RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 C9orf116Q5BN46 136 aaPredicted RBP3.67□□□□□ -1.82
LTN1-202ENST00000389194 LINC00308Q8TCZ7 52 aa3.67□□□□□ -1.82
LTN1-202ENST00000389194 PRORYQ9H606 182 aa3.67□□□□□ -1.82
LTN1-202ENST00000389194 NDUFA1O15239 70 aa3.67□□□□□ -1.82
LTN1-202ENST00000389194 CCL18P55774 89 aa3.67□□□□□ -1.82
LTN1-202ENST00000389194 COL5A1P20908 1838 aaPredicted RBP3.67□□□□□ -1.82
LTN1-202ENST00000389194 NDUFV3P56181 108 aaKnown RBP3.67□□□□□ -1.82
LTN1-202ENST00000389194 CHD6Q8TD26 2715 aa3.67□□□□□ -1.82
LTN1-202ENST00000389194 DMXL2Q8TDJ6 3036 aa3.67□□□□□ -1.82
LTN1-202ENST00000389194 C3orf84H3BNL1 204 aa3.67□□□□□ -1.82
LTN1-202ENST00000389194 CRYGDP07320 174 aa3.67□□□□□ -1.82
LTN1-202ENST00000389194 U3KQK5 164 aa3.66□□□□□ -1.82
LTN1-202ENST00000389194 TSPEAR-AS2P59090 65 aa3.66□□□□□ -1.82
LTN1-202ENST00000389194 ENHOQ6UWT2 76 aa3.66□□□□□ -1.82
LTN1-202ENST00000389194 ZNF843Q8N446 348 aa3.66□□□□□ -1.82
LTN1-202ENST00000389194 ZNF702PQ9H963 129 aa3.66□□□□□ -1.82
LTN1-202ENST00000389194 PRR4Q16378 134 aa3.66□□□□□ -1.82
LTN1-202ENST00000389194 OXLD1Q5BKU9 147 aa3.66□□□□□ -1.82
LTN1-202ENST00000389194 C20orf197Q8N268 126 aa3.66□□□□□ -1.82
LTN1-202ENST00000389194 H0YGX0 51 aa3.66□□□□□ -1.82
LTN1-202ENST00000389194 M0R2N4 97 aa3.66□□□□□ -1.82
LTN1-202ENST00000389194 MED14OSP0DP75 135 aa3.66□□□□□ -1.82
LTN1-202ENST00000389194 C6orf99Q4VX62 202 aa3.66□□□□□ -1.82
LTN1-202ENST00000389194 Q8N6K4 173 aa3.66□□□□□ -1.82
LTN1-202ENST00000389194 EBI3Q14213 229 aa3.66□□□□□ -1.82
LTN1-202ENST00000389194 MPLKIPQ8TAP9 179 aa3.66□□□□□ -1.82
LTN1-202ENST00000389194 PPDPFQ9H3Y8 114 aa3.66□□□□□ -1.82
LTN1-202ENST00000389194 DIRC1Q969H9 104 aa3.66□□□□□ -1.82
LTN1-202ENST00000389194 WDFY3Q8IZQ1 3526 aa3.65□□□□□ -1.82
LTN1-202ENST00000389194 FUSP35637 526 aaKnown RBP eCLIP3.65□□□□□ -1.82
LTN1-202ENST00000389194 COX6A2Q02221 97 aa3.65□□□□□ -1.82
LTN1-202ENST00000389194 FAM19A5Q7Z5A7 132 aaPredicted RBP3.65□□□□□ -1.82
LTN1-202ENST00000389194 RPL37AP8A6NKH3 93 aa3.65□□□□□ -1.82
LTN1-202ENST00000389194 C10orf142B7Z368 130 aa3.65□□□□□ -1.82
LTN1-202ENST00000389194 LINC00694P0DN24 101 aa3.65□□□□□ -1.82
LTN1-202ENST00000389194 XGP55808 180 aa3.65□□□□□ -1.82
LTN1-202ENST00000389194 RNF152Q8N8N0 203 aa3.65□□□□□ -1.82
LTN1-202ENST00000389194 RETNQ9HD89 108 aa3.65□□□□□ -1.82
LTN1-202ENST00000389194 CLUHP3Q96NS8 147 aa3.65□□□□□ -1.82
LTN1-202ENST00000389194 KALRNO60229 2985 aa3.65□□□□□ -1.83
LTN1-202ENST00000389194 A0A096LNJ9 63 aa3.65□□□□□ -1.83
LTN1-202ENST00000389194 UBE2AP49459 152 aa3.65□□□□□ -1.83
LTN1-202ENST00000389194 Q6ZSN1 163 aa3.65□□□□□ -1.83
LTN1-202ENST00000389194 C1orf158Q8N1D5 194 aa3.65□□□□□ -1.83
LTN1-202ENST00000389194 LINC01006Q8NI28 216 aa3.65□□□□□ -1.83
LTN1-202ENST00000389194 TRBV6-8A0A0A6YYG3 113 aa3.65□□□□□ -1.83
LTN1-202ENST00000389194 H0Y9J4 135 aa3.65□□□□□ -1.83
LTN1-202ENST00000389194 C11orf45Q8TAV5 145 aa3.65□□□□□ -1.83
LTN1-202ENST00000389194 TRBV27A0A0K0K1C4 114 aa3.64□□□□□ -1.83
LTN1-202ENST00000389194 UPK3BQ9BT76 320 aa3.64□□□□□ -1.83
LTN1-202ENST00000389194 SNURFQ9Y675 71 aa3.64□□□□□ -1.83
LTN1-202ENST00000389194 CCDC179H3BU77 68 aa3.64□□□□□ -1.83
LTN1-202ENST00000389194 HRCT1Q6UXD1 115 aa3.64□□□□□ -1.83
LTN1-202ENST00000389194 SPANXCQ9NY87 97 aa3.64□□□□□ -1.83
LTN1-202ENST00000389194 CFAP46Q8IYW2 2715 aa3.64□□□□□ -1.83
LTN1-202ENST00000389194 A8MTW9 85 aa3.64□□□□□ -1.83
LTN1-202ENST00000389194 LY6G6DO95868 133 aa3.64□□□□□ -1.83
LTN1-202ENST00000389194 TRBV6-5A0A0K0K1A5 114 aa3.64□□□□□ -1.83
LTN1-202ENST00000389194 H3BT86 120 aa3.64□□□□□ -1.83
LTN1-202ENST00000389194 POLR2KP53803 58 aaKnown RBP3.64□□□□□ -1.83
LTN1-202ENST00000389194 DEFB131BA0A096LNP1 70 aa3.64□□□□□ -1.83
LTN1-202ENST00000389194 ADAMTSL4-AS1Q5T5F5 129 aa3.64□□□□□ -1.83
LTN1-202ENST00000389194 UBE2D4Q9Y2X8 147 aa3.64□□□□□ -1.83
LTN1-202ENST00000389194 Q9UF83 564 aa3.64□□□□□ -1.83
LTN1-202ENST00000389194 KLLNB2CW77 178 aa3.63□□□□□ -1.83
LTN1-202ENST00000389194 ACYP1P07311 99 aa3.63□□□□□ -1.83
LTN1-202ENST00000389194 CXCL5P42830 114 aa3.63□□□□□ -1.83
LTN1-202ENST00000389194 RMI2Q96E14 147 aa3.63□□□□□ -1.83
LTN1-202ENST00000389194 COX7BP24311 80 aa3.63□□□□□ -1.83
LTN1-202ENST00000389194 SMIM11BQ8TCY0 68 aa3.63□□□□□ -1.83
LTN1-202ENST00000389194 FSTL3O95633 263 aa3.63□□□□□ -1.83
LTN1-202ENST00000389194 BRI3O95415 125 aa3.63□□□□□ -1.83
LTN1-202ENST00000389194 TMEM256-PLSCR3K7ERE1 68 aa3.63□□□□□ -1.83
LTN1-202ENST00000389194 IGLV4-60A0A075B6I1 120 aa3.63□□□□□ -1.83
LTN1-202ENST00000389194 ATOX1O00244 68 aa3.63□□□□□ -1.83
LTN1-202ENST00000389194 MRGPRG-AS1Q2M3A8 158 aa3.63□□□□□ -1.83
LTN1-202ENST00000389194 WFDC10BQ8IUB3 73 aa3.63□□□□□ -1.83
LTN1-202ENST00000389194 SPTBN5Q9NRC6 3674 aaKnown RBP3.62□□□□□ -1.83
LTN1-202ENST00000389194 TMEM89A2RUT3 159 aa3.62□□□□□ -1.83
LTN1-202ENST00000389194 IGIPA6NJ69 53 aa3.62□□□□□ -1.83
LTN1-202ENST00000389194 H7C423 109 aa3.62□□□□□ -1.83
LTN1-202ENST00000389194 ODF3L2Q3SX64 289 aa3.62□□□□□ -1.83
LTN1-202ENST00000389194 Q6ZQY7 126 aa3.62□□□□□ -1.83
LTN1-202ENST00000389194 A0A087WVE0 104 aa3.62□□□□□ -1.83
LTN1-202ENST00000389194 A0A0U1RQV1 116 aa3.62□□□□□ -1.83
LTN1-202ENST00000389194 NANOS2P60321 138 aaKnown RBP3.62□□□□□ -1.83
LTN1-202ENST00000389194 IGLV1-40P01703 118 aa3.62□□□□□ -1.83
LTN1-202ENST00000389194 IGLV4-69A0A075B6H9 119 aa3.62□□□□□ -1.83
LTN1-202ENST00000389194 BRK1Q8WUW1 75 aa3.62□□□□□ -1.83
LTN1-202ENST00000389194 A0A087WZ39 114 aa3.62□□□□□ -1.83
LTN1-202ENST00000389194 TEP1Q99973 2627 aaKnown RBP3.62□□□□□ -1.83
LTN1-202ENST00000389194 UBE2D1P51668 147 aa3.61□□□□□ -1.83
LTN1-202ENST00000389194 UNQ6190/PRO20217Q6UXQ8 127 aa3.61□□□□□ -1.83
LTN1-202ENST00000389194 FAM19A1Q7Z5A9 133 aa3.61□□□□□ -1.83
LTN1-202ENST00000389194 C6orf223Q8N319 242 aa3.61□□□□□ -1.83
LTN1-202ENST00000389194 C9orf85Q96MD7 179 aa3.61□□□□□ -1.83
LTN1-202ENST00000389194 FLNAP21333 2647 aaKnown RBP3.61□□□□□ -1.83
LTN1-202ENST00000389194 LINC00643Q86TS7 51 aa3.61□□□□□ -1.83
LTN1-202ENST00000389194 LINC00959A0A1B0GUT2 108 aa3.61□□□□□ -1.83
LTN1-202ENST00000389194 LINC00242Q5T6M2 205 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 974 ms