RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 DSCR8Q96T75 97 aa10.01□□□□□ -0.81
SDC1-202ENST00000381150 IGHV4-31P0DP07 118 aa10.01□□□□□ -0.81
SDC1-202ENST00000381150 LINC00158P58513 81 aa10.01□□□□□ -0.81
SDC1-202ENST00000381150 UBE2E2Q96LR5 201 aa10.01□□□□□ -0.81
SDC1-202ENST00000381150 TRACP01848 142 aa10□□□□□ -0.81
SDC1-202ENST00000381150 CRPP02741 224 aa10□□□□□ -0.81
SDC1-202ENST00000381150 PFN2P35080 140 aa10□□□□□ -0.81
SDC1-202ENST00000381150 CHCHD7Q9BUK0 85 aa10□□□□□ -0.81
SDC1-202ENST00000381150 PYGO1Q9Y3Y4 419 aa10□□□□□ -0.81
SDC1-202ENST00000381150 TEX15Q9BXT5 2789 aa9.99□□□□□ -0.81
SDC1-202ENST00000381150 ZNF702PQ9H963 129 aa9.99□□□□□ -0.81
SDC1-202ENST00000381150 COX7CP15954 63 aa9.99□□□□□ -0.81
SDC1-202ENST00000381150 LINC00526Q96FQ7 95 aa9.99□□□□□ -0.81
SDC1-202ENST00000381150 NDUFA1O15239 70 aa9.99□□□□□ -0.81
SDC1-202ENST00000381150 RNF152Q8N8N0 203 aa9.98□□□□□ -0.81
SDC1-202ENST00000381150 WFDC9Q8NEX5 89 aa9.98□□□□□ -0.81
SDC1-202ENST00000381150 CYSTM1Q9H1C7 97 aa9.98□□□□□ -0.81
SDC1-202ENST00000381150 XCL2Q9UBD3 114 aa9.98□□□□□ -0.81
SDC1-202ENST00000381150 INAFM2P0DMQ5 153 aa9.98□□□□□ -0.81
SDC1-202ENST00000381150 MALP21145 153 aa9.98□□□□□ -0.81
SDC1-202ENST00000381150 ACANP16112 2415 aa9.98□□□□□ -0.81
SDC1-202ENST00000381150 TRGV1A0A0A0MS02 117 aa9.97□□□□□ -0.81
SDC1-202ENST00000381150 NCR3O14931 201 aa9.97□□□□□ -0.81
SDC1-202ENST00000381150 IMUPQ9GZP8 106 aa9.97□□□□□ -0.81
SDC1-202ENST00000381150 NOTCH2Q04721 2471 aa9.97□□□□□ -0.81
SDC1-202ENST00000381150 HIVEP2P31629 2446 aa9.97□□□□□ -0.81
SDC1-202ENST00000381150 SMIM9A6NGZ8 99 aa9.97□□□□□ -0.81
SDC1-202ENST00000381150 C9orf129Q5T035 196 aaKnown RBP9.97□□□□□ -0.81
SDC1-202ENST00000381150 K7EQG2 157 aa9.96□□□□□ -0.81
SDC1-202ENST00000381150 PAX4O43316 350 aa9.96□□□□□ -0.81
SDC1-202ENST00000381150 MIR7-3HGQ8N6C7 128 aa9.96□□□□□ -0.81
SDC1-202ENST00000381150 NBPF19A0A087WUL8 3843 aa9.96□□□□□ -0.82
SDC1-202ENST00000381150 LECT2O14960 151 aa9.96□□□□□ -0.82
SDC1-202ENST00000381150 LINC00242Q5T6M2 205 aa9.96□□□□□ -0.82
SDC1-202ENST00000381150 A0A087WYN8 130 aa9.95□□□□□ -0.82
SDC1-202ENST00000381150 DEFB121Q5J5C9 76 aa9.95□□□□□ -0.82
SDC1-202ENST00000381150 UBE2L6O14933 153 aa9.95□□□□□ -0.82
SDC1-202ENST00000381150 DEFB113Q30KQ7 82 aa9.95□□□□□ -0.82
SDC1-202ENST00000381150 KRTAP1-3Q8IUG1 177 aa9.95□□□□□ -0.82
SDC1-202ENST00000381150 SND1-IT1Q9HBX3 110 aa9.95□□□□□ -0.82
SDC1-202ENST00000381150 GCN1Q92616 2671 aaKnown RBP9.95□□□□□ -0.82
SDC1-202ENST00000381150 ATOX1O00244 68 aa9.94□□□□□ -0.82
SDC1-202ENST00000381150 ZNF415Q09FC8 603 aa9.94□□□□□ -0.82
SDC1-202ENST00000381150 C11orf44Q8N8P7 122 aa9.94□□□□□ -0.82
SDC1-202ENST00000381150 APCP25054 2843 aa9.94□□□□□ -0.82
SDC1-202ENST00000381150 C5orf47Q569G3 176 aa9.94□□□□□ -0.82
SDC1-202ENST00000381150 AKAP9Q99996 3911 aa9.94□□□□□ -0.82
SDC1-202ENST00000381150 RPL36AP83881 106 aaKnown RBP9.93□□□□□ -0.82
SDC1-202ENST00000381150 HIST2H2BCQ6DN03 193 aa9.93□□□□□ -0.82
SDC1-202ENST00000381150 LRRC75A-AS1Q8N1F1 130 aa9.93□□□□□ -0.82
SDC1-202ENST00000381150 RPL36ALQ969Q0 106 aaKnown RBP9.93□□□□□ -0.82
SDC1-202ENST00000381150 LINC00846Q9NV44 126 aa9.93□□□□□ -0.82
SDC1-202ENST00000381150 SMIM1B2RUZ4 78 aa9.92□□□□□ -0.82
SDC1-202ENST00000381150 SLURP1P55000 103 aa9.92□□□□□ -0.82
SDC1-202ENST00000381150 COPS9Q8WXC6 57 aa9.92□□□□□ -0.82
SDC1-202ENST00000381150 TRAV23DV6A0A075B6W5 121 aa9.92□□□□□ -0.82
SDC1-202ENST00000381150 C18orf65Q6ZTR6 163 aa9.92□□□□□ -0.82
SDC1-202ENST00000381150 HRCT1Q6UXD1 115 aa9.91□□□□□ -0.82
SDC1-202ENST00000381150 TIMM17BO60830 172 aa9.91□□□□□ -0.82
SDC1-202ENST00000381150 HILS1P60008 231 aa9.91□□□□□ -0.82
SDC1-202ENST00000381150 RPL18AQ02543 176 aaKnown RBP9.9□□□□□ -0.82
SDC1-202ENST00000381150 LINC00337Q8N6G1 96 aa9.9□□□□□ -0.82
SDC1-202ENST00000381150 SMIM11BQ8TCY0 68 aa9.9□□□□□ -0.82
SDC1-202ENST00000381150 DYNLRB2Q8TF09 96 aa9.9□□□□□ -0.82
SDC1-202ENST00000381150 C4orf26Q17RF5 130 aa9.9□□□□□ -0.83
SDC1-202ENST00000381150 C5orf38Q86SI9 138 aa9.9□□□□□ -0.83
SDC1-202ENST00000381150 Q96MF0 132 aa9.89□□□□□ -0.83
SDC1-202ENST00000381150 USP17L23D6RBM5 183 aa9.89□□□□□ -0.83
SDC1-202ENST00000381150 LINC01600Q96MT4 127 aa9.89□□□□□ -0.83
SDC1-202ENST00000381150 TRAV13-2A0A0B4J235 113 aa9.88□□□□□ -0.83
SDC1-202ENST00000381150 RBMY1BA6NDE4 496 aaKnown RBP9.88□□□□□ -0.83
SDC1-202ENST00000381150 RBMY1EA6NEQ0 496 aaKnown RBP9.88□□□□□ -0.83
SDC1-202ENST00000381150 RBMY1DP0C7P1 496 aaKnown RBP9.88□□□□□ -0.83
SDC1-202ENST00000381150 CXCL5P42830 114 aa9.87□□□□□ -0.83
SDC1-202ENST00000381150 C2orf48Q96LS8 159 aa9.87□□□□□ -0.83
SDC1-202ENST00000381150 C22orf24Q9Y442 160 aa9.86□□□□□ -0.83
SDC1-202ENST00000381150 A8MTW9 85 aa9.86□□□□□ -0.83
SDC1-202ENST00000381150 BEAN1Q3B7T3 259 aa9.85□□□□□ -0.83
SDC1-202ENST00000381150 C20orf197Q8N268 126 aa9.85□□□□□ -0.83
SDC1-202ENST00000381150 CLPSL2Q6UWE3 100 aa9.85□□□□□ -0.83
SDC1-202ENST00000381150 Q6ZTI0 123 aa9.85□□□□□ -0.83
SDC1-202ENST00000381150 SERP2Q8N6R1 65 aa9.85□□□□□ -0.83
SDC1-202ENST00000381150 TRGV2A0A075B6R0 118 aa9.85□□□□□ -0.83
SDC1-202ENST00000381150 CRYGAP11844 174 aa9.85□□□□□ -0.83
SDC1-202ENST00000381150 ITPR3Q14573 2671 aa9.84□□□□□ -0.83
SDC1-202ENST00000381150 DPH3Q96FX2 82 aa9.84□□□□□ -0.83
SDC1-202ENST00000381150 TENM4Q6N022 2769 aa9.84□□□□□ -0.83
SDC1-202ENST00000381150 IGLV5-39A0A0G2JS06 123 aa9.84□□□□□ -0.83
SDC1-202ENST00000381150 LOC100131303A0A0U1RQF7 123 aa9.84□□□□□ -0.83
SDC1-202ENST00000381150 A0A1W2PRX2 142 aa9.84□□□□□ -0.83
SDC1-202ENST00000381150 GHRHP01286 108 aa9.84□□□□□ -0.83
SDC1-202ENST00000381150 PRR3P79522 188 aaKnown RBP9.83□□□□□ -0.84
SDC1-202ENST00000381150 ENHOQ6UWT2 76 aa9.83□□□□□ -0.84
SDC1-202ENST00000381150 COX7B2Q8TF08 81 aa9.83□□□□□ -0.84
SDC1-202ENST00000381150 INSP01308 110 aa9.83□□□□□ -0.84
SDC1-202ENST00000381150 FAM19A1Q7Z5A9 133 aa9.83□□□□□ -0.84
SDC1-202ENST00000381150 C4orf3Q8WVX3 66 aa9.83□□□□□ -0.84
SDC1-202ENST00000381150 NOP10Q9NPE3 64 aaKnown RBP9.83□□□□□ -0.84
SDC1-202ENST00000381150 IGKV2-28A0A075B6P5 120 aa9.82□□□□□ -0.84
SDC1-202ENST00000381150 IGKV2D-28P01615 120 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms