RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 GAPVD1Q14C86 1478 aa0.15□□□□□ -2.39
TRAJ40-201ENST00000390497 MAST4O15021 2626 aa0.15□□□□□ -2.39
TRAJ40-201ENST00000390497 CHD1O14646 1710 aa0.14□□□□□ -2.39
TRAJ40-201ENST00000390497 FXYD6-FXYD2A0A087WZ82 144 aa0.14□□□□□ -2.39
TRAJ40-201ENST00000390497 TRBV7-4A0A0J9YYF1 115 aa0.14□□□□□ -2.39
TRAJ40-201ENST00000390497 TMEM218A2RU14 115 aa0.14□□□□□ -2.39
TRAJ40-201ENST00000390497 FAM223BA6NKX1 122 aa0.14□□□□□ -2.39
TRAJ40-201ENST00000390497 DEFB123Q8N688 67 aa0.14□□□□□ -2.39
TRAJ40-201ENST00000390497 PSME4Q14997 1843 aa0.14□□□□□ -2.39
TRAJ40-201ENST00000390497 SCN7AQ01118 1682 aa0.14□□□□□ -2.39
TRAJ40-201ENST00000390497 PPRC1Q5VV67 1664 aaKnown RBP0.14□□□□□ -2.39
TRAJ40-201ENST00000390497 NCOR2Q9Y618 2525 aa0.14□□□□□ -2.39
TRAJ40-201ENST00000390497 PLXNB2O15031 1838 aa0.13□□□□□ -2.39
TRAJ40-201ENST00000390497 LINC00846Q9NV44 126 aa0.13□□□□□ -2.39
TRAJ40-201ENST00000390497 AP4S1Q9Y587 144 aa0.13□□□□□ -2.39
TRAJ40-201ENST00000390497 C1orf167Q5SNV9 1468 aa0.13□□□□□ -2.39
TRAJ40-201ENST00000390497 FYCO1Q9BQS8 1478 aa0.13□□□□□ -2.39
TRAJ40-201ENST00000390497 ABCC5O15440 1437 aa0.13□□□□□ -2.39
TRAJ40-201ENST00000390497 SETBP1Q9Y6X0 1596 aa0.12□□□□□ -2.39
TRAJ40-201ENST00000390497 ASXL3Q9C0F0 2248 aa0.12□□□□□ -2.39
TRAJ40-201ENST00000390497 COX6B1P14854 86 aa0.12□□□□□ -2.39
TRAJ40-201ENST00000390497 SEC11AP67812 179 aa0.12□□□□□ -2.39
TRAJ40-201ENST00000390497 C14orf144Q96I85 54 aa0.12□□□□□ -2.39
TRAJ40-201ENST00000390497 LINC01600Q96MT4 127 aa0.12□□□□□ -2.39
TRAJ40-201ENST00000390497 CHD9Q3L8U1 2897 aa0.12□□□□□ -2.39
TRAJ40-201ENST00000390497 TCHHQ07283 1943 aa0.12□□□□□ -2.39
TRAJ40-201ENST00000390497 PRDM15P57071 1507 aaPredicted RBP0.12□□□□□ -2.39
TRAJ40-201ENST00000390497 ZFHX3Q15911 3703 aa0.12□□□□□ -2.39
TRAJ40-201ENST00000390497 CNTLNQ9NXG0 1405 aa0.12□□□□□ -2.39
TRAJ40-201ENST00000390497 NUP188Q5SRE5 1749 aa0.11□□□□□ -2.39
TRAJ40-201ENST00000390497 HIVEP3Q5T1R4 2406 aa0.11□□□□□ -2.39
TRAJ40-201ENST00000390497 TRAV30A0A087WSZ9 112 aa0.11□□□□□ -2.39
TRAJ40-201ENST00000390497 hADV29S1A0JD25 119 aa0.11□□□□□ -2.39
TRAJ40-201ENST00000390497 SPRR1AP35321 89 aa0.11□□□□□ -2.39
TRAJ40-201ENST00000390497 FDCSPQ8NFU4 85 aa0.11□□□□□ -2.39
TRAJ40-201ENST00000390497 VAMP8Q9BV40 100 aa0.11□□□□□ -2.39
TRAJ40-201ENST00000390497 OTOGQ6ZRI0 2925 aa0.11□□□□□ -2.39
TRAJ40-201ENST00000390497 F8P00451 2351 aa0.11□□□□□ -2.39
TRAJ40-201ENST00000390497 CCDC141Q6ZP82 1450 aa0.1□□□□□ -2.39
TRAJ40-201ENST00000390497 MLH3Q9UHC1 1453 aa0.1□□□□□ -2.39
TRAJ40-201ENST00000390497 A0A0G2JMZ2 1700 aa0.1□□□□□ -2.39
TRAJ40-201ENST00000390497 XRN1Q8IZH2 1706 aaKnown RBP0.1□□□□□ -2.39
TRAJ40-201ENST00000390497 ABCA3Q99758 1704 aa0.1□□□□□ -2.39
TRAJ40-201ENST00000390497 RBP2P50120 134 aa0.1□□□□□ -2.39
TRAJ40-201ENST00000390497 SFTA2Q6UW10 78 aa0.1□□□□□ -2.39
TRAJ40-201ENST00000390497 UNC79Q9P2D8 2635 aa0.1□□□□□ -2.39
TRAJ40-201ENST00000390497 SPTBN2O15020 2390 aa0.1□□□□□ -2.39
TRAJ40-201ENST00000390497 TEX14Q8IWB6 1497 aa0.1□□□□□ -2.39
TRAJ40-201ENST00000390497 ABCC2Q92887 1545 aa0.09□□□□□ -2.39
TRAJ40-201ENST00000390497 MPC2O95563 127 aa0.09□□□□□ -2.4
TRAJ40-201ENST00000390497 LINC00032P0C843 101 aa0.09□□□□□ -2.4
TRAJ40-201ENST00000390497 ACBD7Q8N6N7 88 aa0.09□□□□□ -2.4
TRAJ40-201ENST00000390497 KIAA0556O60303 1618 aa0.09□□□□□ -2.4
TRAJ40-201ENST00000390497 CSMD3Q7Z407 3707 aa0.08□□□□□ -2.4
TRAJ40-201ENST00000390497 EDC4Q6P2E9 1401 aaKnown RBP0.08□□□□□ -2.4
TRAJ40-201ENST00000390497 CACNA1CQ13936 2221 aa0.08□□□□□ -2.4
TRAJ40-201ENST00000390497 LINC00959A0A1B0GUT2 108 aa0.08□□□□□ -2.4
TRAJ40-201ENST00000390497 ATOX1O00244 68 aa0.08□□□□□ -2.4
TRAJ40-201ENST00000390497 GNGT2O14610 69 aa0.08□□□□□ -2.4
TRAJ40-201ENST00000390497 HRNRQ86YZ3 2850 aaPredicted RBP0.08□□□□□ -2.4
TRAJ40-201ENST00000390497 AHNAK2Q8IVF2 5795 aa0.08□□□□□ -2.4
TRAJ40-201ENST00000390497 HMCN1Q96RW7 5635 aa0.08□□□□□ -2.4
TRAJ40-201ENST00000390497 IGSF10Q6WRI0 2623 aa0.07□□□□□ -2.4
TRAJ40-201ENST00000390497 VPS8Q8N3P4 1428 aa0.07□□□□□ -2.4
TRAJ40-201ENST00000390497 TRBV25-1A0A075B6N4 114 aa0.07□□□□□ -2.4
TRAJ40-201ENST00000390497 H3BQF6 201 aa0.07□□□□□ -2.4
TRAJ40-201ENST00000390497 S100A10P60903 97 aa0.07□□□□□ -2.4
TRAJ40-201ENST00000390497 PMCHL1Q16048 86 aa0.07□□□□□ -2.4
TRAJ40-201ENST00000390497 PSMG4Q5JS54 123 aa0.07□□□□□ -2.4
TRAJ40-201ENST00000390497 USMG5Q96IX5 58 aa0.07□□□□□ -2.4
TRAJ40-201ENST00000390497 PMCHL2Q9BQD1 86 aa0.07□□□□□ -2.4
TRAJ40-201ENST00000390497 CACFD1Q9UGQ2 172 aa0.07□□□□□ -2.4
TRAJ40-201ENST00000390497 BTAF1O14981 1849 aa0.07□□□□□ -2.4
TRAJ40-201ENST00000390497 PLEKHH2Q8IVE3 1493 aa0.07□□□□□ -2.4
TRAJ40-201ENST00000390497 NLRP1Q9C000 1473 aa0.07□□□□□ -2.4
TRAJ40-201ENST00000390497 RAPGEF2Q9Y4G8 1499 aa0.07□□□□□ -2.4
TRAJ40-201ENST00000390497 ANKRD36BQ8N2N9 1353 aa0.06□□□□□ -2.4
TRAJ40-201ENST00000390497 IGF2RP11717 2491 aa0.06□□□□□ -2.4
TRAJ40-201ENST00000390497 MDN1Q9NU22 5596 aa0.06□□□□□ -2.4
TRAJ40-201ENST00000390497 ATP6V1G2-DDX39BF2Z307 99 aa0.06□□□□□ -2.4
TRAJ40-201ENST00000390497 UQCRHP07919 91 aa0.06□□□□□ -2.4
TRAJ40-201ENST00000390497 COX8AP10176 69 aa0.06□□□□□ -2.4
TRAJ40-201ENST00000390497 COL4A6Q14031 1691 aa0.05□□□□□ -2.4
TRAJ40-201ENST00000390497 A0A087WVE0 104 aa0.05□□□□□ -2.4
TRAJ40-201ENST00000390497 A0A0G2JND7 137 aa0.05□□□□□ -2.4
TRAJ40-201ENST00000390497 TRGV9Q99603 122 aa0.05□□□□□ -2.4
TRAJ40-201ENST00000390497 SPRR2GQ9BYE4 73 aa0.05□□□□□ -2.4
TRAJ40-201ENST00000390497 AHCTF1Q8WYP5 2266 aa0.04□□□□□ -2.4
TRAJ40-201ENST00000390497 C2CD3Q4AC94 2353 aa0.04□□□□□ -2.4
TRAJ40-201ENST00000390497 EPRSP07814 1512 aaKnown RBP0.04□□□□□ -2.4
TRAJ40-201ENST00000390497 C7orf77A4D0Y5 90 aa0.04□□□□□ -2.4
TRAJ40-201ENST00000390497 SYS1-DBNDD2H3BUS1 97 aa0.04□□□□□ -2.4
TRAJ40-201ENST00000390497 H7BZZ5 65 aa0.04□□□□□ -2.4
TRAJ40-201ENST00000390497 K7EQZ3 153 aa0.04□□□□□ -2.4
TRAJ40-201ENST00000390497 MT-ATP8P03928 68 aa0.04□□□□□ -2.4
TRAJ40-201ENST00000390497 SERP2Q8N6R1 65 aa0.04□□□□□ -2.4
TRAJ40-201ENST00000390497 LCN9Q8WX39 176 aa0.04□□□□□ -2.4
TRAJ40-201ENST00000390497 DPY30Q9C005 99 aa0.04□□□□□ -2.4
TRAJ40-201ENST00000390497 PTPN13Q12923 2485 aa0.03□□□□□ -2.4
TRAJ40-201ENST00000390497 H0Y9P7 68 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms