RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 VWFP04275 2813 aa10.61□□□□□ -0.71
PRNP-201ENST00000379440 LINC00526Q96FQ7 95 aa10.61□□□□□ -0.71
PRNP-201ENST00000379440 C16orf74Q96GX8 76 aa10.61□□□□□ -0.71
PRNP-201ENST00000379440 TMEM223A0PJW6 202 aa10.6□□□□□ -0.71
PRNP-201ENST00000379440 DAZ2Q13117 558 aaKnown RBP10.6□□□□□ -0.71
PRNP-201ENST00000379440 SLC25A29Q8N8R3 303 aa10.6□□□□□ -0.71
PRNP-201ENST00000379440 TCL1BO95988 128 aa10.6□□□□□ -0.71
PRNP-201ENST00000379440 J3QQQ9 107 aa10.59□□□□□ -0.71
PRNP-201ENST00000379440 K7EQD1 137 aa10.59□□□□□ -0.71
PRNP-201ENST00000379440 GAGE2AQ6NT46 116 aa10.59□□□□□ -0.71
PRNP-201ENST00000379440 C1orf43Q9BWL3 253 aa10.59□□□□□ -0.71
PRNP-201ENST00000379440 SPANXDQ9BXN6 97 aa10.59□□□□□ -0.71
PRNP-201ENST00000379440 TRGV2A0A075B6R0 118 aa10.58□□□□□ -0.72
PRNP-201ENST00000379440 TINCRA0A1B0GVN0 87 aa10.58□□□□□ -0.72
PRNP-201ENST00000379440 SLC25A20O43772 301 aa10.58□□□□□ -0.72
PRNP-201ENST00000379440 PRO0628Q9UI54 55 aa10.58□□□□□ -0.72
PRNP-201ENST00000379440 TENM1Q9UKZ4 2725 aa10.58□□□□□ -0.72
PRNP-201ENST00000379440 A0A0J9YY99 117 aa10.57□□□□□ -0.72
PRNP-201ENST00000379440 RPL36AP83881 106 aaKnown RBP10.57□□□□□ -0.72
PRNP-201ENST00000379440 SRSF9Q13242 221 aaKnown RBP eCLIP10.57□□□□□ -0.72
PRNP-201ENST00000379440 RPL36ALQ969Q0 106 aaKnown RBP10.57□□□□□ -0.72
PRNP-201ENST00000379440 FAM236AA0A1B0GUQ0 79 aa10.57□□□□□ -0.72
PRNP-201ENST00000379440 FAM236BA0A1B0GV22 79 aa10.57□□□□□ -0.72
PRNP-201ENST00000379440 LGALS3P17931 250 aaKnown RBP10.57□□□□□ -0.72
PRNP-201ENST00000379440 MRPS36P82909 103 aaKnown RBP10.57□□□□□ -0.72
PRNP-201ENST00000379440 MALP21145 153 aa10.56□□□□□ -0.72
PRNP-201ENST00000379440 LEPROTO15243 131 aa10.56□□□□□ -0.72
PRNP-201ENST00000379440 UBE2D1P51668 147 aa10.56□□□□□ -0.72
PRNP-201ENST00000379440 NTM-AS1Q6ZSK4 140 aa10.56□□□□□ -0.72
PRNP-201ENST00000379440 OVOL2Q9BRP0 275 aa10.56□□□□□ -0.72
PRNP-201ENST00000379440 TRBV10-1A0A0K0K1A3 114 aa10.55□□□□□ -0.72
PRNP-201ENST00000379440 TRBV7-7A0A0K0K1E9 115 aa10.55□□□□□ -0.72
PRNP-201ENST00000379440 LOC100131303A0A0U1RQF7 123 aa10.55□□□□□ -0.72
PRNP-201ENST00000379440 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.55□□□□□ -0.72
PRNP-201ENST00000379440 TRAV8-3A0A0A6YYJ7 113 aa10.54□□□□□ -0.72
PRNP-201ENST00000379440 DGAT2L7PQ6IED9 249 aa10.54□□□□□ -0.72
PRNP-201ENST00000379440 NTN5Q8WTR8 489 aaPredicted RBP10.54□□□□□ -0.72
PRNP-201ENST00000379440 V9GYY9 64 aa10.54□□□□□ -0.72
PRNP-201ENST00000379440 IGHV3-30-3P0DP02 117 aa10.53□□□□□ -0.72
PRNP-201ENST00000379440 DAZ4Q86SG3 579 aaKnown RBP10.53□□□□□ -0.72
PRNP-201ENST00000379440 DAZ3Q9NR90 486 aaKnown RBP10.53□□□□□ -0.72
PRNP-201ENST00000379440 DPH3Q96FX2 82 aa10.52□□□□□ -0.72
PRNP-201ENST00000379440 TIMM21Q9BVV7 248 aa10.52□□□□□ -0.72
PRNP-201ENST00000379440 TRGV4A0A0C4DH28 118 aa10.52□□□□□ -0.73
PRNP-201ENST00000379440 A8MZ25 164 aa10.52□□□□□ -0.73
PRNP-201ENST00000379440 C9orf66Q5T8R8 295 aa10.52□□□□□ -0.73
PRNP-201ENST00000379440 IMUPQ9GZP8 106 aa10.51□□□□□ -0.73
PRNP-201ENST00000379440 ATRQ13535 2644 aa10.51□□□□□ -0.73
PRNP-201ENST00000379440 Q5XG85 94 aa10.51□□□□□ -0.73
PRNP-201ENST00000379440 DEFB130BP0DP73 79 aa10.51□□□□□ -0.73
PRNP-201ENST00000379440 DEFB130AP0DP74 79 aa10.51□□□□□ -0.73
PRNP-201ENST00000379440 TRRAPQ9Y4A5 3859 aa10.5□□□□□ -0.73
PRNP-201ENST00000379440 NBEAL2Q6ZNJ1 2754 aa10.5□□□□□ -0.73
PRNP-201ENST00000379440 IGHV3-30P01768 117 aa10.5□□□□□ -0.73
PRNP-201ENST00000379440 IGHV3-30-5P0DP03 117 aa10.5□□□□□ -0.73
PRNP-201ENST00000379440 CRYGAP11844 174 aa10.5□□□□□ -0.73
PRNP-201ENST00000379440 RPL13AP40429 203 aaKnown RBP10.5□□□□□ -0.73
PRNP-201ENST00000379440 FHL2Q14192 279 aa10.5□□□□□ -0.73
PRNP-201ENST00000379440 TRBV6-4A0A1B0GX49 114 aa10.5□□□□□ -0.73
PRNP-201ENST00000379440 TRACP01848 142 aa10.5□□□□□ -0.73
PRNP-201ENST00000379440 ATP5G1P05496 136 aa10.5□□□□□ -0.73
PRNP-201ENST00000379440 CDKN2A-AS1Q9UH64 79 aa10.5□□□□□ -0.73
PRNP-201ENST00000379440 IGHV1-58A0A0C4DH39 117 aa10.49□□□□□ -0.73
PRNP-201ENST00000379440 COX6A2Q02221 97 aa10.49□□□□□ -0.73
PRNP-201ENST00000379440 PKIGQ9Y2B9 76 aa10.49□□□□□ -0.73
PRNP-201ENST00000379440 COX7CP15954 63 aa10.49□□□□□ -0.73
PRNP-201ENST00000379440 X6R8D5 127 aa10.49□□□□□ -0.73
PRNP-201ENST00000379440 A0A0U1RRA0 63 aa10.48□□□□□ -0.73
PRNP-201ENST00000379440 TIRAPP58753 221 aa10.48□□□□□ -0.73
PRNP-201ENST00000379440 TEP1Q99973 2627 aaKnown RBP10.48□□□□□ -0.73
PRNP-201ENST00000379440 TEX49A0A1B0GTD5 131 aa10.48□□□□□ -0.73
PRNP-201ENST00000379440 VSIG2Q96IQ7 327 aa10.48□□□□□ -0.73
PRNP-201ENST00000379440 A0A0J9YXY3 114 aa10.47□□□□□ -0.73
PRNP-201ENST00000379440 TMEM258P61165 79 aa10.47□□□□□ -0.73
PRNP-201ENST00000379440 TRAV13-1A0A0B4J241 112 aa10.46□□□□□ -0.73
PRNP-201ENST00000379440 LINC00242Q5T6M2 205 aa10.46□□□□□ -0.73
PRNP-201ENST00000379440 LINC01600Q96MT4 127 aa10.46□□□□□ -0.74
PRNP-201ENST00000379440 TMEM243Q9BU79 118 aa10.46□□□□□ -0.74
PRNP-201ENST00000379440 CDC42SE2Q9NRR3 84 aa10.46□□□□□ -0.74
PRNP-201ENST00000379440 FAM240AA0A1B0GVK7 77 aa10.45□□□□□ -0.74
PRNP-201ENST00000379440 UBE2WQ96B02 151 aa10.45□□□□□ -0.74
PRNP-201ENST00000379440 NDUFA12Q9UI09 145 aa10.45□□□□□ -0.74
PRNP-201ENST00000379440 UBE2L6O14933 153 aa10.45□□□□□ -0.74
PRNP-201ENST00000379440 DEFB135Q30KP9 77 aa10.45□□□□□ -0.74
PRNP-201ENST00000379440 DEFB4AO15263 64 aa10.44□□□□□ -0.74
PRNP-201ENST00000379440 CFC1BP0CG36 223 aa10.44□□□□□ -0.74
PRNP-201ENST00000379440 CFC1P0CG37 223 aa10.44□□□□□ -0.74
PRNP-201ENST00000379440 MUSTN1Q8IVN3 82 aa10.44□□□□□ -0.74
PRNP-201ENST00000379440 IGLV5-45A0A087WSX0 123 aa10.44□□□□□ -0.74
PRNP-201ENST00000379440 LINC00612Q8N6U2 182 aa10.43□□□□□ -0.74
PRNP-201ENST00000379440 hADV29S1A0JD25 119 aa10.43□□□□□ -0.74
PRNP-201ENST00000379440 F8P00451 2351 aa10.43□□□□□ -0.74
PRNP-201ENST00000379440 ZNF561-AS1K7EIQ3 104 aa10.42□□□□□ -0.74
PRNP-201ENST00000379440 OXTP01178 125 aa10.42□□□□□ -0.74
PRNP-201ENST00000379440 ADAMTSL4-AS1Q5T5F5 129 aa10.42□□□□□ -0.74
PRNP-201ENST00000379440 LITAFQ99732 161 aa10.42□□□□□ -0.74
PRNP-201ENST00000379440 FAM222AQ5U5X8 452 aa10.42□□□□□ -0.74
PRNP-201ENST00000379440 EIF4EBP3O60516 100 aaPredicted RBP10.41□□□□□ -0.74
PRNP-201ENST00000379440 LINC00336Q6ZUF6 198 aa10.41□□□□□ -0.74
PRNP-201ENST00000379440 FLNBO75369 2602 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms