RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 PIGYQ3MUY2 71 aa0.12□□□□□ -2.39
RNU6-40P-201ENST00000384254 ACACBO00763 2458 aa0.12□□□□□ -2.39
RNU6-40P-201ENST00000384254 HMCN2Q8NDA2 5059 aa0.12□□□□□ -2.39
RNU6-40P-201ENST00000384254 UBR5O95071 2799 aaPredicted RBP0.11□□□□□ -2.39
RNU6-40P-201ENST00000384254 Q5VSD8 79 aa0.11□□□□□ -2.39
RNU6-40P-201ENST00000384254 C2orf88Q9BSF0 95 aa0.11□□□□□ -2.39
RNU6-40P-201ENST00000384254 SETD2Q9BYW2 2564 aaPredicted RBP0.11□□□□□ -2.39
RNU6-40P-201ENST00000384254 C2CD3Q4AC94 2353 aa0.11□□□□□ -2.39
RNU6-40P-201ENST00000384254 RAPGEF6Q8TEU7 1601 aa0.1□□□□□ -2.39
RNU6-40P-201ENST00000384254 MUC12Q9UKN1 5478 aa0.1□□□□□ -2.39
RNU6-40P-201ENST00000384254 TRBV6-1A0A0K0K1D8 114 aa0.1□□□□□ -2.39
RNU6-40P-201ENST00000384254 EP300Q09472 2414 aaPredicted RBP0.1□□□□□ -2.39
RNU6-40P-201ENST00000384254 BPTFQ12830 3046 aa0.1□□□□□ -2.39
RNU6-40P-201ENST00000384254 CELSR1Q9NYQ6 3014 aa0.1□□□□□ -2.39
RNU6-40P-201ENST00000384254 DOPEY2Q9Y3R5 2298 aa0.1□□□□□ -2.39
RNU6-40P-201ENST00000384254 HECTD1Q9ULT8 2610 aa0.09□□□□□ -2.39
RNU6-40P-201ENST00000384254 MYOM1P52179 1685 aa0.09□□□□□ -2.39
RNU6-40P-201ENST00000384254 C10orf71Q711Q0 1435 aa0.09□□□□□ -2.4
RNU6-40P-201ENST00000384254 DOPEY1Q5JWR5 2465 aa0.08□□□□□ -2.4
RNU6-40P-201ENST00000384254 FAM167A-AS1Q96KT0 104 aa0.08□□□□□ -2.4
RNU6-40P-201ENST00000384254 MANBALQ9NQG1 85 aa0.08□□□□□ -2.4
RNU6-40P-201ENST00000384254 CDC42SE2Q9NRR3 84 aa0.08□□□□□ -2.4
RNU6-40P-201ENST00000384254 ARL2-SNX15V9GYD0 113 aa0.08□□□□□ -2.4
RNU6-40P-201ENST00000384254 LAMC1P11047 1609 aa0.08□□□□□ -2.4
RNU6-40P-201ENST00000384254 SHROOM2Q13796 1616 aa0.08□□□□□ -2.4
RNU6-40P-201ENST00000384254 PKDREJQ9NTG1 2253 aa0.07□□□□□ -2.4
RNU6-40P-201ENST00000384254 WNK2Q9Y3S1 2297 aa0.07□□□□□ -2.4
RNU6-40P-201ENST00000384254 SETXQ7Z333 2677 aaKnown RBP0.07□□□□□ -2.4
RNU6-40P-201ENST00000384254 PTPRQQ9UMZ3 2332 aa0.07□□□□□ -2.4
RNU6-40P-201ENST00000384254 COL12A1Q99715 3063 aa0.07□□□□□ -2.4
RNU6-40P-201ENST00000384254 NAP1L6A6NFF2 107 aa0.07□□□□□ -2.4
RNU6-40P-201ENST00000384254 UBA52P62987 128 aaKnown RBP0.07□□□□□ -2.4
RNU6-40P-201ENST00000384254 WDR7Q9Y4E6 1490 aa0.07□□□□□ -2.4
RNU6-40P-201ENST00000384254 TENM4Q6N022 2769 aa0.07□□□□□ -2.4
RNU6-40P-201ENST00000384254 MYO7BQ6PIF6 2116 aa0.07□□□□□ -2.4
RNU6-40P-201ENST00000384254 SCAPERQ9BY12 1400 aa0.06□□□□□ -2.4
RNU6-40P-201ENST00000384254 KDM5AP29375 1690 aaKnown RBP0.06□□□□□ -2.4
RNU6-40P-201ENST00000384254 PPRC1Q5VV67 1664 aaKnown RBP0.06□□□□□ -2.4
RNU6-40P-201ENST00000384254 AKAP6Q13023 2319 aa0.06□□□□□ -2.4
RNU6-40P-201ENST00000384254 I3L2K1 104 aa0.06□□□□□ -2.4
RNU6-40P-201ENST00000384254 IGLC1P0CG04 106 aa0.06□□□□□ -2.4
RNU6-40P-201ENST00000384254 TMEM263Q8WUH6 116 aaKnown RBP0.06□□□□□ -2.4
RNU6-40P-201ENST00000384254 ANKRD11Q6UB99 2663 aaPredicted RBP0.06□□□□□ -2.4
RNU6-40P-201ENST00000384254 CCDC168Q8NDH2 2452 aa0.06□□□□□ -2.4
RNU6-40P-201ENST00000384254 PDZD2O15018 2839 aa0.05□□□□□ -2.4
RNU6-40P-201ENST00000384254 MAPKBP1O60336 1514 aa0.05□□□□□ -2.4
RNU6-40P-201ENST00000384254 COX6CP09669 75 aa0.05□□□□□ -2.4
RNU6-40P-201ENST00000384254 GTF2H5Q6ZYL4 71 aa0.05□□□□□ -2.4
RNU6-40P-201ENST00000384254 ZANQ9Y493 2812 aa0.05□□□□□ -2.4
RNU6-40P-201ENST00000384254 CHD8Q9HCK8 2581 aa0.04□□□□□ -2.4
RNU6-40P-201ENST00000384254 TRANK1O15050 2925 aa0.04□□□□□ -2.4
RNU6-40P-201ENST00000384254 BTAF1O14981 1849 aa0.04□□□□□ -2.4
RNU6-40P-201ENST00000384254 NRKQ7Z2Y5 1582 aa0.04□□□□□ -2.4
RNU6-40P-201ENST00000384254 LINC00587B1AMM8 73 aa0.04□□□□□ -2.4
RNU6-40P-201ENST00000384254 TRAPPC2P0DI81 140 aa0.04□□□□□ -2.4
RNU6-40P-201ENST00000384254 TRAPPC2BP0DI82 140 aa0.04□□□□□ -2.4
RNU6-40P-201ENST00000384254 SPRR1AP35321 89 aa0.04□□□□□ -2.4
RNU6-40P-201ENST00000384254 Q0VG73 95 aa0.04□□□□□ -2.4
RNU6-40P-201ENST00000384254 FAM223AQ8IWN6 122 aa0.03□□□□□ -2.4
RNU6-40P-201ENST00000384254 POLA1P09884 1462 aaPredicted RBP0.03□□□□□ -2.41
RNU6-40P-201ENST00000384254 USP9XQ93008 2570 aaPredicted RBP0.02□□□□□ -2.41
RNU6-40P-201ENST00000384254 PAPPAQ13219 1627 aa0.02□□□□□ -2.41
RNU6-40P-201ENST00000384254 USF3Q68DE3 2245 aa0.02□□□□□ -2.41
RNU6-40P-201ENST00000384254 MGAM2Q2M2H8 2515 aa0.02□□□□□ -2.41
RNU6-40P-201ENST00000384254 H3BQ15 152 aa0.02□□□□□ -2.41
RNU6-40P-201ENST00000384254 PRO1854Q9UHT4 67 aa0.02□□□□□ -2.41
RNU6-40P-201ENST00000384254 MYO18BQ8IUG5 2567 aa0.02□□□□□ -2.41
RNU6-40P-201ENST00000384254 NBEAL2Q6ZNJ1 2754 aa0.02□□□□□ -2.41
RNU6-40P-201ENST00000384254 LRRK2Q5S007 2527 aa0.02□□□□□ -2.41
RNU6-40P-201ENST00000384254 USH2AO75445 5202 aa0.01□□□□□ -2.41
RNU6-40P-201ENST00000384254 C12orf57Q99622 126 aa0.01□□□□□ -2.41
RNU6-40P-201ENST00000384254 FAT3Q8TDW7 4589 aa0□□□□□ -2.41
RNU6-40P-201ENST00000384254 USP9YO00507 2555 aaPredicted RBP0□□□□□ -2.41
RNU6-40P-201ENST00000384254 KRTDAPP60985 99 aa0□□□□□ -2.41
RNU6-40P-201ENST00000384254 FDCSPQ8NFU4 85 aa0□□□□□ -2.41
RNU6-40P-201ENST00000384254 SPRR4Q96PI1 79 aa0□□□□□ -2.41
RNU6-40P-201ENST00000384254 ARHGEF12Q9NZN5 1544 aa0□□□□□ -2.41
RNU6-40P-201ENST00000384254 TENM2Q9NT68 2774 aa-0□□□□□ -2.41
RNU6-40P-201ENST00000384254 TET3O43151 1660 aa-0.01□□□□□ -2.41
RNU6-40P-201ENST00000384254 ARHGEF5Q12774 1597 aa-0.01□□□□□ -2.41
RNU6-40P-201ENST00000384254 FAM135AQ9P2D6 1515 aa-0.01□□□□□ -2.41
RNU6-40P-201ENST00000384254 PZPP20742 1482 aa-0.01□□□□□ -2.41
RNU6-40P-201ENST00000384254 SNCAP37840 140 aa-0.01□□□□□ -2.41
RNU6-40P-201ENST00000384254 C10orf113Q5VZT2 155 aa-0.01□□□□□ -2.41
RNU6-40P-201ENST00000384254 LAMA3Q16787 3333 aa-0.01□□□□□ -2.41
RNU6-40P-201ENST00000384254 ITPR1Q14643 2758 aa-0.01□□□□□ -2.41
RNU6-40P-201ENST00000384254 MAP1BP46821 2468 aaKnown RBP-0.02□□□□□ -2.41
RNU6-40P-201ENST00000384254 HMGXB3Q12766 1538 aa-0.02□□□□□ -2.41
RNU6-40P-201ENST00000384254 A0A1B0GWA3 101 aa-0.02□□□□□ -2.41
RNU6-40P-201ENST00000384254 C20orf202A1L168 122 aa-0.02□□□□□ -2.41
RNU6-40P-201ENST00000384254 CRYM-AS1A6NIL9 109 aa-0.02□□□□□ -2.41
RNU6-40P-201ENST00000384254 COX6B1P14854 86 aa-0.02□□□□□ -2.41
RNU6-40P-201ENST00000384254 UBE2D3P61077 147 aa-0.02□□□□□ -2.41
RNU6-40P-201ENST00000384254 UBE2D2P62837 147 aa-0.02□□□□□ -2.41
RNU6-40P-201ENST00000384254 SFTA2Q6UW10 78 aa-0.02□□□□□ -2.41
RNU6-40P-201ENST00000384254 PRO1933Q9H354 126 aa-0.02□□□□□ -2.41
RNU6-40P-201ENST00000384254 ARHGAP5Q13017 1502 aa-0.03□□□□□ -2.41
RNU6-40P-201ENST00000384254 EHBP1L1Q8N3D4 1523 aa-0.03□□□□□ -2.41
RNU6-40P-201ENST00000384254 NSD3Q9BZ95 1437 aa-0.03□□□□□ -2.41
RNU6-40P-201ENST00000384254 AKAP13Q12802 2813 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms