RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 LINC00308Q8TCZ7 52 aa9.23□□□□□ -0.93
USP11-204ENST00000377107 HTN3P15516 51 aa9.22□□□□□ -0.93
USP11-204ENST00000377107 TRBV10-2A0A0K0K1G8 114 aa9.21□□□□□ -0.93
USP11-204ENST00000377107 SMIM1B2RUZ4 78 aa9.21□□□□□ -0.93
USP11-204ENST00000377107 DAZ2Q13117 558 aaKnown RBP9.21□□□□□ -0.93
USP11-204ENST00000377107 DAZ4Q86SG3 579 aaKnown RBP9.21□□□□□ -0.93
USP11-204ENST00000377107 DAZ3Q9NR90 486 aaKnown RBP9.21□□□□□ -0.93
USP11-204ENST00000377107 TENM4Q6N022 2769 aa9.21□□□□□ -0.93
USP11-204ENST00000377107 TRAV4A0A0B4J268 109 aa9.21□□□□□ -0.94
USP11-204ENST00000377107 H7C423 109 aa9.21□□□□□ -0.94
USP11-204ENST00000377107 KRTAP1-3Q8IUG1 177 aa9.21□□□□□ -0.94
USP11-204ENST00000377107 ANAPC13Q9BS18 74 aa9.21□□□□□ -0.94
USP11-204ENST00000377107 TRBV30A0A0K0K1B3 111 aa9.21□□□□□ -0.94
USP11-204ENST00000377107 XCL1P47992 114 aa9.21□□□□□ -0.94
USP11-204ENST00000377107 NDUFA1O15239 70 aa9.2□□□□□ -0.94
USP11-204ENST00000377107 LRRC75A-AS1Q8N1F1 130 aa9.2□□□□□ -0.94
USP11-204ENST00000377107 SPANXDQ9BXN6 97 aa9.2□□□□□ -0.94
USP11-204ENST00000377107 CDC42SE2Q9NRR3 84 aa9.2□□□□□ -0.94
USP11-204ENST00000377107 SPANXCQ9NY87 97 aa9.2□□□□□ -0.94
USP11-204ENST00000377107 TIRAPP58753 221 aa9.2□□□□□ -0.94
USP11-204ENST00000377107 GAGE2BQ13066 116 aa9.2□□□□□ -0.94
USP11-204ENST00000377107 GAGE2EQ4V326 116 aa9.2□□□□□ -0.94
USP11-204ENST00000377107 GAGE2DQ9UEU5 116 aa9.2□□□□□ -0.94
USP11-204ENST00000377107 IGLV4-60A0A075B6I1 120 aa9.19□□□□□ -0.94
USP11-204ENST00000377107 TRAV25A0A0B4J276 109 aa9.19□□□□□ -0.94
USP11-204ENST00000377107 MIR7-3HGQ8N6C7 128 aa9.19□□□□□ -0.94
USP11-204ENST00000377107 LINC00482Q8N8I6 264 aa9.19□□□□□ -0.94
USP11-204ENST00000377107 C15orf53Q8NAA6 179 aa9.19□□□□□ -0.94
USP11-204ENST00000377107 Q9HAA7 133 aa9.19□□□□□ -0.94
USP11-204ENST00000377107 PAX4O43316 350 aa9.18□□□□□ -0.94
USP11-204ENST00000377107 SOSTDC1Q6X4U4 206 aa9.18□□□□□ -0.94
USP11-204ENST00000377107 IGLV10-54A0A075B6I4 117 aa9.18□□□□□ -0.94
USP11-204ENST00000377107 C16orf74Q96GX8 76 aa9.18□□□□□ -0.94
USP11-204ENST00000377107 TRAV26-1A0A087WT03 109 aa9.18□□□□□ -0.94
USP11-204ENST00000377107 TRBV10-1A0A0K0K1A3 114 aa9.18□□□□□ -0.94
USP11-204ENST00000377107 A8MTW9 85 aa9.18□□□□□ -0.94
USP11-204ENST00000377107 C6orf226Q5I0X4 101 aa9.18□□□□□ -0.94
USP11-204ENST00000377107 FLNBO75369 2602 aaKnown RBP9.18□□□□□ -0.94
USP11-204ENST00000377107 IFITM1P13164 125 aa9.17□□□□□ -0.94
USP11-204ENST00000377107 GYPEP15421 78 aa9.17□□□□□ -0.94
USP11-204ENST00000377107 SCGB1A1P11684 91 aa9.17□□□□□ -0.94
USP11-204ENST00000377107 RNF183Q96D59 192 aa9.17□□□□□ -0.94
USP11-204ENST00000377107 GIG44P09565 113 aaPredicted RBP9.16□□□□□ -0.94
USP11-204ENST00000377107 TMEM86BQ8N661 226 aa9.16□□□□□ -0.94
USP11-204ENST00000377107 EDA2RQ9HAV5 297 aa9.16□□□□□ -0.94
USP11-204ENST00000377107 CRPP02741 224 aa9.16□□□□□ -0.94
USP11-204ENST00000377107 COX7B2Q8TF08 81 aa9.15□□□□□ -0.94
USP11-204ENST00000377107 RNASE1P07998 156 aaKnown RBP9.15□□□□□ -0.94
USP11-204ENST00000377107 VWFP04275 2813 aa9.15□□□□□ -0.94
USP11-204ENST00000377107 SND1-IT1Q9HBX3 110 aa9.15□□□□□ -0.95
USP11-204ENST00000377107 LST1O00453 97 aa9.14□□□□□ -0.95
USP11-204ENST00000377107 ATP5G1P05496 136 aa9.14□□□□□ -0.95
USP11-204ENST00000377107 SBSPONQ8IVN8 264 aa9.14□□□□□ -0.95
USP11-204ENST00000377107 DEFB135Q30KP9 77 aa9.14□□□□□ -0.95
USP11-204ENST00000377107 DNAL4O96015 105 aa9.13□□□□□ -0.95
USP11-204ENST00000377107 IGLV1-51P01701 117 aa9.13□□□□□ -0.95
USP11-204ENST00000377107 BAALC-AS2P0C853 105 aa9.13□□□□□ -0.95
USP11-204ENST00000377107 TRBV6-8A0A0A6YYG3 113 aa9.13□□□□□ -0.95
USP11-204ENST00000377107 IGLV5-39A0A0G2JS06 123 aa9.12□□□□□ -0.95
USP11-204ENST00000377107 COPS9Q8WXC6 57 aa9.11□□□□□ -0.95
USP11-204ENST00000377107 FHL2Q14192 279 aa9.11□□□□□ -0.95
USP11-204ENST00000377107 AKAP9Q99996 3911 aa9.11□□□□□ -0.95
USP11-204ENST00000377107 TEP1Q99973 2627 aaKnown RBP9.11□□□□□ -0.95
USP11-204ENST00000377107 IGLV5-45A0A087WSX0 123 aa9.11□□□□□ -0.95
USP11-204ENST00000377107 GAGE2AQ6NT46 116 aa9.11□□□□□ -0.95
USP11-204ENST00000377107 TIMM17BO60830 172 aa9.1□□□□□ -0.95
USP11-204ENST00000377107 C3orf56Q8N813 242 aa9.1□□□□□ -0.95
USP11-204ENST00000377107 PLAC8L1A1L4L8 177 aa9.1□□□□□ -0.95
USP11-204ENST00000377107 COX7A2LO14548 114 aa9.1□□□□□ -0.95
USP11-204ENST00000377107 CMC4P56277 68 aaPredicted RBP9.1□□□□□ -0.95
USP11-204ENST00000377107 TRBV6-4A0A1B0GX49 114 aa9.1□□□□□ -0.95
USP11-204ENST00000377107 B5MCH6 92 aa9.1□□□□□ -0.95
USP11-204ENST00000377107 F5H768 121 aa9.1□□□□□ -0.95
USP11-204ENST00000377107 H3BT86 120 aa9.1□□□□□ -0.95
USP11-204ENST00000377107 ANGP03950 147 aaKnown RBP9.09□□□□□ -0.95
USP11-204ENST00000377107 SLPIP03973 132 aa9.09□□□□□ -0.95
USP11-204ENST00000377107 HERV-K104P63124 156 aa9.09□□□□□ -0.95
USP11-204ENST00000377107 FAM222AQ5U5X8 452 aa9.09□□□□□ -0.95
USP11-204ENST00000377107 Q8N3U1 123 aa9.09□□□□□ -0.95
USP11-204ENST00000377107 LINC00526Q96FQ7 95 aa9.09□□□□□ -0.95
USP11-204ENST00000377107 PRR3P79522 188 aaKnown RBP9.09□□□□□ -0.95
USP11-204ENST00000377107 SPATA3Q8NHX4 192 aa9.08□□□□□ -0.96
USP11-204ENST00000377107 FAM218AQ96MZ4 157 aa9.08□□□□□ -0.96
USP11-204ENST00000377107 J3QKU1 62 aa9.08□□□□□ -0.96
USP11-204ENST00000377107 LINC00337Q8N6G1 96 aa9.08□□□□□ -0.96
USP11-204ENST00000377107 CLUHP3Q96NS8 147 aa9.08□□□□□ -0.96
USP11-204ENST00000377107 MALP21145 153 aa9.07□□□□□ -0.96
USP11-204ENST00000377107 SS18Q15532 418 aa9.07□□□□□ -0.96
USP11-204ENST00000377107 IL17DQ8TAD2 202 aa9.07□□□□□ -0.96
USP11-204ENST00000377107 C19orf73Q9NVV2 129 aa9.07□□□□□ -0.96
USP11-204ENST00000377107 LINC00269Q8N2A0 174 aa9.07□□□□□ -0.96
USP11-204ENST00000377107 SS18L2Q9UHA2 77 aa9.07□□□□□ -0.96
USP11-204ENST00000377107 CSDC2Q9Y534 153 aaKnown RBP9.07□□□□□ -0.96
USP11-204ENST00000377107 CCL18P55774 89 aa9.06□□□□□ -0.96
USP11-204ENST00000377107 TENM1Q9UKZ4 2725 aa9.06□□□□□ -0.96
USP11-204ENST00000377107 TRAV13-2A0A0B4J235 113 aa9.06□□□□□ -0.96
USP11-204ENST00000377107 LINC00959A0A1B0GUT2 108 aa9.06□□□□□ -0.96
USP11-204ENST00000377107 LECT2O14960 151 aa9.06□□□□□ -0.96
USP11-204ENST00000377107 KRTAP1-1Q07627 177 aa9.06□□□□□ -0.96
USP11-204ENST00000377107 INAFM1C9JVW0 142 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms