1-202ENST00000393119 GAGE2EQ4V326 116 aa10.31□□□□□ -0.76
MKS1-202ENST00000393119 GAGE2DQ9UEU5 116 aa10.31□□□□□ -0.76
MKS1-202ENST00000393119 LYSTQ99698 3801 aa10.3□□□□□ -0.76
MKS1-202ENST00000393119 LINC01620Q4KN68 170 aa10.29□□□□□ -0.76
MKS1-202ENST00000393119 CFAP161Q6P656 301 aa10.29□□□□□ -0.76
MKS1-202ENST00000393119 IGHV1-58A0A0C4DH39 117 aa10.29□□□□□ -0.76
MKS1-202ENST00000393119 CCDC179H3BU77 68 aa10.29□□□□□ -0.76
MKS1-202ENST00000393119 NTN5Q8WTR8 489 aaPredicted RBP10.29□□□□□ -0.76
MKS1-202ENST00000393119 SNCGO76070 127 aa10.28□□□□□ -0.76
MKS1-202ENST00000393119 IFITM1P13164 125 aa10.28□□□□□ -0.76
MKS1-202ENST00000393119 TIRAPP58753 221 aa10.28□□□□□ -0.76
MKS1-202ENST00000393119 ZNF625Q96I27 306 aaPredicted RBP10.28□□□□□ -0.76
MKS1-202ENST00000393119 TRBV30A0A0K0K1B3 111 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms