RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 TMEM243Q9BU79 118 aa8.5□□□□□ -1.05
RAPGEF3-201ENST00000389212 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.5□□□□□ -1.05
RAPGEF3-201ENST00000389212 CRYGAP11844 174 aa8.5□□□□□ -1.05
RAPGEF3-201ENST00000389212 ICOSQ9Y6W8 199 aa8.5□□□□□ -1.05
RAPGEF3-201ENST00000389212 PAPPA-AS1Q5QFB9 102 aa8.49□□□□□ -1.05
RAPGEF3-201ENST00000389212 MAP6D1Q9H9H5 199 aa8.49□□□□□ -1.05
RAPGEF3-201ENST00000389212 RETNQ9HD89 108 aa8.49□□□□□ -1.05
RAPGEF3-201ENST00000389212 XCL2Q9UBD3 114 aa8.49□□□□□ -1.05
RAPGEF3-201ENST00000389212 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.49□□□□□ -1.05
RAPGEF3-201ENST00000389212 IGKV2-29A2NJV5 120 aaPredicted RBP8.49□□□□□ -1.05
RAPGEF3-201ENST00000389212 SMCR5Q8TEV8 140 aa8.49□□□□□ -1.05
RAPGEF3-201ENST00000389212 AMELXQ99217 191 aa8.49□□□□□ -1.05
RAPGEF3-201ENST00000389212 A8MZ25 164 aa8.49□□□□□ -1.05
RAPGEF3-201ENST00000389212 IMUPQ9GZP8 106 aa8.49□□□□□ -1.05
RAPGEF3-201ENST00000389212 C20orf197Q8N268 126 aa8.48□□□□□ -1.05
RAPGEF3-201ENST00000389212 TMEM263Q8WUH6 116 aaKnown RBP8.48□□□□□ -1.05
RAPGEF3-201ENST00000389212 H3BT86 120 aa8.48□□□□□ -1.05
RAPGEF3-201ENST00000389212 TMEM223A0PJW6 202 aa8.47□□□□□ -1.05
RAPGEF3-201ENST00000389212 A0A0B4J2C4 111 aa8.47□□□□□ -1.05
RAPGEF3-201ENST00000389212 FAM104AQ969W3 186 aa8.47□□□□□ -1.05
RAPGEF3-201ENST00000389212 ZNF625Q96I27 306 aaPredicted RBP8.46□□□□□ -1.05
RAPGEF3-201ENST00000389212 DEFB114Q30KQ6 69 aa8.46□□□□□ -1.06
RAPGEF3-201ENST00000389212 DNAL4O96015 105 aa8.46□□□□□ -1.06
RAPGEF3-201ENST00000389212 ATP5G1P05496 136 aa8.46□□□□□ -1.06
RAPGEF3-201ENST00000389212 KRTAP1-3Q8IUG1 177 aa8.46□□□□□ -1.06
RAPGEF3-201ENST00000389212 DAND5Q8N907 189 aa8.46□□□□□ -1.06
RAPGEF3-201ENST00000389212 C4orf3Q8WVX3 66 aa8.46□□□□□ -1.06
RAPGEF3-201ENST00000389212 SPANXCQ9NY87 97 aa8.46□□□□□ -1.06
RAPGEF3-201ENST00000389212 SETXQ7Z333 2677 aaKnown RBP8.45□□□□□ -1.06
RAPGEF3-201ENST00000389212 IGHV3-53P01767 116 aa8.45□□□□□ -1.06
RAPGEF3-201ENST00000389212 TMEM86BQ8N661 226 aa8.45□□□□□ -1.06
RAPGEF3-201ENST00000389212 SERP2Q8N6R1 65 aa8.45□□□□□ -1.06
RAPGEF3-201ENST00000389212 FAM240AA0A1B0GVK7 77 aa8.45□□□□□ -1.06
RAPGEF3-201ENST00000389212 ACYP1P07311 99 aa8.45□□□□□ -1.06
RAPGEF3-201ENST00000389212 LEPROTO15243 131 aa8.44□□□□□ -1.06
RAPGEF3-201ENST00000389212 EIF4EBP3O60516 100 aaPredicted RBP8.44□□□□□ -1.06
RAPGEF3-201ENST00000389212 RPL18AQ02543 176 aaKnown RBP8.44□□□□□ -1.06
RAPGEF3-201ENST00000389212 MPLKIPQ8TAP9 179 aa8.44□□□□□ -1.06
RAPGEF3-201ENST00000389212 LINC00467Q9BRT7 94 aa8.44□□□□□ -1.06
RAPGEF3-201ENST00000389212 RBM3P98179 157 aaKnown RBP8.44□□□□□ -1.06
RAPGEF3-201ENST00000389212 DAZ2Q13117 558 aaKnown RBP8.44□□□□□ -1.06
RAPGEF3-201ENST00000389212 ODF3L2Q3SX64 289 aa8.44□□□□□ -1.06
RAPGEF3-201ENST00000389212 DAZ4Q86SG3 579 aaKnown RBP8.44□□□□□ -1.06
RAPGEF3-201ENST00000389212 C11orf72Q8NBR9 251 aa8.44□□□□□ -1.06
RAPGEF3-201ENST00000389212 DAZ3Q9NR90 486 aaKnown RBP8.44□□□□□ -1.06
RAPGEF3-201ENST00000389212 FN1P02751 2386 aaKnown RBP8.43□□□□□ -1.06
RAPGEF3-201ENST00000389212 IGHV3-30-3P0DP02 117 aa8.43□□□□□ -1.06
RAPGEF3-201ENST00000389212 LINC01561Q8N1V8 128 aa8.43□□□□□ -1.06
RAPGEF3-201ENST00000389212 Q8N2B8 174 aa8.43□□□□□ -1.06
RAPGEF3-201ENST00000389212 TENM4Q6N022 2769 aa8.43□□□□□ -1.06
RAPGEF3-201ENST00000389212 ITPR2Q14571 2701 aa8.43□□□□□ -1.06
RAPGEF3-201ENST00000389212 DNAJC9-AS1A6NH13 148 aa8.43□□□□□ -1.06
RAPGEF3-201ENST00000389212 CHCHD7Q9BUK0 85 aa8.43□□□□□ -1.06
RAPGEF3-201ENST00000389212 ESM1Q9NQ30 184 aa8.43□□□□□ -1.06
RAPGEF3-201ENST00000389212 BAALC-AS2P0C853 105 aa8.42□□□□□ -1.06
RAPGEF3-201ENST00000389212 WFDC10AQ9H1F0 79 aa8.42□□□□□ -1.06
RAPGEF3-201ENST00000389212 TRAV23DV6A0A075B6W5 121 aa8.42□□□□□ -1.06
RAPGEF3-201ENST00000389212 INSP01308 110 aa8.42□□□□□ -1.06
RAPGEF3-201ENST00000389212 TIMM21Q9BVV7 248 aa8.42□□□□□ -1.06
RAPGEF3-201ENST00000389212 TRGV1A0A0A0MS02 117 aa8.42□□□□□ -1.06
RAPGEF3-201ENST00000389212 TRBV30A0A0K0K1B3 111 aa8.42□□□□□ -1.06
RAPGEF3-201ENST00000389212 USP17L23D6RBM5 183 aa8.42□□□□□ -1.06
RAPGEF3-201ENST00000389212 A0A0J9YXY3 114 aa8.41□□□□□ -1.06
RAPGEF3-201ENST00000389212 STHQ8IWL8 128 aa8.41□□□□□ -1.06
RAPGEF3-201ENST00000389212 A8MTW9 85 aa8.41□□□□□ -1.06
RAPGEF3-201ENST00000389212 WFDC9Q8NEX5 89 aa8.41□□□□□ -1.06
RAPGEF3-201ENST00000389212 UBE2D4Q9Y2X8 147 aa8.41□□□□□ -1.06
RAPGEF3-201ENST00000389212 FHL2Q14192 279 aa8.4□□□□□ -1.06
RAPGEF3-201ENST00000389212 C1orf158Q8N1D5 194 aa8.4□□□□□ -1.06
RAPGEF3-201ENST00000389212 Q9HAA7 133 aa8.4□□□□□ -1.06
RAPGEF3-201ENST00000389212 NOTCH2Q04721 2471 aa8.4□□□□□ -1.06
RAPGEF3-201ENST00000389212 TIRAPP58753 221 aa8.4□□□□□ -1.07
RAPGEF3-201ENST00000389212 ADAMTSL4-AS1Q5T5F5 129 aa8.4□□□□□ -1.07
RAPGEF3-201ENST00000389212 CCL24O00175 119 aa8.39□□□□□ -1.07
RAPGEF3-201ENST00000389212 GHRHP01286 108 aa8.39□□□□□ -1.07
RAPGEF3-201ENST00000389212 MRPS36P82909 103 aaKnown RBP8.39□□□□□ -1.07
RAPGEF3-201ENST00000389212 Q6ZTI0 123 aa8.39□□□□□ -1.07
RAPGEF3-201ENST00000389212 LST1O00453 97 aa8.39□□□□□ -1.07
RAPGEF3-201ENST00000389212 PLA2G2AP14555 144 aa8.39□□□□□ -1.07
RAPGEF3-201ENST00000389212 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.39□□□□□ -1.07
RAPGEF3-201ENST00000389212 SPANXDQ9BXN6 97 aa8.39□□□□□ -1.07
RAPGEF3-201ENST00000389212 NDUFA12Q9UI09 145 aa8.39□□□□□ -1.07
RAPGEF3-201ENST00000389212 SS18Q15532 418 aa8.38□□□□□ -1.07
RAPGEF3-201ENST00000389212 CDKN2A-AS1Q9UH64 79 aa8.38□□□□□ -1.07
RAPGEF3-201ENST00000389212 DGAT2L7PQ6IED9 249 aa8.37□□□□□ -1.07
RAPGEF3-201ENST00000389212 COX6A2Q02221 97 aa8.37□□□□□ -1.07
RAPGEF3-201ENST00000389212 IGHV1-58A0A0C4DH39 117 aa8.37□□□□□ -1.07
RAPGEF3-201ENST00000389212 LINC00482Q8N8I6 264 aa8.37□□□□□ -1.07
RAPGEF3-201ENST00000389212 C14orf132Q9NPU4 83 aa8.37□□□□□ -1.07
RAPGEF3-201ENST00000389212 SOSTDC1Q6X4U4 206 aa8.36□□□□□ -1.07
RAPGEF3-201ENST00000389212 LINC00474Q9P2X8 69 aa8.36□□□□□ -1.07
RAPGEF3-201ENST00000389212 SNURFQ9Y675 71 aa8.36□□□□□ -1.07
RAPGEF3-201ENST00000389212 HELZ2Q9BYK8 2649 aaKnown RBP8.36□□□□□ -1.07
RAPGEF3-201ENST00000389212 LITAFQ99732 161 aa8.36□□□□□ -1.07
RAPGEF3-201ENST00000389212 NOP10Q9NPE3 64 aaKnown RBP8.36□□□□□ -1.07
RAPGEF3-201ENST00000389212 RNASE1P07998 156 aaKnown RBP8.35□□□□□ -1.07
RAPGEF3-201ENST00000389212 HILS1P60008 231 aa8.35□□□□□ -1.07
RAPGEF3-201ENST00000389212 BEAN1Q3B7T3 259 aa8.35□□□□□ -1.07
RAPGEF3-201ENST00000389212 VSIG2Q96IQ7 327 aa8.35□□□□□ -1.07
RAPGEF3-201ENST00000389212 FASNP49327 2511 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms