RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 SCXQ7RTU7 201 aa7.04□□□□□ -1.28
SNX1-202ENST00000380285 SNURFQ9Y675 71 aa7.04□□□□□ -1.28
SNX1-202ENST00000380285 PTPN13Q12923 2485 aa7.04□□□□□ -1.28
SNX1-202ENST00000380285 F8WDY8 70 aa7.04□□□□□ -1.28
SNX1-202ENST00000380285 BRI3O95415 125 aa7.04□□□□□ -1.28
SNX1-202ENST00000380285 NTM-AS1Q6ZSK4 140 aa7.04□□□□□ -1.28
SNX1-202ENST00000380285 DCANP1Q8TF63 244 aa7.04□□□□□ -1.28
SNX1-202ENST00000380285 WFDC10BQ8IUB3 73 aa7.04□□□□□ -1.28
SNX1-202ENST00000380285 Q8N9L7 120 aa7.04□□□□□ -1.28
SNX1-202ENST00000380285 HILS1P60008 231 aa7.03□□□□□ -1.28
SNX1-202ENST00000380285 IGLV1-40P01703 118 aa7.03□□□□□ -1.28
SNX1-202ENST00000380285 C11orf21Q9P2W6 132 aa7.03□□□□□ -1.28
SNX1-202ENST00000380285 URB1-AS1Q96HZ7 61 aa7.03□□□□□ -1.28
SNX1-202ENST00000380285 CHCHD7Q9BUK0 85 aa7.03□□□□□ -1.28
SNX1-202ENST00000380285 IGHV4-31P0DP07 118 aa7.02□□□□□ -1.29
SNX1-202ENST00000380285 DEFB4AO15263 64 aa7.02□□□□□ -1.29
SNX1-202ENST00000380285 Q8N814 137 aa7.02□□□□□ -1.29
SNX1-202ENST00000380285 PLA2G5P39877 138 aa7.02□□□□□ -1.29
SNX1-202ENST00000380285 PRR9Q5T870 116 aa7.02□□□□□ -1.29
SNX1-202ENST00000380285 C3orf84H3BNL1 204 aa7.02□□□□□ -1.29
SNX1-202ENST00000380285 HRCT1Q6UXD1 115 aa7.01□□□□□ -1.29
SNX1-202ENST00000380285 POM121L12Q8N7R1 296 aa7.01□□□□□ -1.29
SNX1-202ENST00000380285 LINC01561Q8N1V8 128 aa7.01□□□□□ -1.29
SNX1-202ENST00000380285 LINC00474Q9P2X8 69 aa7.01□□□□□ -1.29
SNX1-202ENST00000380285 ZNF580Q9UK33 172 aa7.01□□□□□ -1.29
SNX1-202ENST00000380285 DEFB131BA0A096LNP1 70 aa7.01□□□□□ -1.29
SNX1-202ENST00000380285 CRIP2P52943 208 aaPredicted RBP7.01□□□□□ -1.29
SNX1-202ENST00000380285 AMELXQ99217 191 aa7.01□□□□□ -1.29
SNX1-202ENST00000380285 LOC107984640A0A0U1RRK4 108 aa7.01□□□□□ -1.29
SNX1-202ENST00000380285 A0A087WZ39 114 aa7□□□□□ -1.29
SNX1-202ENST00000380285 XAGE1AQ9HD64 81 aa7□□□□□ -1.29
SNX1-202ENST00000380285 IGKV2-24A0A0C4DH68 120 aa7□□□□□ -1.29
SNX1-202ENST00000380285 TRBV10-3A0A0K0K1G6 114 aa7□□□□□ -1.29
SNX1-202ENST00000380285 C2CD3Q4AC94 2353 aa6.99□□□□□ -1.29
SNX1-202ENST00000380285 TRBV7-7A0A0K0K1E9 115 aa6.99□□□□□ -1.29
SNX1-202ENST00000380285 LINC01546A6NGU7 62 aa6.99□□□□□ -1.29
SNX1-202ENST00000380285 PROK1P58294 105 aa6.99□□□□□ -1.29
SNX1-202ENST00000380285 LINC00242Q5T6M2 205 aa6.99□□□□□ -1.29
SNX1-202ENST00000380285 PRYO14603 147 aa6.99□□□□□ -1.29
SNX1-202ENST00000380285 SMIM1B2RUZ4 78 aa6.99□□□□□ -1.29
SNX1-202ENST00000380285 TRAV10A0A0B4J240 114 aa6.98□□□□□ -1.29
SNX1-202ENST00000380285 A8MZ25 164 aa6.98□□□□□ -1.29
SNX1-202ENST00000380285 EGFEM1PQ0D2K5 195 aa6.98□□□□□ -1.29
SNX1-202ENST00000380285 BCE1O60756 84 aa6.98□□□□□ -1.29
SNX1-202ENST00000380285 ZFHX2Q9C0A1 2572 aaPredicted RBP6.98□□□□□ -1.29
SNX1-202ENST00000380285 PMAIP1Q13794 54 aa6.98□□□□□ -1.29
SNX1-202ENST00000380285 SONP18583 2426 aaKnown RBP6.98□□□□□ -1.29
SNX1-202ENST00000380285 ZNF702PQ9H963 129 aa6.97□□□□□ -1.29
SNX1-202ENST00000380285 A0A0J9YWU9 116 aa6.97□□□□□ -1.29
SNX1-202ENST00000380285 FAM19A5Q7Z5A7 132 aaPredicted RBP6.97□□□□□ -1.29
SNX1-202ENST00000380285 PRO0628Q9UI54 55 aa6.97□□□□□ -1.29
SNX1-202ENST00000380285 IGLV2-18A0A075B6J9 118 aa6.97□□□□□ -1.29
SNX1-202ENST00000380285 Q6ZSV7 163 aa6.96□□□□□ -1.29
SNX1-202ENST00000380285 GAS8-AS1O95177 125 aa6.96□□□□□ -1.29
SNX1-202ENST00000380285 C7orf33Q8WU49 177 aa6.96□□□□□ -1.29
SNX1-202ENST00000380285 BBC3Q96PG8 261 aaPredicted RBP6.96□□□□□ -1.29
SNX1-202ENST00000380285 CXCL6P80162 114 aa6.96□□□□□ -1.3
SNX1-202ENST00000380285 C10orf25Q5T742 122 aa6.95□□□□□ -1.3
SNX1-202ENST00000380285 WFDC10AQ9H1F0 79 aa6.95□□□□□ -1.3
SNX1-202ENST00000380285 CACNA1AO00555 2505 aa6.95□□□□□ -1.3
SNX1-202ENST00000380285 NRGNQ92686 78 aa6.95□□□□□ -1.3
SNX1-202ENST00000380285 LRCOL1A6NCL2 159 aa6.95□□□□□ -1.3
SNX1-202ENST00000380285 WISP2O76076 250 aa6.95□□□□□ -1.3
SNX1-202ENST00000380285 C22orf34Q6ZV56 151 aa6.95□□□□□ -1.3
SNX1-202ENST00000380285 WFDC13Q8IUB5 93 aa6.95□□□□□ -1.3
SNX1-202ENST00000380285 IGKV2-28A0A075B6P5 120 aa6.94□□□□□ -1.3
SNX1-202ENST00000380285 A0A096LNJ9 63 aa6.94□□□□□ -1.3
SNX1-202ENST00000380285 IGKV2D-28P01615 120 aa6.94□□□□□ -1.3
SNX1-202ENST00000380285 KPRPQ5T749 579 aaPredicted RBP6.94□□□□□ -1.3
SNX1-202ENST00000380285 RPS28P62857 69 aaKnown RBP6.94□□□□□ -1.3
SNX1-202ENST00000380285 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.94□□□□□ -1.3
SNX1-202ENST00000380285 TTC28Q96AY4 2481 aa6.94□□□□□ -1.3
SNX1-202ENST00000380285 FAM30AQ9NZY2 134 aa6.94□□□□□ -1.3
SNX1-202ENST00000380285 A0A1B0GUV1 79 aa6.93□□□□□ -1.3
SNX1-202ENST00000380285 CYSRT1A8MQ03 144 aa6.93□□□□□ -1.3
SNX1-202ENST00000380285 C10orf142B7Z368 130 aa6.93□□□□□ -1.3
SNX1-202ENST00000380285 BEAN1Q3B7T3 259 aa6.93□□□□□ -1.3
SNX1-202ENST00000380285 BDP1A6H8Y1 2624 aa6.93□□□□□ -1.3
SNX1-202ENST00000380285 TSPEAR-AS2P59090 65 aa6.93□□□□□ -1.3
SNX1-202ENST00000380285 A0A1B0GW54 56 aa6.93□□□□□ -1.3
SNX1-202ENST00000380285 C1orf137Q5JT78 98 aa6.93□□□□□ -1.3
SNX1-202ENST00000380285 Q8N3U1 123 aa6.93□□□□□ -1.3
SNX1-202ENST00000380285 A0A096LNI7 61 aa6.92□□□□□ -1.3
SNX1-202ENST00000380285 hDV103S1A0JD37 113 aa6.92□□□□□ -1.3
SNX1-202ENST00000380285 A0A087WYN8 130 aa6.91□□□□□ -1.3
SNX1-202ENST00000380285 CDIP1Q9H305 208 aa6.91□□□□□ -1.3
SNX1-202ENST00000380285 CRYGAP11844 174 aa6.91□□□□□ -1.3
SNX1-202ENST00000380285 ADAMTSL4-AS1Q5T5F5 129 aa6.91□□□□□ -1.3
SNX1-202ENST00000380285 MYO9AB2RTY4 2548 aa6.9□□□□□ -1.31
SNX1-202ENST00000380285 TMEM254Q8TBM7 123 aa6.9□□□□□ -1.31
SNX1-202ENST00000380285 C2orf48Q96LS8 159 aa6.9□□□□□ -1.31
SNX1-202ENST00000380285 LOC100131303A0A0U1RQF7 123 aa6.89□□□□□ -1.31
SNX1-202ENST00000380285 MYO18BQ8IUG5 2567 aa6.89□□□□□ -1.31
SNX1-202ENST00000380285 CUL9Q8IWT3 2517 aa6.89□□□□□ -1.31
SNX1-202ENST00000380285 LIMD2Q9BT23 127 aa6.89□□□□□ -1.31
SNX1-202ENST00000380285 C19orf84I3L1E1 186 aa6.89□□□□□ -1.31
SNX1-202ENST00000380285 COX6A2Q02221 97 aa6.89□□□□□ -1.31
SNX1-202ENST00000380285 REG3GQ6UW15 175 aa6.89□□□□□ -1.31
SNX1-202ENST00000380285 LINC00208Q96KT6 92 aa6.88□□□□□ -1.31
SNX1-202ENST00000380285 IGHV4-30-4P0DP06 118 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms