RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 C16orf74Q96GX8 76 aa10.76□□□□□ -0.69
UBQLN1-202ENST00000376395 ZNF702PQ9H963 129 aa10.76□□□□□ -0.69
UBQLN1-202ENST00000376395 CCDC179H3BU77 68 aa10.76□□□□□ -0.69
UBQLN1-202ENST00000376395 TRBV10-1A0A0K0K1A3 114 aa10.75□□□□□ -0.69
UBQLN1-202ENST00000376395 DCHS2Q6V1P9 2916 aa10.75□□□□□ -0.69
UBQLN1-202ENST00000376395 NDUFA1O15239 70 aa10.75□□□□□ -0.69
UBQLN1-202ENST00000376395 SLPIP03973 132 aa10.75□□□□□ -0.69
UBQLN1-202ENST00000376395 PRORYQ9H606 182 aa10.75□□□□□ -0.69
UBQLN1-202ENST00000376395 IGHV4-31P0DP07 118 aa10.74□□□□□ -0.69
UBQLN1-202ENST00000376395 ORMDL1Q9P0S3 153 aa10.74□□□□□ -0.69
UBQLN1-202ENST00000376395 LST1O00453 97 aa10.74□□□□□ -0.69
UBQLN1-202ENST00000376395 UBL5Q9BZL1 73 aa10.74□□□□□ -0.69
UBQLN1-202ENST00000376395 KRTAP10-9P60411 292 aa10.74□□□□□ -0.69
UBQLN1-202ENST00000376395 FAM19A4Q96LR4 140 aa10.73□□□□□ -0.69
UBQLN1-202ENST00000376395 A0A1B0GX51 115 aa10.73□□□□□ -0.69
UBQLN1-202ENST00000376395 PLA2G2AP14555 144 aa10.73□□□□□ -0.69
UBQLN1-202ENST00000376395 CHCHD7Q9BUK0 85 aa10.73□□□□□ -0.69
UBQLN1-202ENST00000376395 H0YGX0 51 aa10.72□□□□□ -0.69
UBQLN1-202ENST00000376395 TIRAPP58753 221 aa10.72□□□□□ -0.69
UBQLN1-202ENST00000376395 FHL3Q13643 280 aa10.72□□□□□ -0.69
UBQLN1-202ENST00000376395 ZANQ9Y493 2812 aa10.72□□□□□ -0.69
UBQLN1-202ENST00000376395 FLNAP21333 2647 aaKnown RBP10.72□□□□□ -0.69
UBQLN1-202ENST00000376395 SPANXDQ9BXN6 97 aa10.72□□□□□ -0.69
UBQLN1-202ENST00000376395 SPANXCQ9NY87 97 aa10.72□□□□□ -0.69
UBQLN1-202ENST00000376395 DNAJC9-AS1A6NH13 148 aa10.72□□□□□ -0.69
UBQLN1-202ENST00000376395 LINC00242Q5T6M2 205 aa10.71□□□□□ -0.69
UBQLN1-202ENST00000376395 SPENQ96T58 3664 aaKnown RBP10.71□□□□□ -0.7
UBQLN1-202ENST00000376395 SDIM1Q6ZPB5 146 aa10.7□□□□□ -0.7
UBQLN1-202ENST00000376395 LINC00643Q86TS7 51 aa10.7□□□□□ -0.7
UBQLN1-202ENST00000376395 WFDC11Q8NEX6 87 aa10.7□□□□□ -0.7
UBQLN1-202ENST00000376395 TMEM126AQ9H061 195 aa10.7□□□□□ -0.7
UBQLN1-202ENST00000376395 MRPL23Q16540 153 aaKnown RBP10.69□□□□□ -0.7
UBQLN1-202ENST00000376395 NCR3O14931 201 aa10.69□□□□□ -0.7
UBQLN1-202ENST00000376395 DEFB135Q30KP9 77 aa10.69□□□□□ -0.7
UBQLN1-202ENST00000376395 AMELXQ99217 191 aa10.69□□□□□ -0.7
UBQLN1-202ENST00000376395 TRAV25A0A0B4J276 109 aa10.69□□□□□ -0.7
UBQLN1-202ENST00000376395 ZNF561-AS1K7EIQ3 104 aa10.69□□□□□ -0.7
UBQLN1-202ENST00000376395 TRACP01848 142 aa10.68□□□□□ -0.7
UBQLN1-202ENST00000376395 ODF3L2Q3SX64 289 aa10.68□□□□□ -0.7
UBQLN1-202ENST00000376395 HRNRQ86YZ3 2850 aaPredicted RBP10.68□□□□□ -0.7
UBQLN1-202ENST00000376395 CFAP46Q8IYW2 2715 aa10.68□□□□□ -0.7
UBQLN1-202ENST00000376395 EIF4EBP3O60516 100 aaPredicted RBP10.67□□□□□ -0.7
UBQLN1-202ENST00000376395 CRYBG3Q68DQ2 2970 aa10.67□□□□□ -0.7
UBQLN1-202ENST00000376395 TEX15Q9BXT5 2789 aa10.66□□□□□ -0.7
UBQLN1-202ENST00000376395 NBEAL2Q6ZNJ1 2754 aa10.66□□□□□ -0.7
UBQLN1-202ENST00000376395 HECTD1Q9ULT8 2610 aa10.66□□□□□ -0.7
UBQLN1-202ENST00000376395 CUBNO60494 3623 aa10.66□□□□□ -0.7
UBQLN1-202ENST00000376395 ITPR3Q14573 2671 aa10.65□□□□□ -0.7
UBQLN1-202ENST00000376395 DSCR8Q96T75 97 aa10.65□□□□□ -0.7
UBQLN1-202ENST00000376395 SMIM1B2RUZ4 78 aa10.65□□□□□ -0.7
UBQLN1-202ENST00000376395 TIMM17BO60830 172 aa10.65□□□□□ -0.7
UBQLN1-202ENST00000376395 GHRHP01286 108 aa10.65□□□□□ -0.71
UBQLN1-202ENST00000376395 LINC00269Q8N2A0 174 aa10.65□□□□□ -0.71
UBQLN1-202ENST00000376395 CELSR1Q9NYQ6 3014 aa10.65□□□□□ -0.71
UBQLN1-202ENST00000376395 Q8N2B8 174 aa10.64□□□□□ -0.71
UBQLN1-202ENST00000376395 CDC42SE2Q9NRR3 84 aa10.64□□□□□ -0.71
UBQLN1-202ENST00000376395 TRBV6-8A0A0A6YYG3 113 aa10.64□□□□□ -0.71
UBQLN1-202ENST00000376395 C1orf158Q8N1D5 194 aa10.64□□□□□ -0.71
UBQLN1-202ENST00000376395 LINC00526Q96FQ7 95 aa10.64□□□□□ -0.71
UBQLN1-202ENST00000376395 ATOX1O00244 68 aa10.63□□□□□ -0.71
UBQLN1-202ENST00000376395 KLK12Q9UKR0 248 aa10.63□□□□□ -0.71
UBQLN1-202ENST00000376395 PRO0255Q9UI72 69 aa10.62□□□□□ -0.71
UBQLN1-202ENST00000376395 SMIM11BQ8TCY0 68 aa10.61□□□□□ -0.71
UBQLN1-202ENST00000376395 DPH3Q96FX2 82 aa10.61□□□□□ -0.71
UBQLN1-202ENST00000376395 GCN1Q92616 2671 aaKnown RBP10.61□□□□□ -0.71
UBQLN1-202ENST00000376395 F8P00451 2351 aa10.61□□□□□ -0.71
UBQLN1-202ENST00000376395 BRI3O95415 125 aa10.6□□□□□ -0.71
UBQLN1-202ENST00000376395 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.6□□□□□ -0.71
UBQLN1-202ENST00000376395 IGLV4-60A0A075B6I1 120 aa10.6□□□□□ -0.71
UBQLN1-202ENST00000376395 TRAV23DV6A0A075B6W5 121 aa10.6□□□□□ -0.71
UBQLN1-202ENST00000376395 SPAG11BQ08648 103 aa10.6□□□□□ -0.71
UBQLN1-202ENST00000376395 FAM222AQ5U5X8 452 aa10.6□□□□□ -0.71
UBQLN1-202ENST00000376395 LINC00482Q8N8I6 264 aa10.6□□□□□ -0.71
UBQLN1-202ENST00000376395 RPL18AQ02543 176 aaKnown RBP10.6□□□□□ -0.71
UBQLN1-202ENST00000376395 PRR3P79522 188 aaKnown RBP10.6□□□□□ -0.71
UBQLN1-202ENST00000376395 APOC4P55056 127 aa10.59□□□□□ -0.71
UBQLN1-202ENST00000376395 CCL18P55774 89 aa10.59□□□□□ -0.71
UBQLN1-202ENST00000376395 IBA57-AS1B1ANH7 110 aa10.58□□□□□ -0.72
UBQLN1-202ENST00000376395 DEFB105AQ8NG35 78 aa10.58□□□□□ -0.72
UBQLN1-202ENST00000376395 USP24Q9UPU5 2620 aa10.58□□□□□ -0.72
UBQLN1-202ENST00000376395 TRBV6-4A0A1B0GX49 114 aa10.58□□□□□ -0.72
UBQLN1-202ENST00000376395 BBC3Q96PG8 261 aaPredicted RBP10.58□□□□□ -0.72
UBQLN1-202ENST00000376395 KLK9Q2XQG4 91 aa10.57□□□□□ -0.72
UBQLN1-202ENST00000376395 hADV29S1A0JD25 119 aa10.57□□□□□ -0.72
UBQLN1-202ENST00000376395 SOSTDC1Q6X4U4 206 aa10.57□□□□□ -0.72
UBQLN1-202ENST00000376395 NTM-AS1Q6ZSK4 140 aa10.57□□□□□ -0.72
UBQLN1-202ENST00000376395 C11orf72Q8NBR9 251 aa10.57□□□□□ -0.72
UBQLN1-202ENST00000376395 FLNBO75369 2602 aaKnown RBP10.56□□□□□ -0.72
UBQLN1-202ENST00000376395 IGSF10Q6WRI0 2623 aa10.56□□□□□ -0.72
UBQLN1-202ENST00000376395 C6orf99Q4VX62 202 aa10.56□□□□□ -0.72
UBQLN1-202ENST00000376395 LINC01006Q8NI28 216 aa10.56□□□□□ -0.72
UBQLN1-202ENST00000376395 CHCHD10Q8WYQ3 142 aaPredicted RBP10.56□□□□□ -0.72
UBQLN1-202ENST00000376395 CAMK2N2Q96S95 79 aa10.56□□□□□ -0.72
UBQLN1-202ENST00000376395 JMJD7-PLA2G4BH0Y9G9 81 aa10.56□□□□□ -0.72
UBQLN1-202ENST00000376395 UTP20O75691 2785 aaKnown RBP10.55□□□□□ -0.72
UBQLN1-202ENST00000376395 XAGE1AQ9HD64 81 aa10.55□□□□□ -0.72
UBQLN1-202ENST00000376395 REG3AQ06141 175 aa10.55□□□□□ -0.72
UBQLN1-202ENST00000376395 LITAFQ99732 161 aa10.55□□□□□ -0.72
UBQLN1-202ENST00000376395 CITED1Q99966 193 aa10.55□□□□□ -0.72
UBQLN1-202ENST00000376395 IGKV2D-24A0A075B6R9 120 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms