RNA–Protein interactions for RNA: ENST00000377139.7

IRF3-203, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-203ENST00000377139 IGHV3-30P01768 117 aa12.35□□□□□ -0.43
IRF3-203ENST00000377139 IGHV3-33P01772 117 aa12.35□□□□□ -0.43
IRF3-203ENST00000377139 IGHV3-30-3P0DP02 117 aa12.35□□□□□ -0.43
IRF3-203ENST00000377139 IGHV3-30-5P0DP03 117 aa12.35□□□□□ -0.43
IRF3-203ENST00000377139 LINC01556Q5JQF7 62 aa12.35□□□□□ -0.43
IRF3-203ENST00000377139 KLK12Q9UKR0 248 aa12.35□□□□□ -0.43
IRF3-203ENST00000377139 TRAV8-3A0A0A6YYJ7 113 aa12.34□□□□□ -0.43
IRF3-203ENST00000377139 IGHV3OR16-9A0A0B4J2B5 98 aa12.34□□□□□ -0.43
IRF3-203ENST00000377139 MAPKAPK5-AS1Q8N8E1 139 aa12.34□□□□□ -0.43
IRF3-203ENST00000377139 LINC00588Q9Y4M8 146 aa12.34□□□□□ -0.43
IRF3-203ENST00000377139 ZNF815PA8K554 130 aa12.33□□□□□ -0.43
IRF3-203ENST00000377139 CRPP02741 224 aa12.33□□□□□ -0.43
IRF3-203ENST00000377139 CTAG1AP78358 180 aa12.33□□□□□ -0.43
IRF3-203ENST00000377139 C2orf91Q6ZV80 131 aa12.33□□□□□ -0.43
IRF3-203ENST00000377139 KLK5Q9Y337 293 aaPredicted RBP12.33□□□□□ -0.43
IRF3-203ENST00000377139 COL7A1Q02388 2944 aa12.33□□□□□ -0.44
IRF3-203ENST00000377139 IGLV5-39A0A0G2JS06 123 aa12.33□□□□□ -0.44
IRF3-203ENST00000377139 SMIM1B2RUZ4 78 aa12.33□□□□□ -0.44
IRF3-203ENST00000377139 DNAH10OSP0CZ25 163 aa12.33□□□□□ -0.44
IRF3-203ENST00000377139 TSPEAR-AS2P59090 65 aa12.33□□□□□ -0.44
IRF3-203ENST00000377139 A0A087WZ39 114 aa12.32□□□□□ -0.44
IRF3-203ENST00000377139 XCL1P47992 114 aa12.32□□□□□ -0.44
IRF3-203ENST00000377139 UPK3BQ9BT76 320 aa12.32□□□□□ -0.44
IRF3-203ENST00000377139 HIGD1BQ9P298 99 aa12.32□□□□□ -0.44
IRF3-203ENST00000377139 CD164L2Q6UWJ8 174 aa12.31□□□□□ -0.44
IRF3-203ENST00000377139 APLNQ9ULZ1 77 aa12.31□□□□□ -0.44
IRF3-203ENST00000377139 TRAV8-4A0A0B4J246 113 aa12.3□□□□□ -0.44
IRF3-203ENST00000377139 ENHOQ6UWT2 76 aa12.3□□□□□ -0.44
IRF3-203ENST00000377139 LINC01561Q8N1V8 128 aa12.3□□□□□ -0.44
IRF3-203ENST00000377139 CHCHD10Q8WYQ3 142 aaPredicted RBP12.3□□□□□ -0.44
IRF3-203ENST00000377139 MIAQ16674 131 aa12.29□□□□□ -0.44
IRF3-203ENST00000377139 ZFAND6Q6FIF0 208 aa12.29□□□□□ -0.44
IRF3-203ENST00000377139 SCGB1D4Q6XE38 83 aa12.29□□□□□ -0.44
IRF3-203ENST00000377139 UBE2WQ96B02 151 aa12.29□□□□□ -0.44
IRF3-203ENST00000377139 MEGF8Q7Z7M0 2845 aa12.28□□□□□ -0.44
IRF3-203ENST00000377139 IGLV10-54A0A075B6I4 117 aa12.28□□□□□ -0.44
IRF3-203ENST00000377139 C5orf38Q86SI9 138 aa12.28□□□□□ -0.44
IRF3-203ENST00000377139 PRKDCP78527 4128 aaKnown RBP12.28□□□□□ -0.44
IRF3-203ENST00000377139 NDUFA12Q9UI09 145 aa12.27□□□□□ -0.44
IRF3-203ENST00000377139 M0R143 59 aa12.26□□□□□ -0.45
IRF3-203ENST00000377139 COX7A2LO14548 114 aa12.26□□□□□ -0.45
IRF3-203ENST00000377139 STAB2Q8WWQ8 2551 aa12.26□□□□□ -0.45
IRF3-203ENST00000377139 HSD52Q0P140 79 aa12.26□□□□□ -0.45
IRF3-203ENST00000377139 NDUFA1O15239 70 aa12.24□□□□□ -0.45
IRF3-203ENST00000377139 FOXI1Q12951 378 aa12.24□□□□□ -0.45
IRF3-203ENST00000377139 UBE2DNLQ8IWF7 75 aa12.24□□□□□ -0.45
IRF3-203ENST00000377139 C10orf126Q8N4M7 172 aa12.24□□□□□ -0.45
IRF3-203ENST00000377139 GAGE12HA6NDE8 117 aa12.23□□□□□ -0.45
IRF3-203ENST00000377139 K7EP13 123 aa12.23□□□□□ -0.45
IRF3-203ENST00000377139 MALP21145 153 aa12.23□□□□□ -0.45
IRF3-203ENST00000377139 COX7B2Q8TF08 81 aa12.23□□□□□ -0.45
IRF3-203ENST00000377139 TAL2Q16559 108 aa12.22□□□□□ -0.45
IRF3-203ENST00000377139 SNHG12Q9BXW3 62 aa12.22□□□□□ -0.45
IRF3-203ENST00000377139 Q9H8V8 135 aa12.22□□□□□ -0.45
IRF3-203ENST00000377139 HINT1P49773 126 aaPredicted RBP12.22□□□□□ -0.45
IRF3-203ENST00000377139 TOMM7Q9P0U1 55 aa12.22□□□□□ -0.45
IRF3-203ENST00000377139 A0A0J9YXY3 114 aa12.21□□□□□ -0.46
IRF3-203ENST00000377139 IBA57-AS1B1ANH7 110 aa12.21□□□□□ -0.46
IRF3-203ENST00000377139 APOMO95445 188 aa12.21□□□□□ -0.46
IRF3-203ENST00000377139 SFTA2Q6UW10 78 aa12.21□□□□□ -0.46
IRF3-203ENST00000377139 C1orf43Q9BWL3 253 aa12.21□□□□□ -0.46
IRF3-203ENST00000377139 HERV-K104P63124 156 aa12.2□□□□□ -0.46
IRF3-203ENST00000377139 Q8IZM0 81 aa12.2□□□□□ -0.46
IRF3-203ENST00000377139 HIST1H4GQ99525 98 aa12.2□□□□□ -0.46
IRF3-203ENST00000377139 SPANXB1Q9NS25 103 aaPredicted RBP12.2□□□□□ -0.46
IRF3-203ENST00000377139 TMEM238C9JI98 176 aa12.19□□□□□ -0.46
IRF3-203ENST00000377139 EREGO14944 169 aa12.19□□□□□ -0.46
IRF3-203ENST00000377139 PRSS2P07478 247 aa12.19□□□□□ -0.46
IRF3-203ENST00000377139 BATFQ16520 125 aa12.19□□□□□ -0.46
IRF3-203ENST00000377139 BVES-AS1Q5T3Y7 98 aa12.19□□□□□ -0.46
IRF3-203ENST00000377139 ZNF625Q96I27 306 aaPredicted RBP12.19□□□□□ -0.46
IRF3-203ENST00000377139 LBHQ53QV2 105 aaPredicted RBP12.19□□□□□ -0.46
IRF3-203ENST00000377139 SRSF9Q13242 221 aaKnown RBP eCLIP12.18□□□□□ -0.46
IRF3-203ENST00000377139 ORAOV1Q8WV07 137 aa12.18□□□□□ -0.46
IRF3-203ENST00000377139 TIMM17BO60830 172 aa12.17□□□□□ -0.46
IRF3-203ENST00000377139 C6orf226Q5I0X4 101 aa12.17□□□□□ -0.46
IRF3-203ENST00000377139 IGKV2D-24A0A075B6R9 120 aa12.16□□□□□ -0.46
IRF3-203ENST00000377139 CXCL5P42830 114 aa12.16□□□□□ -0.46
IRF3-203ENST00000377139 CIRBPQ14011 172 aaKnown RBP12.16□□□□□ -0.46
IRF3-203ENST00000377139 KRTAP26-1Q6PEX3 210 aa12.16□□□□□ -0.46
IRF3-203ENST00000377139 CEND1Q8N111 149 aa12.16□□□□□ -0.46
IRF3-203ENST00000377139 MUC7Q8TAX7 377 aa12.16□□□□□ -0.46
IRF3-203ENST00000377139 RMI2Q96E14 147 aa12.16□□□□□ -0.46
IRF3-203ENST00000377139 GCSHP23434 173 aa12.15□□□□□ -0.46
IRF3-203ENST00000377139 TM2D2Q9BX73 214 aa12.15□□□□□ -0.46
IRF3-203ENST00000377139 CFAP161Q6P656 301 aa12.15□□□□□ -0.47
IRF3-203ENST00000377139 Q9HAA7 133 aa12.15□□□□□ -0.47
IRF3-203ENST00000377139 DYNC2H1Q8NCM8 4307 aaKnown RBP12.15□□□□□ -0.47
IRF3-203ENST00000377139 Q6ZVH6 145 aa12.14□□□□□ -0.47
IRF3-203ENST00000377139 WWC2-AS2Q96NR7 200 aa12.14□□□□□ -0.47
IRF3-203ENST00000377139 CKS1BP61024 79 aa12.13□□□□□ -0.47
IRF3-203ENST00000377139 MEIG1Q5JSS6 88 aa12.13□□□□□ -0.47
IRF3-203ENST00000377139 LITAFQ99732 161 aa12.13□□□□□ -0.47
IRF3-203ENST00000377139 SPANXDQ9BXN6 97 aa12.13□□□□□ -0.47
IRF3-203ENST00000377139 SPANXCQ9NY87 97 aa12.13□□□□□ -0.47
IRF3-203ENST00000377139 SPAG11BQ08648 103 aa12.12□□□□□ -0.47
IRF3-203ENST00000377139 KIAA0087Q14695 138 aa12.12□□□□□ -0.47
IRF3-203ENST00000377139 COL5A1-AS1Q5SY13 56 aa12.12□□□□□ -0.47
IRF3-203ENST00000377139 PTTG1IPP53801 180 aa12.11□□□□□ -0.47
IRF3-203ENST00000377139 COX11Q9Y6N1 276 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms