RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 DNAL4O96015 105 aa8.43□□□□□ -1.06
DDR1-227ENST00000376570 SPATA25Q9BR10 227 aa8.43□□□□□ -1.06
DDR1-227ENST00000376570 Q9HAA7 133 aa8.43□□□□□ -1.06
DDR1-227ENST00000376570 A0A0J9YXY3 114 aa8.43□□□□□ -1.06
DDR1-227ENST00000376570 COX8CQ7Z4L0 72 aa8.43□□□□□ -1.06
DDR1-227ENST00000376570 RETNQ9HD89 108 aa8.42□□□□□ -1.06
DDR1-227ENST00000376570 PDZD2O15018 2839 aa8.42□□□□□ -1.06
DDR1-227ENST00000376570 VWFP04275 2813 aa8.42□□□□□ -1.06
DDR1-227ENST00000376570 POM121L12Q8N7R1 296 aa8.42□□□□□ -1.06
DDR1-227ENST00000376570 LEPROTO15243 131 aa8.42□□□□□ -1.06
DDR1-227ENST00000376570 TRIAP1O43715 76 aa8.42□□□□□ -1.06
DDR1-227ENST00000376570 SCGB1A1P11684 91 aa8.42□□□□□ -1.06
DDR1-227ENST00000376570 SPATA3Q8NHX4 192 aa8.42□□□□□ -1.06
DDR1-227ENST00000376570 CFAP161Q6P656 301 aa8.41□□□□□ -1.06
DDR1-227ENST00000376570 CDIP1Q9H305 208 aa8.41□□□□□ -1.06
DDR1-227ENST00000376570 FBN1P35555 2871 aaKnown RBP8.41□□□□□ -1.06
DDR1-227ENST00000376570 ADAMTSL4-AS1Q5T5F5 129 aa8.41□□□□□ -1.06
DDR1-227ENST00000376570 Q8N3U1 123 aa8.4□□□□□ -1.06
DDR1-227ENST00000376570 CCDC179H3BU77 68 aa8.4□□□□□ -1.06
DDR1-227ENST00000376570 ATP5G1P05496 136 aa8.4□□□□□ -1.06
DDR1-227ENST00000376570 MED14OSP0DP75 135 aa8.4□□□□□ -1.06
DDR1-227ENST00000376570 ICOSQ9Y6W8 199 aa8.4□□□□□ -1.06
DDR1-227ENST00000376570 A0A096LNT2 108 aa8.4□□□□□ -1.07
DDR1-227ENST00000376570 TMEM263Q8WUH6 116 aaKnown RBP8.4□□□□□ -1.07
DDR1-227ENST00000376570 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.39□□□□□ -1.07
DDR1-227ENST00000376570 ATP6V0E2Q8NHE4 81 aa8.39□□□□□ -1.07
DDR1-227ENST00000376570 PRO0461Q9UI25 63 aa8.39□□□□□ -1.07
DDR1-227ENST00000376570 OTOGQ6ZRI0 2925 aa8.39□□□□□ -1.07
DDR1-227ENST00000376570 TMEM223A0PJW6 202 aa8.39□□□□□ -1.07
DDR1-227ENST00000376570 UBE2D1P51668 147 aa8.39□□□□□ -1.07
DDR1-227ENST00000376570 TENM1Q9UKZ4 2725 aa8.39□□□□□ -1.07
DDR1-227ENST00000376570 FHL3Q13643 280 aa8.39□□□□□ -1.07
DDR1-227ENST00000376570 KLK12Q9UKR0 248 aa8.39□□□□□ -1.07
DDR1-227ENST00000376570 MIR7-3HGQ8N6C7 128 aa8.38□□□□□ -1.07
DDR1-227ENST00000376570 SVIPQ8NHG7 77 aa8.38□□□□□ -1.07
DDR1-227ENST00000376570 EDA2RQ9HAV5 297 aa8.38□□□□□ -1.07
DDR1-227ENST00000376570 IGLV4-60A0A075B6I1 120 aa8.38□□□□□ -1.07
DDR1-227ENST00000376570 LINC00269Q8N2A0 174 aa8.38□□□□□ -1.07
DDR1-227ENST00000376570 IGHV1-58A0A0C4DH39 117 aa8.37□□□□□ -1.07
DDR1-227ENST00000376570 TINCRA0A1B0GVN0 87 aa8.37□□□□□ -1.07
DDR1-227ENST00000376570 CRPP02741 224 aa8.37□□□□□ -1.07
DDR1-227ENST00000376570 UBE2D4Q9Y2X8 147 aa8.37□□□□□ -1.07
DDR1-227ENST00000376570 CR1P17927 2039 aa8.37□□□□□ -1.07
DDR1-227ENST00000376570 FAM236AA0A1B0GUQ0 79 aa8.37□□□□□ -1.07
DDR1-227ENST00000376570 FAM236BA0A1B0GV22 79 aa8.37□□□□□ -1.07
DDR1-227ENST00000376570 NDUFV3P56181 108 aaKnown RBP8.37□□□□□ -1.07
DDR1-227ENST00000376570 MRPL23Q16540 153 aaKnown RBP8.37□□□□□ -1.07
DDR1-227ENST00000376570 PRR3P79522 188 aaKnown RBP8.36□□□□□ -1.07
DDR1-227ENST00000376570 FAM19A4Q96LR4 140 aa8.36□□□□□ -1.07
DDR1-227ENST00000376570 SPANXA1Q9NS26 97 aa8.36□□□□□ -1.07
DDR1-227ENST00000376570 EIF4EBP3O60516 100 aaPredicted RBP8.36□□□□□ -1.07
DDR1-227ENST00000376570 HIST1H4AP62805 103 aaKnown RBP8.36□□□□□ -1.07
DDR1-227ENST00000376570 C16orf74Q96GX8 76 aa8.36□□□□□ -1.07
DDR1-227ENST00000376570 CHCHD7Q9BUK0 85 aa8.36□□□□□ -1.07
DDR1-227ENST00000376570 SLPIP03973 132 aa8.35□□□□□ -1.07
DDR1-227ENST00000376570 HERVK_113P63121 156 aa8.35□□□□□ -1.07
DDR1-227ENST00000376570 LRRC75A-AS1Q8N1F1 130 aa8.35□□□□□ -1.07
DDR1-227ENST00000376570 C9orf116Q5BN46 136 aaPredicted RBP8.35□□□□□ -1.07
DDR1-227ENST00000376570 C9orf153Q5TBE3 101 aa8.35□□□□□ -1.07
DDR1-227ENST00000376570 HERV-K104P63124 156 aa8.34□□□□□ -1.07
DDR1-227ENST00000376570 SS18Q15532 418 aa8.34□□□□□ -1.07
DDR1-227ENST00000376570 BRI3O95415 125 aa8.34□□□□□ -1.07
DDR1-227ENST00000376570 UBE2D3P61077 147 aa8.34□□□□□ -1.07
DDR1-227ENST00000376570 UBE2D2P62837 147 aa8.34□□□□□ -1.07
DDR1-227ENST00000376570 HIGD2BQ4VC39 106 aa8.34□□□□□ -1.07
DDR1-227ENST00000376570 IGKV3D-7A0A0C4DH55 119 aa8.34□□□□□ -1.07
DDR1-227ENST00000376570 TRBV10-2A0A0K0K1G8 114 aa8.34□□□□□ -1.07
DDR1-227ENST00000376570 HILS1P60008 231 aa8.34□□□□□ -1.07
DDR1-227ENST00000376570 TRBV6-5A0A0K0K1A5 114 aa8.33□□□□□ -1.08
DDR1-227ENST00000376570 S100A7L2Q5SY68 101 aa8.33□□□□□ -1.08
DDR1-227ENST00000376570 DNAJC30Q96LL9 226 aa8.33□□□□□ -1.08
DDR1-227ENST00000376570 BAALC-AS2P0C853 105 aa8.33□□□□□ -1.08
DDR1-227ENST00000376570 NTM-AS1Q6ZSK4 140 aa8.33□□□□□ -1.08
DDR1-227ENST00000376570 C11orf72Q8NBR9 251 aa8.33□□□□□ -1.08
DDR1-227ENST00000376570 LINC00242Q5T6M2 205 aa8.33□□□□□ -1.08
DDR1-227ENST00000376570 SND1-IT1Q9HBX3 110 aa8.33□□□□□ -1.08
DDR1-227ENST00000376570 ODF3Q96PU9 254 aa8.32□□□□□ -1.08
DDR1-227ENST00000376570 KRTAP1-3Q8IUG1 177 aa8.32□□□□□ -1.08
DDR1-227ENST00000376570 NCR3O14931 201 aa8.32□□□□□ -1.08
DDR1-227ENST00000376570 DPH3Q96FX2 82 aa8.31□□□□□ -1.08
DDR1-227ENST00000376570 XAGE1AQ9HD64 81 aa8.31□□□□□ -1.08
DDR1-227ENST00000376570 DAZ2Q13117 558 aaKnown RBP8.31□□□□□ -1.08
DDR1-227ENST00000376570 DAZ4Q86SG3 579 aaKnown RBP8.31□□□□□ -1.08
DDR1-227ENST00000376570 DAZ3Q9NR90 486 aaKnown RBP8.31□□□□□ -1.08
DDR1-227ENST00000376570 KMT2BQ9UMN6 2715 aaPredicted RBP8.31□□□□□ -1.08
DDR1-227ENST00000376570 IGHV4-28A0A0C4DH34 117 aa8.31□□□□□ -1.08
DDR1-227ENST00000376570 LECT2O14960 151 aa8.31□□□□□ -1.08
DDR1-227ENST00000376570 COX7B2Q8TF08 81 aa8.31□□□□□ -1.08
DDR1-227ENST00000376570 H7C423 109 aa8.3□□□□□ -1.08
DDR1-227ENST00000376570 IGLV1-51P01701 117 aa8.3□□□□□ -1.08
DDR1-227ENST00000376570 IGKV2D-24A0A075B6R9 120 aa8.29□□□□□ -1.08
DDR1-227ENST00000376570 TRAV25A0A0B4J276 109 aa8.29□□□□□ -1.08
DDR1-227ENST00000376570 TMEM86BQ8N661 226 aa8.29□□□□□ -1.08
DDR1-227ENST00000376570 TRBV6-8A0A0A6YYG3 113 aa8.28□□□□□ -1.08
DDR1-227ENST00000376570 C9orf66Q5T8R8 295 aa8.28□□□□□ -1.08
DDR1-227ENST00000376570 MIAQ16674 131 aa8.28□□□□□ -1.08
DDR1-227ENST00000376570 CMC4P56277 68 aaPredicted RBP8.28□□□□□ -1.08
DDR1-227ENST00000376570 A0A0B4J2C4 111 aa8.27□□□□□ -1.09
DDR1-227ENST00000376570 FSHBP01225 129 aa8.27□□□□□ -1.09
DDR1-227ENST00000376570 LINC00308Q8TCZ7 52 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms