RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 CLPSL2Q6UWE3 100 aa7.11□□□□□ -1.27
PDPN-203ENST00000376061 NFE4Q86UQ8 179 aa7.11□□□□□ -1.27
PDPN-203ENST00000376061 MUC7Q8TAX7 377 aa7.11□□□□□ -1.27
PDPN-203ENST00000376061 TENM2Q9NT68 2774 aa7.11□□□□□ -1.27
PDPN-203ENST00000376061 TRAV9-2A0A087WT02 112 aa7.1□□□□□ -1.27
PDPN-203ENST00000376061 TRAV13-1A0A0B4J241 112 aa7.1□□□□□ -1.27
PDPN-203ENST00000376061 hDV102S1A0JD36 115 aa7.1□□□□□ -1.27
PDPN-203ENST00000376061 TCTAP57738 103 aa7.1□□□□□ -1.27
PDPN-203ENST00000376061 LINC01556Q5JQF7 62 aa7.1□□□□□ -1.27
PDPN-203ENST00000376061 WWC2-AS2Q96NR7 200 aa7.1□□□□□ -1.27
PDPN-203ENST00000376061 UPK3BQ9BT76 320 aa7.1□□□□□ -1.27
PDPN-203ENST00000376061 VAMP8Q9BV40 100 aa7.1□□□□□ -1.27
PDPN-203ENST00000376061 STARD9Q9P2P6 4700 aa7.1□□□□□ -1.27
PDPN-203ENST00000376061 IGKV3OR2-268A0A0C4DH90 116 aa7.09□□□□□ -1.27
PDPN-203ENST00000376061 TINCRA0A1B0GVN0 87 aa7.09□□□□□ -1.27
PDPN-203ENST00000376061 DNAH10OSP0CZ25 163 aa7.09□□□□□ -1.27
PDPN-203ENST00000376061 LINC00242Q5T6M2 205 aa7.09□□□□□ -1.27
PDPN-203ENST00000376061 FAM19A3Q7Z5A8 133 aa7.09□□□□□ -1.27
PDPN-203ENST00000376061 LINC00269Q8N2A0 174 aa7.09□□□□□ -1.27
PDPN-203ENST00000376061 PAM16Q9Y3D7 125 aa7.09□□□□□ -1.27
PDPN-203ENST00000376061 LINC00959A0A1B0GUT2 108 aa7.08□□□□□ -1.28
PDPN-203ENST00000376061 ZNF22P17026 224 aaPredicted RBP7.08□□□□□ -1.28
PDPN-203ENST00000376061 PRR34Q9NV39 138 aa7.08□□□□□ -1.28
PDPN-203ENST00000376061 KLK12Q9UKR0 248 aa7.08□□□□□ -1.28
PDPN-203ENST00000376061 IGLV5-45A0A087WSX0 123 aa7.08□□□□□ -1.28
PDPN-203ENST00000376061 SIVA1O15304 175 aa7.08□□□□□ -1.28
PDPN-203ENST00000376061 S100A12P80511 92 aa7.08□□□□□ -1.28
PDPN-203ENST00000376061 REG3AQ06141 175 aa7.08□□□□□ -1.28
PDPN-203ENST00000376061 UBE2DNLQ8IWF7 75 aa7.08□□□□□ -1.28
PDPN-203ENST00000376061 STPG4Q8N801 248 aa7.08□□□□□ -1.28
PDPN-203ENST00000376061 GEMIN7Q9H840 131 aaKnown RBP7.08□□□□□ -1.28
PDPN-203ENST00000376061 HSBP1L1C9JCN9 74 aa7.07□□□□□ -1.28
PDPN-203ENST00000376061 HERVK_113P63121 156 aa7.07□□□□□ -1.28
PDPN-203ENST00000376061 SEC11AP67812 179 aa7.07□□□□□ -1.28
PDPN-203ENST00000376061 COX6A2Q02221 97 aa7.07□□□□□ -1.28
PDPN-203ENST00000376061 PLECQ15149 4684 aaKnown RBP7.07□□□□□ -1.28
PDPN-203ENST00000376061 SPATA45Q537H7 98 aa7.07□□□□□ -1.28
PDPN-203ENST00000376061 TMEM170BQ5T4T1 132 aa7.07□□□□□ -1.28
PDPN-203ENST00000376061 CRPP02741 224 aa7.06□□□□□ -1.28
PDPN-203ENST00000376061 SS18Q15532 418 aa7.06□□□□□ -1.28
PDPN-203ENST00000376061 ENHOQ6UWT2 76 aa7.06□□□□□ -1.28
PDPN-203ENST00000376061 CDKN2A-AS1Q9UH64 79 aa7.06□□□□□ -1.28
PDPN-203ENST00000376061 LYSTQ99698 3801 aa7.05□□□□□ -1.28
PDPN-203ENST00000376061 IGLV10-54A0A075B6I4 117 aa7.05□□□□□ -1.28
PDPN-203ENST00000376061 IGKV2D-26A0A0A0MRZ7 120 aa7.05□□□□□ -1.28
PDPN-203ENST00000376061 TMEM223A0PJW6 202 aa7.05□□□□□ -1.28
PDPN-203ENST00000376061 CCL25O15444 150 aa7.05□□□□□ -1.28
PDPN-203ENST00000376061 XCL1P47992 114 aa7.05□□□□□ -1.28
PDPN-203ENST00000376061 CHCHD10Q8WYQ3 142 aaPredicted RBP7.05□□□□□ -1.28
PDPN-203ENST00000376061 UBE2WQ96B02 151 aa7.05□□□□□ -1.28
PDPN-203ENST00000376061 DNAH1Q9P2D7 4330 aa7.04□□□□□ -1.28
PDPN-203ENST00000376061 IGHV3OR16-9A0A0B4J2B5 98 aa7.04□□□□□ -1.28
PDPN-203ENST00000376061 HERVK_113P61574 105 aa7.04□□□□□ -1.28
PDPN-203ENST00000376061 Q9H8V8 135 aa7.04□□□□□ -1.28
PDPN-203ENST00000376061 E9PLD3 99 aa7.03□□□□□ -1.28
PDPN-203ENST00000376061 H3BRM9 83 aa7.03□□□□□ -1.28
PDPN-203ENST00000376061 SPINK8P0C7L1 97 aa7.03□□□□□ -1.28
PDPN-203ENST00000376061 MIAQ16674 131 aa7.03□□□□□ -1.28
PDPN-203ENST00000376061 PRO1933Q9H354 126 aa7.03□□□□□ -1.28
PDPN-203ENST00000376061 VPS13DQ5THJ4 4388 aa7.02□□□□□ -1.29
PDPN-203ENST00000376061 IGHV3-64A0A075B6Q5 118 aa7.02□□□□□ -1.29
PDPN-203ENST00000376061 TRAV8-3A0A0A6YYJ7 113 aa7.02□□□□□ -1.29
PDPN-203ENST00000376061 TRAV8-4A0A0B4J246 113 aa7.02□□□□□ -1.29
PDPN-203ENST00000376061 IBA57-AS1B1ANH7 110 aa7.02□□□□□ -1.29
PDPN-203ENST00000376061 SMIM1B2RUZ4 78 aa7.02□□□□□ -1.29
PDPN-203ENST00000376061 NMUP48645 174 aa7.02□□□□□ -1.29
PDPN-203ENST00000376061 TSPEAR-AS2P59090 65 aa7.02□□□□□ -1.29
PDPN-203ENST00000376061 FOXI1Q12951 378 aa7.02□□□□□ -1.29
PDPN-203ENST00000376061 CASC10Q5T4H9 136 aa7.02□□□□□ -1.29
PDPN-203ENST00000376061 CD164L2Q6UWJ8 174 aa7.02□□□□□ -1.29
PDPN-203ENST00000376061 C10orf126Q8N4M7 172 aa7.02□□□□□ -1.29
PDPN-203ENST00000376061 KRTAP1-5Q9BYS1 174 aa7.02□□□□□ -1.29
PDPN-203ENST00000376061 TP73-AS1Q9UF72 201 aa7.02□□□□□ -1.29
PDPN-203ENST00000376061 A0A087WZ39 114 aa7.01□□□□□ -1.29
PDPN-203ENST00000376061 IGLV5-39A0A0G2JS06 123 aa7.01□□□□□ -1.29
PDPN-203ENST00000376061 GAGE12HA6NDE8 117 aa7.01□□□□□ -1.29
PDPN-203ENST00000376061 F8WDY8 70 aa7.01□□□□□ -1.29
PDPN-203ENST00000376061 C3orf84H3BNL1 204 aa7.01□□□□□ -1.29
PDPN-203ENST00000376061 KRTAP26-1Q6PEX3 210 aa7.01□□□□□ -1.29
PDPN-203ENST00000376061 C5orf38Q86SI9 138 aa7.01□□□□□ -1.29
PDPN-203ENST00000376061 Q9HAA7 133 aa7.01□□□□□ -1.29
PDPN-203ENST00000376061 IGHV1-58A0A0C4DH39 117 aa7□□□□□ -1.29
PDPN-203ENST00000376061 K7EP13 123 aa7□□□□□ -1.29
PDPN-203ENST00000376061 COX7A2LO14548 114 aa7□□□□□ -1.29
PDPN-203ENST00000376061 LEPROTO15243 131 aa7□□□□□ -1.29
PDPN-203ENST00000376061 COX8AP10176 69 aa7□□□□□ -1.29
PDPN-203ENST00000376061 PCP2Q8IVA1 136 aa7□□□□□ -1.29
PDPN-203ENST00000376061 C14orf144Q96I85 54 aa7□□□□□ -1.29
PDPN-203ENST00000376061 TTTY13Q9BZ97 58 aa7□□□□□ -1.29
PDPN-203ENST00000376061 TSTD3H0UI37 97 aa6.99□□□□□ -1.29
PDPN-203ENST00000376061 LINC01561Q8N1V8 128 aa6.99□□□□□ -1.29
PDPN-203ENST00000376061 PLEKHB2Q96CS7 222 aa6.99□□□□□ -1.29
PDPN-203ENST00000376061 IGKV2D-24A0A075B6R9 120 aa6.98□□□□□ -1.29
PDPN-203ENST00000376061 J3QQQ9 107 aa6.98□□□□□ -1.29
PDPN-203ENST00000376061 TTC32Q5I0X7 151 aa6.98□□□□□ -1.29
PDPN-203ENST00000376061 ALMS1Q8TCU4 4167 aa6.97□□□□□ -1.29
PDPN-203ENST00000376061 NBDYA0A0U1RRE5 68 aa6.97□□□□□ -1.29
PDPN-203ENST00000376061 LGALS3P17931 250 aaKnown RBP6.97□□□□□ -1.29
PDPN-203ENST00000376061 SLC25A34Q6PIV7 304 aa6.97□□□□□ -1.29
PDPN-203ENST00000376061 BOD1L2Q8IYS8 172 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms