RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 TENM3Q9P273 2699 aa12.22□□□□□ -0.45
LYSMD4-203ENST00000378904 PGPEP1Q9NXJ5 209 aa12.22□□□□□ -0.45
LYSMD4-203ENST00000378904 C11orf86A6NJI1 115 aa12.21□□□□□ -0.45
LYSMD4-203ENST00000378904 MRPS36P82909 103 aaKnown RBP12.21□□□□□ -0.45
LYSMD4-203ENST00000378904 Q6ZTC4 211 aa12.21□□□□□ -0.45
LYSMD4-203ENST00000378904 FOXI1Q12951 378 aa12.2□□□□□ -0.46
LYSMD4-203ENST00000378904 CSDC2Q9Y534 153 aaKnown RBP12.2□□□□□ -0.46
LYSMD4-203ENST00000378904 H7C423 109 aa12.2□□□□□ -0.46
LYSMD4-203ENST00000378904 APOMO95445 188 aa12.2□□□□□ -0.46
LYSMD4-203ENST00000378904 C11orf45Q8TAV5 145 aa12.19□□□□□ -0.46
LYSMD4-203ENST00000378904 TMEM238LA0A1B0GVL6 79 aa12.19□□□□□ -0.46
LYSMD4-203ENST00000378904 A6NJY4 79 aa12.19□□□□□ -0.46
LYSMD4-203ENST00000378904 PLEKHB2Q96CS7 222 aa12.19□□□□□ -0.46
LYSMD4-203ENST00000378904 CDIP1Q9H305 208 aa12.19□□□□□ -0.46
LYSMD4-203ENST00000378904 ZNF815PA8K554 130 aa12.18□□□□□ -0.46
LYSMD4-203ENST00000378904 NANOS2P60321 138 aaKnown RBP12.18□□□□□ -0.46
LYSMD4-203ENST00000378904 GAGE6Q13070 117 aa12.18□□□□□ -0.46
LYSMD4-203ENST00000378904 MRPL23Q16540 153 aaKnown RBP12.18□□□□□ -0.46
LYSMD4-203ENST00000378904 NFE4Q86UQ8 179 aa12.18□□□□□ -0.46
LYSMD4-203ENST00000378904 CHCHD5Q9BSY4 110 aa12.18□□□□□ -0.46
LYSMD4-203ENST00000378904 A0A0J9YXV3 536 aa12.17□□□□□ -0.46
LYSMD4-203ENST00000378904 TSPAN13O95857 204 aa12.17□□□□□ -0.46
LYSMD4-203ENST00000378904 ICOSQ9Y6W8 199 aa12.17□□□□□ -0.46
LYSMD4-203ENST00000378904 TMEM101Q96IK0 257 aa12.16□□□□□ -0.46
LYSMD4-203ENST00000378904 CDC42SE2Q9NRR3 84 aa12.16□□□□□ -0.46
LYSMD4-203ENST00000378904 CKS1BP61024 79 aa12.16□□□□□ -0.46
LYSMD4-203ENST00000378904 TMEM170BQ5T4T1 132 aa12.15□□□□□ -0.46
LYSMD4-203ENST00000378904 HUWE1Q7Z6Z7 4374 aaKnown RBP12.15□□□□□ -0.46
LYSMD4-203ENST00000378904 SCGB1D4Q6XE38 83 aa12.14□□□□□ -0.47
LYSMD4-203ENST00000378904 H3BNG1 76 aa12.13□□□□□ -0.47
LYSMD4-203ENST00000378904 SRSF9Q13242 221 aaKnown RBP eCLIP12.13□□□□□ -0.47
LYSMD4-203ENST00000378904 ZNF22P17026 224 aaPredicted RBP12.13□□□□□ -0.47
LYSMD4-203ENST00000378904 PSMB2P49721 201 aa12.13□□□□□ -0.47
LYSMD4-203ENST00000378904 CARD19Q96LW7 228 aa12.13□□□□□ -0.47
LYSMD4-203ENST00000378904 IGLV4-60A0A075B6I1 120 aa12.12□□□□□ -0.47
LYSMD4-203ENST00000378904 DEFB131BA0A096LNP1 70 aa12.12□□□□□ -0.47
LYSMD4-203ENST00000378904 TINCRA0A1B0GVN0 87 aa12.11□□□□□ -0.47
LYSMD4-203ENST00000378904 HERVK_113P61574 105 aa12.11□□□□□ -0.47
LYSMD4-203ENST00000378904 LYRM7Q5U5X0 104 aa12.11□□□□□ -0.47
LYSMD4-203ENST00000378904 TMEM262E9PQX1 116 aa12.11□□□□□ -0.47
LYSMD4-203ENST00000378904 KRTAP21-3Q3LHN1 58 aa12.11□□□□□ -0.47
LYSMD4-203ENST00000378904 LOC107984156A0A0G2JMH3 177 aa12.1□□□□□ -0.47
LYSMD4-203ENST00000378904 TEN1Q86WV5 123 aa12.1□□□□□ -0.47
LYSMD4-203ENST00000378904 ARL17AQ8IVW1 177 aa12.1□□□□□ -0.47
LYSMD4-203ENST00000378904 PPDPFLQ8WWR9 84 aa12.1□□□□□ -0.47
LYSMD4-203ENST00000378904 B9D2Q9BPU9 175 aa12.1□□□□□ -0.47
LYSMD4-203ENST00000378904 IGHV3-30P01768 117 aa12.1□□□□□ -0.47
LYSMD4-203ENST00000378904 IGHV3-30-5P0DP03 117 aa12.1□□□□□ -0.47
LYSMD4-203ENST00000378904 TRBV20-1A0A075B6N2 111 aa12.09□□□□□ -0.47
LYSMD4-203ENST00000378904 TRAV13-1A0A0B4J241 112 aa12.09□□□□□ -0.47
LYSMD4-203ENST00000378904 TMEM223A0PJW6 202 aa12.09□□□□□ -0.47
LYSMD4-203ENST00000378904 TCL1BO95988 128 aa12.09□□□□□ -0.47
LYSMD4-203ENST00000378904 CFC1BP0CG36 223 aa12.09□□□□□ -0.47
LYSMD4-203ENST00000378904 CFC1P0CG37 223 aa12.09□□□□□ -0.47
LYSMD4-203ENST00000378904 A0A1B0GUV1 79 aa12.08□□□□□ -0.47
LYSMD4-203ENST00000378904 MT-ATP8P03928 68 aa12.08□□□□□ -0.47
LYSMD4-203ENST00000378904 SPINK8P0C7L1 97 aa12.08□□□□□ -0.47
LYSMD4-203ENST00000378904 LELP1Q5T871 98 aa12.08□□□□□ -0.47
LYSMD4-203ENST00000378904 GEMIN7Q9H840 131 aaKnown RBP12.08□□□□□ -0.47
LYSMD4-203ENST00000378904 DNHD1Q96M86 4753 aa12.08□□□□□ -0.48
LYSMD4-203ENST00000378904 XGP55808 180 aa12.08□□□□□ -0.48
LYSMD4-203ENST00000378904 TIRAPP58753 221 aa12.08□□□□□ -0.48
LYSMD4-203ENST00000378904 TSPEAR-AS2P59090 65 aa12.08□□□□□ -0.48
LYSMD4-203ENST00000378904 LINC00242Q5T6M2 205 aa12.08□□□□□ -0.48
LYSMD4-203ENST00000378904 SFTA2Q6UW10 78 aa12.08□□□□□ -0.48
LYSMD4-203ENST00000378904 FAM19A3Q7Z5A8 133 aa12.08□□□□□ -0.48
LYSMD4-203ENST00000378904 LYPD5Q6UWN5 251 aa12.07□□□□□ -0.48
LYSMD4-203ENST00000378904 TRAV10A0A0B4J240 114 aa12.07□□□□□ -0.48
LYSMD4-203ENST00000378904 COX6A2Q02221 97 aa12.07□□□□□ -0.48
LYSMD4-203ENST00000378904 C10orf126Q8N4M7 172 aa12.07□□□□□ -0.48
LYSMD4-203ENST00000378904 IGLV5-45A0A087WSX0 123 aa12.05□□□□□ -0.48
LYSMD4-203ENST00000378904 HERVK_113P63121 156 aa12.05□□□□□ -0.48
LYSMD4-203ENST00000378904 DNAH9Q9NYC9 4486 aa12.05□□□□□ -0.48
LYSMD4-203ENST00000378904 IGHV3-64A0A075B6Q5 118 aa12.05□□□□□ -0.48
LYSMD4-203ENST00000378904 IGKV3OR2-268A0A0C4DH90 116 aa12.05□□□□□ -0.48
LYSMD4-203ENST00000378904 CDKN2A-AS1Q9UH64 79 aa12.05□□□□□ -0.48
LYSMD4-203ENST00000378904 M0QXV9 152 aa12.04□□□□□ -0.48
LYSMD4-203ENST00000378904 PRO1854Q9UHT4 67 aa12.04□□□□□ -0.48
LYSMD4-203ENST00000378904 LEPROTO15243 131 aa12.03□□□□□ -0.48
LYSMD4-203ENST00000378904 Q8N3U1 123 aa12.03□□□□□ -0.48
LYSMD4-203ENST00000378904 TRAV8-3A0A0A6YYJ7 113 aa12.02□□□□□ -0.48
LYSMD4-203ENST00000378904 J3QQQ9 107 aa12.02□□□□□ -0.48
LYSMD4-203ENST00000378904 EIF4EBP3O60516 100 aaPredicted RBP12.02□□□□□ -0.49
LYSMD4-203ENST00000378904 IGHV1-58A0A0C4DH39 117 aa12.01□□□□□ -0.49
LYSMD4-203ENST00000378904 ANKRD29Q8N6D5 301 aa12.01□□□□□ -0.49
LYSMD4-203ENST00000378904 IGHV3-30-3P0DP02 117 aa12.01□□□□□ -0.49
LYSMD4-203ENST00000378904 LGALS3P17931 250 aaKnown RBP12.01□□□□□ -0.49
LYSMD4-203ENST00000378904 SVIPQ8NHG7 77 aa12.01□□□□□ -0.49
LYSMD4-203ENST00000378904 LINC00959A0A1B0GUT2 108 aa12□□□□□ -0.49
LYSMD4-203ENST00000378904 ESRGQ1W209 222 aa12□□□□□ -0.49
LYSMD4-203ENST00000378904 ANGP03950 147 aaKnown RBP11.99□□□□□ -0.49
LYSMD4-203ENST00000378904 CLPSL2Q6UWE3 100 aa11.99□□□□□ -0.49
LYSMD4-203ENST00000378904 IGHV3-33P01772 117 aa11.99□□□□□ -0.49
LYSMD4-203ENST00000378904 LINC00269Q8N2A0 174 aa11.99□□□□□ -0.49
LYSMD4-203ENST00000378904 ERG28Q9UKR5 140 aa11.99□□□□□ -0.49
LYSMD4-203ENST00000378904 COL7A1Q02388 2944 aa11.98□□□□□ -0.49
LYSMD4-203ENST00000378904 C15orf53Q8NAA6 179 aa11.98□□□□□ -0.49
LYSMD4-203ENST00000378904 A0A0B4J2C4 111 aa11.98□□□□□ -0.49
LYSMD4-203ENST00000378904 A4D1N5 150 aa11.98□□□□□ -0.49
LYSMD4-203ENST00000378904 LINC01600Q96MT4 127 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms