RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 LST1O00453 97 aa8.83□□□□□ -1
TNFSF13B-201ENST00000375887 UBE2WQ96B02 151 aa8.83□□□□□ -1
TNFSF13B-201ENST00000375887 FN1P02751 2386 aaKnown RBP8.83□□□□□ -1
TNFSF13B-201ENST00000375887 GIG44P09565 113 aaPredicted RBP8.83□□□□□ -1
TNFSF13B-201ENST00000375887 COX6CP09669 75 aa8.83□□□□□ -1
TNFSF13B-201ENST00000375887 HERVK_113P63121 156 aa8.83□□□□□ -1
TNFSF13B-201ENST00000375887 WFDC11Q8NEX6 87 aa8.83□□□□□ -1
TNFSF13B-201ENST00000375887 IGKV3OR2-268A0A0C4DH90 116 aa8.82□□□□□ -1
TNFSF13B-201ENST00000375887 LOC100131303A0A0U1RQF7 123 aa8.82□□□□□ -1
TNFSF13B-201ENST00000375887 K7EQD1 137 aa8.82□□□□□ -1
TNFSF13B-201ENST00000375887 CCL24O00175 119 aa8.82□□□□□ -1
TNFSF13B-201ENST00000375887 NOP10Q9NPE3 64 aaKnown RBP8.82□□□□□ -1
TNFSF13B-201ENST00000375887 ESM1Q9NQ30 184 aa8.82□□□□□ -1
TNFSF13B-201ENST00000375887 CDC42SE2Q9NRR3 84 aa8.82□□□□□ -1
TNFSF13B-201ENST00000375887 F5H768 121 aa8.81□□□□□ -1
TNFSF13B-201ENST00000375887 RPL36AP83881 106 aaKnown RBP8.81□□□□□ -1
TNFSF13B-201ENST00000375887 MRPL23Q16540 153 aaKnown RBP8.81□□□□□ -1
TNFSF13B-201ENST00000375887 RPL36ALQ969Q0 106 aaKnown RBP8.81□□□□□ -1
TNFSF13B-201ENST00000375887 DNAJC9-AS1A6NH13 148 aa8.81□□□□□ -1
TNFSF13B-201ENST00000375887 RPL35AP18077 110 aaKnown RBP8.81□□□□□ -1
TNFSF13B-201ENST00000375887 CIRBPQ14011 172 aaKnown RBP8.8□□□□□ -1
TNFSF13B-201ENST00000375887 FAM19A3Q7Z5A8 133 aa8.8□□□□□ -1
TNFSF13B-201ENST00000375887 ZNF843Q8N446 348 aa8.8□□□□□ -1
TNFSF13B-201ENST00000375887 CSDC2Q9Y534 153 aaKnown RBP8.8□□□□□ -1
TNFSF13B-201ENST00000375887 ITPR2Q14571 2701 aa8.8□□□□□ -1
TNFSF13B-201ENST00000375887 GCN1Q92616 2671 aaKnown RBP8.8□□□□□ -1
TNFSF13B-201ENST00000375887 TRAV25A0A0B4J276 109 aa8.8□□□□□ -1
TNFSF13B-201ENST00000375887 TMEM126AQ9H061 195 aa8.8□□□□□ -1
TNFSF13B-201ENST00000375887 TRBV10-1A0A0K0K1A3 114 aa8.79□□□□□ -1
TNFSF13B-201ENST00000375887 PLAC8L1A1L4L8 177 aa8.79□□□□□ -1
TNFSF13B-201ENST00000375887 H3BT86 120 aa8.79□□□□□ -1
TNFSF13B-201ENST00000375887 DAZ2Q13117 558 aaKnown RBP8.79□□□□□ -1
TNFSF13B-201ENST00000375887 DAZ4Q86SG3 579 aaKnown RBP8.79□□□□□ -1
TNFSF13B-201ENST00000375887 DAZ3Q9NR90 486 aaKnown RBP8.79□□□□□ -1
TNFSF13B-201ENST00000375887 PRIMA1Q86XR5 153 aa8.79□□□□□ -1
TNFSF13B-201ENST00000375887 LRRC75A-AS1Q8N1F1 130 aa8.78□□□□□ -1
TNFSF13B-201ENST00000375887 CHCHD5Q9BSY4 110 aa8.78□□□□□ -1
TNFSF13B-201ENST00000375887 FAM240AA0A1B0GVK7 77 aa8.77□□□□□ -1
TNFSF13B-201ENST00000375887 TMEM86BQ8N661 226 aa8.76□□□□□ -1.01
TNFSF13B-201ENST00000375887 VWFP04275 2813 aa8.76□□□□□ -1.01
TNFSF13B-201ENST00000375887 DEFB121Q5J5C9 76 aa8.75□□□□□ -1.01
TNFSF13B-201ENST00000375887 COX7A2LO14548 114 aa8.75□□□□□ -1.01
TNFSF13B-201ENST00000375887 TMEM243Q9BU79 118 aa8.75□□□□□ -1.01
TNFSF13B-201ENST00000375887 PDZD2O15018 2839 aa8.75□□□□□ -1.01
TNFSF13B-201ENST00000375887 TRGV2A0A075B6R0 118 aa8.74□□□□□ -1.01
TNFSF13B-201ENST00000375887 TRBV7-7A0A0K0K1E9 115 aa8.74□□□□□ -1.01
TNFSF13B-201ENST00000375887 C19orf73Q9NVV2 129 aa8.74□□□□□ -1.01
TNFSF13B-201ENST00000375887 ANK3Q12955 4377 aaKnown RBP8.74□□□□□ -1.01
TNFSF13B-201ENST00000375887 FAM218AQ96MZ4 157 aa8.74□□□□□ -1.01
TNFSF13B-201ENST00000375887 IGLV4-60A0A075B6I1 120 aa8.73□□□□□ -1.01
TNFSF13B-201ENST00000375887 TOMM7Q9P0U1 55 aa8.73□□□□□ -1.01
TNFSF13B-201ENST00000375887 UBE2L6O14933 153 aa8.73□□□□□ -1.01
TNFSF13B-201ENST00000375887 C3orf56Q8N813 242 aa8.73□□□□□ -1.01
TNFSF13B-201ENST00000375887 CSNK1G2-AS1Q8NCQ2 148 aa8.73□□□□□ -1.01
TNFSF13B-201ENST00000375887 LINC01006Q8NI28 216 aa8.73□□□□□ -1.01
TNFSF13B-201ENST00000375887 PPDPFQ9H3Y8 114 aa8.72□□□□□ -1.01
TNFSF13B-201ENST00000375887 C22orf24Q9Y442 160 aa8.72□□□□□ -1.01
TNFSF13B-201ENST00000375887 IMUPQ9GZP8 106 aa8.71□□□□□ -1.01
TNFSF13B-201ENST00000375887 C16orf74Q96GX8 76 aa8.71□□□□□ -1.02
TNFSF13B-201ENST00000375887 C11orf68Q9H3H3 251 aaKnown RBP8.71□□□□□ -1.02
TNFSF13B-201ENST00000375887 FAM236AA0A1B0GUQ0 79 aa8.7□□□□□ -1.02
TNFSF13B-201ENST00000375887 FAM236BA0A1B0GV22 79 aa8.7□□□□□ -1.02
TNFSF13B-201ENST00000375887 TRBV6-4A0A1B0GX49 114 aa8.7□□□□□ -1.02
TNFSF13B-201ENST00000375887 MIR7-3HGQ8N6C7 128 aa8.7□□□□□ -1.02
TNFSF13B-201ENST00000375887 LINC00337Q8N6G1 96 aa8.7□□□□□ -1.02
TNFSF13B-201ENST00000375887 IGKV2-28A0A075B6P5 120 aa8.7□□□□□ -1.02
TNFSF13B-201ENST00000375887 TRGV4A0A0C4DH28 118 aa8.7□□□□□ -1.02
TNFSF13B-201ENST00000375887 IGKV2D-28P01615 120 aa8.7□□□□□ -1.02
TNFSF13B-201ENST00000375887 IGLV1-51P01701 117 aa8.7□□□□□ -1.02
TNFSF13B-201ENST00000375887 FHL2Q14192 279 aa8.7□□□□□ -1.02
TNFSF13B-201ENST00000375887 HIVEP2P31629 2446 aa8.7□□□□□ -1.02
TNFSF13B-201ENST00000375887 ACYP1P07311 99 aa8.69□□□□□ -1.02
TNFSF13B-201ENST00000375887 COX7B2Q8TF08 81 aa8.69□□□□□ -1.02
TNFSF13B-201ENST00000375887 OVOL2Q9BRP0 275 aa8.69□□□□□ -1.02
TNFSF13B-201ENST00000375887 A0A096LPF7 62 aa8.69□□□□□ -1.02
TNFSF13B-201ENST00000375887 COPS9Q8WXC6 57 aa8.69□□□□□ -1.02
TNFSF13B-201ENST00000375887 TRBV6-8A0A0A6YYG3 113 aa8.68□□□□□ -1.02
TNFSF13B-201ENST00000375887 IGHV3OR16-9A0A0B4J2B5 98 aa8.68□□□□□ -1.02
TNFSF13B-201ENST00000375887 DEFB130BP0DP73 79 aa8.68□□□□□ -1.02
TNFSF13B-201ENST00000375887 DEFB130AP0DP74 79 aa8.68□□□□□ -1.02
TNFSF13B-201ENST00000375887 KRTAP1-1Q07627 177 aa8.68□□□□□ -1.02
TNFSF13B-201ENST00000375887 C9orf153Q5TBE3 101 aa8.68□□□□□ -1.02
TNFSF13B-201ENST00000375887 SMR3AQ99954 134 aa8.68□□□□□ -1.02
TNFSF13B-201ENST00000375887 BAALC-AS2P0C853 105 aa8.68□□□□□ -1.02
TNFSF13B-201ENST00000375887 Q9HAA7 133 aa8.68□□□□□ -1.02
TNFSF13B-201ENST00000375887 TRACP01848 142 aa8.67□□□□□ -1.02
TNFSF13B-201ENST00000375887 CLPSL2Q6UWE3 100 aa8.67□□□□□ -1.02
TNFSF13B-201ENST00000375887 C5orf38Q86SI9 138 aa8.67□□□□□ -1.02
TNFSF13B-201ENST00000375887 C3orf22Q8N5N4 141 aa8.67□□□□□ -1.02
TNFSF13B-201ENST00000375887 SMCR5Q8TEV8 140 aa8.67□□□□□ -1.02
TNFSF13B-201ENST00000375887 SND1-IT1Q9HBX3 110 aa8.67□□□□□ -1.02
TNFSF13B-201ENST00000375887 UQCRQO14949 82 aa8.66□□□□□ -1.02
TNFSF13B-201ENST00000375887 LINC00158P58513 81 aa8.66□□□□□ -1.02
TNFSF13B-201ENST00000375887 CCL18P55774 89 aa8.66□□□□□ -1.02
TNFSF13B-201ENST00000375887 FASNP49327 2511 aaKnown RBP8.65□□□□□ -1.02
TNFSF13B-201ENST00000375887 PFN2P35080 140 aa8.65□□□□□ -1.02
TNFSF13B-201ENST00000375887 RPL28P46779 137 aaKnown RBP8.65□□□□□ -1.02
TNFSF13B-201ENST00000375887 TENM1Q9UKZ4 2725 aa8.65□□□□□ -1.03
TNFSF13B-201ENST00000375887 TRAV13-2A0A0B4J235 113 aa8.65□□□□□ -1.03
TNFSF13B-201ENST00000375887 CMC4P56277 68 aaPredicted RBP8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms