RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 TRBV20-1A0A075B6N2 111 aa15.21■□□□□ 0.03
TRIM54-202ENST00000380075 LOC107984156A0A0G2JMH3 177 aa15.21■□□□□ 0.03
TRIM54-202ENST00000380075 ARL17AQ8IVW1 177 aa15.21■□□□□ 0.03
TRIM54-202ENST00000380075 VPS25Q9BRG1 176 aa15.21■□□□□ 0.03
TRIM54-202ENST00000380075 PRO0461Q9UI25 63 aa15.2■□□□□ 0.02
TRIM54-202ENST00000380075 MIAQ16674 131 aa15.2■□□□□ 0.02
TRIM54-202ENST00000380075 RNF183Q96D59 192 aa15.2■□□□□ 0.02
TRIM54-202ENST00000380075 NBEAL1Q6ZS30 2694 aa15.19■□□□□ 0.02
TRIM54-202ENST00000380075 WIPF1O43516 503 aa15.19■□□□□ 0.02
TRIM54-202ENST00000380075 COX6A2Q02221 97 aa15.19■□□□□ 0.02
TRIM54-202ENST00000380075 NOTCH1P46531 2555 aa15.18■□□□□ 0.02
TRIM54-202ENST00000380075 LOC100131303A0A0U1RQF7 123 aa15.18■□□□□ 0.02
TRIM54-202ENST00000380075 IFITM1P13164 125 aa15.18■□□□□ 0.02
TRIM54-202ENST00000380075 WFDC2Q14508 124 aa15.18■□□□□ 0.02
TRIM54-202ENST00000380075 IGHV3-33P01772 117 aa15.17■□□□□ 0.02
TRIM54-202ENST00000380075 ERG28Q9UKR5 140 aa15.17■□□□□ 0.02
TRIM54-202ENST00000380075 DNAH3Q8TD57 4116 aa15.17■□□□□ 0.02
TRIM54-202ENST00000380075 TRAV13-1A0A0B4J241 112 aa15.16■□□□□ 0.02
TRIM54-202ENST00000380075 A8MZ25 164 aa15.16■□□□□ 0.02
TRIM54-202ENST00000380075 KRTAP10-11P60412 298 aa15.16■□□□□ 0.02
TRIM54-202ENST00000380075 CIRBPQ14011 172 aaKnown RBP15.16■□□□□ 0.02
TRIM54-202ENST00000380075 TRBV6-8A0A0A6YYG3 113 aa15.15■□□□□ 0.02
TRIM54-202ENST00000380075 SMIM1B2RUZ4 78 aa15.15■□□□□ 0.02
TRIM54-202ENST00000380075 PRSS2P07478 247 aa15.15■□□□□ 0.02
TRIM54-202ENST00000380075 PSMB2P49721 201 aa15.15■□□□□ 0.02
TRIM54-202ENST00000380075 X6R8D5 127 aa15.15■□□□□ 0.02
TRIM54-202ENST00000380075 ADAMTSL4-AS1Q5T5F5 129 aa15.15■□□□□ 0.02
TRIM54-202ENST00000380075 TEX48A0A1B0GUV7 120 aa15.14■□□□□ 0.01
TRIM54-202ENST00000380075 EIF4EBP3O60516 100 aaPredicted RBP15.14■□□□□ 0.01
TRIM54-202ENST00000380075 EGFEM1PQ0D2K5 195 aa15.14■□□□□ 0.01
TRIM54-202ENST00000380075 J3QR89 54 aa15.13■□□□□ 0.01
TRIM54-202ENST00000380075 F5H768 121 aa15.12■□□□□ 0.01
TRIM54-202ENST00000380075 SCGB1C2P0DMR2 95 aa15.12■□□□□ 0.01
TRIM54-202ENST00000380075 DEFB130BP0DP73 79 aa15.12■□□□□ 0.01
TRIM54-202ENST00000380075 DEFB130AP0DP74 79 aa15.12■□□□□ 0.01
TRIM54-202ENST00000380075 KPRPQ5T749 579 aaPredicted RBP15.12■□□□□ 0.01
TRIM54-202ENST00000380075 LYRM9A8MSI8 78 aa15.11■□□□□ 0.01
TRIM54-202ENST00000380075 SFTA2Q6UW10 78 aa15.11■□□□□ 0.01
TRIM54-202ENST00000380075 COPS9Q8WXC6 57 aa15.11■□□□□ 0.01
TRIM54-202ENST00000380075 TCL1BO95988 128 aa15.11■□□□□ 0.01
TRIM54-202ENST00000380075 APOC4P55056 127 aa15.11■□□□□ 0.01
TRIM54-202ENST00000380075 Q9H8V8 135 aa15.11■□□□□ 0.01
TRIM54-202ENST00000380075 PRB2P02812 416 aaPredicted RBP15.1■□□□□ 0.01
TRIM54-202ENST00000380075 HERV-K104P63124 156 aa15.1■□□□□ 0.01
TRIM54-202ENST00000380075 ATP6V0E2Q8NHE4 81 aa15.1■□□□□ 0.01
TRIM54-202ENST00000380075 ETDBQ3ZM63 59 aa15.09■□□□□ 0.01
TRIM54-202ENST00000380075 GAGE6Q13070 117 aa15.09■□□□□ 0.01
TRIM54-202ENST00000380075 TRBV30A0A0K0K1B3 111 aa15.08■□□□□ 0
TRIM54-202ENST00000380075 CHCHD5Q9BSY4 110 aa15.08■□□□□ 0
TRIM54-202ENST00000380075 PRO0255Q9UI72 69 aa15.08■□□□□ 0
TRIM54-202ENST00000380075 Q1RN00 199 aa15.07■□□□□ 0
TRIM54-202ENST00000380075 ZNF625Q96I27 306 aaPredicted RBP15.07■□□□□ 0
TRIM54-202ENST00000380075 SH2D6Q7Z4S9 175 aa15.07■□□□□ 0
TRIM54-202ENST00000380075 MTURNQ8N3F0 131 aa15.06■□□□□ 0
TRIM54-202ENST00000380075 PPDPFQ9H3Y8 114 aa15.06■□□□□ 0
TRIM54-202ENST00000380075 GYPEP15421 78 aa15.05■□□□□ 0
TRIM54-202ENST00000380075 SMCPP49901 116 aaPredicted RBP15.05■□□□□ -0
TRIM54-202ENST00000380075 FAM222AQ5U5X8 452 aa15.04■□□□□ -0
TRIM54-202ENST00000380075 MEGF8Q7Z7M0 2845 aa15.04■□□□□ -0
TRIM54-202ENST00000380075 H7C2G1 150 aa15.04■□□□□ -0
TRIM54-202ENST00000380075 IGLV4-60A0A075B6I1 120 aa15.03■□□□□ -0
TRIM54-202ENST00000380075 M0QXV9 152 aa15.03■□□□□ -0
TRIM54-202ENST00000380075 LINC00308Q8TCZ7 52 aa15.02■□□□□ -0
TRIM54-202ENST00000380075 PCP4P48539 62 aa15.02□□□□□ -0.01
TRIM54-202ENST00000380075 ATXN8Q156A1 80 aa15.02□□□□□ -0.01
TRIM54-202ENST00000380075 A0A1B0GUV1 79 aa15.01□□□□□ -0.01
TRIM54-202ENST00000380075 COX6CP09669 75 aa15.01□□□□□ -0.01
TRIM54-202ENST00000380075 DEFB135Q30KP9 77 aa15.01□□□□□ -0.01
TRIM54-202ENST00000380075 NPC2P61916 151 aa15□□□□□ -0.01
TRIM54-202ENST00000380075 MEIG1Q5JSS6 88 aa15□□□□□ -0.01
TRIM54-202ENST00000380075 ICOSQ9Y6W8 199 aa15□□□□□ -0.01
TRIM54-202ENST00000380075 FBN3Q75N90 2809 aa15□□□□□ -0.01
TRIM54-202ENST00000380075 IGHV3OR16-9A0A0B4J2B5 98 aa14.99□□□□□ -0.01
TRIM54-202ENST00000380075 PAX4O43316 350 aa14.99□□□□□ -0.01
TRIM54-202ENST00000380075 TRIAP1O43715 76 aa14.99□□□□□ -0.01
TRIM54-202ENST00000380075 MIFP14174 115 aa14.99□□□□□ -0.01
TRIM54-202ENST00000380075 DAND5Q8N907 189 aa14.99□□□□□ -0.01
TRIM54-202ENST00000380075 COX7B2Q8TF08 81 aa14.99□□□□□ -0.01
TRIM54-202ENST00000380075 TEN1Q86WV5 123 aa14.98□□□□□ -0.01
TRIM54-202ENST00000380075 K7EIL1 84 aa14.98□□□□□ -0.01
TRIM54-202ENST00000380075 A0A087WZ39 114 aa14.97□□□□□ -0.01
TRIM54-202ENST00000380075 IGHV4-28A0A0C4DH34 117 aa14.97□□□□□ -0.01
TRIM54-202ENST00000380075 FOXI1Q12951 378 aa14.97□□□□□ -0.01
TRIM54-202ENST00000380075 LINC00959A0A1B0GUT2 108 aa14.96□□□□□ -0.01
TRIM54-202ENST00000380075 RPL13AP40429 203 aaKnown RBP14.96□□□□□ -0.01
TRIM54-202ENST00000380075 IGKV3OR2-268A0A0C4DH90 116 aa14.95□□□□□ -0.02
TRIM54-202ENST00000380075 SLC25A20O43772 301 aa14.95□□□□□ -0.02
TRIM54-202ENST00000380075 DAD1P61803 113 aa14.95□□□□□ -0.02
TRIM54-202ENST00000380075 PPDPFLQ8WWR9 84 aa14.95□□□□□ -0.02
TRIM54-202ENST00000380075 LINC01600Q96MT4 127 aa14.95□□□□□ -0.02
TRIM54-202ENST00000380075 C9JAW5 83 aa14.94□□□□□ -0.02
TRIM54-202ENST00000380075 LINC01620Q4KN68 170 aa14.94□□□□□ -0.02
TRIM54-202ENST00000380075 TRAV26-1A0A087WT03 109 aa14.93□□□□□ -0.02
TRIM54-202ENST00000380075 TMEM262E9PQX1 116 aa14.93□□□□□ -0.02
TRIM54-202ENST00000380075 Q8NAQ8 132 aa14.93□□□□□ -0.02
TRIM54-202ENST00000380075 SS18Q15532 418 aa14.93□□□□□ -0.02
TRIM54-202ENST00000380075 DEFB121Q5J5C9 76 aa14.93□□□□□ -0.02
TRIM54-202ENST00000380075 LINC01561Q8N1V8 128 aa14.93□□□□□ -0.02
TRIM54-202ENST00000380075 ATP5G1P05496 136 aa14.92□□□□□ -0.02
TRIM54-202ENST00000380075 SOSTDC1Q6X4U4 206 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms