RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 INSL3P51460 131 aa9.95□□□□□ -0.82
HMGCL-203ENST00000374490 LINC00242Q5T6M2 205 aa9.95□□□□□ -0.82
HMGCL-203ENST00000374490 ADAMTSL4-AS1Q5T5F5 129 aa9.94□□□□□ -0.82
HMGCL-203ENST00000374490 OVOL2Q9BRP0 275 aa9.94□□□□□ -0.82
HMGCL-203ENST00000374490 TMEM243Q9BU79 118 aa9.94□□□□□ -0.82
HMGCL-203ENST00000374490 TRBV6-4A0A1B0GX49 114 aa9.93□□□□□ -0.82
HMGCL-203ENST00000374490 C9JAW5 83 aa9.93□□□□□ -0.82
HMGCL-203ENST00000374490 H7C2G1 150 aa9.93□□□□□ -0.82
HMGCL-203ENST00000374490 LINC01620Q4KN68 170 aa9.93□□□□□ -0.82
HMGCL-203ENST00000374490 ANKRD29Q8N6D5 301 aa9.93□□□□□ -0.82
HMGCL-203ENST00000374490 PPDPFQ9H3Y8 114 aa9.93□□□□□ -0.82
HMGCL-203ENST00000374490 NOP10Q9NPE3 64 aaKnown RBP9.93□□□□□ -0.82
HMGCL-203ENST00000374490 ICOSQ9Y6W8 199 aa9.93□□□□□ -0.82
HMGCL-203ENST00000374490 GAGE12JA6NER3 117 aa9.93□□□□□ -0.82
HMGCL-203ENST00000374490 UBE2L6O14933 153 aa9.93□□□□□ -0.82
HMGCL-203ENST00000374490 GIG44P09565 113 aaPredicted RBP9.93□□□□□ -0.82
HMGCL-203ENST00000374490 HERV-K104P63124 156 aa9.93□□□□□ -0.82
HMGCL-203ENST00000374490 GAGE4Q13068 117 aa9.93□□□□□ -0.82
HMGCL-203ENST00000374490 GAGE5Q13069 117 aa9.93□□□□□ -0.82
HMGCL-203ENST00000374490 NTM-AS1Q6ZSK4 140 aa9.93□□□□□ -0.82
HMGCL-203ENST00000374490 TMEM262E9PQX1 116 aa9.92□□□□□ -0.82
HMGCL-203ENST00000374490 TRIAP1O43715 76 aa9.92□□□□□ -0.82
HMGCL-203ENST00000374490 CARD19Q96LW7 228 aa9.92□□□□□ -0.82
HMGCL-203ENST00000374490 CDC42SE2Q9NRR3 84 aa9.92□□□□□ -0.82
HMGCL-203ENST00000374490 C19orf73Q9NVV2 129 aa9.92□□□□□ -0.82
HMGCL-203ENST00000374490 TRGV2A0A075B6R0 118 aa9.91□□□□□ -0.82
HMGCL-203ENST00000374490 TRBV10-2A0A0K0K1G8 114 aa9.91□□□□□ -0.82
HMGCL-203ENST00000374490 A8MZ25 164 aa9.91□□□□□ -0.82
HMGCL-203ENST00000374490 PF4P02776 101 aa9.91□□□□□ -0.82
HMGCL-203ENST00000374490 LINC00694P0DN24 101 aa9.91□□□□□ -0.82
HMGCL-203ENST00000374490 COX6A2Q02221 97 aa9.91□□□□□ -0.82
HMGCL-203ENST00000374490 PLAC8L1A1L4L8 177 aa9.9□□□□□ -0.82
HMGCL-203ENST00000374490 SMIM1B2RUZ4 78 aa9.9□□□□□ -0.82
HMGCL-203ENST00000374490 MGAM2Q2M2H8 2515 aa9.9□□□□□ -0.82
HMGCL-203ENST00000374490 WNK1Q9H4A3 2382 aa9.89□□□□□ -0.83
HMGCL-203ENST00000374490 GAGE7O76087 117 aa9.89□□□□□ -0.83
HMGCL-203ENST00000374490 GAGE12FP0CL80 117 aa9.89□□□□□ -0.83
HMGCL-203ENST00000374490 GAGE12GP0CL81 117 aa9.89□□□□□ -0.83
HMGCL-203ENST00000374490 GAGE12IP0CL82 117 aa9.89□□□□□ -0.83
HMGCL-203ENST00000374490 KRTAP10-3P60369 221 aa9.89□□□□□ -0.83
HMGCL-203ENST00000374490 Q9H8V8 135 aa9.89□□□□□ -0.83
HMGCL-203ENST00000374490 SORL1Q92673 2214 aa9.89□□□□□ -0.83
HMGCL-203ENST00000374490 TRAV13-1A0A0B4J241 112 aa9.89□□□□□ -0.83
HMGCL-203ENST00000374490 TRGV4A0A0C4DH28 118 aa9.89□□□□□ -0.83
HMGCL-203ENST00000374490 RPL35AP18077 110 aaKnown RBP9.89□□□□□ -0.83
HMGCL-203ENST00000374490 RPL13AP40429 203 aaKnown RBP9.89□□□□□ -0.83
HMGCL-203ENST00000374490 CSNK1G2-AS1Q8NCQ2 148 aa9.89□□□□□ -0.83
HMGCL-203ENST00000374490 LINC00308Q8TCZ7 52 aa9.89□□□□□ -0.83
HMGCL-203ENST00000374490 CDIP1Q9H305 208 aa9.89□□□□□ -0.83
HMGCL-203ENST00000374490 TENM1Q9UKZ4 2725 aa9.88□□□□□ -0.83
HMGCL-203ENST00000374490 H3BT86 120 aa9.88□□□□□ -0.83
HMGCL-203ENST00000374490 F5H768 121 aa9.87□□□□□ -0.83
HMGCL-203ENST00000374490 ZNF625Q96I27 306 aaPredicted RBP9.87□□□□□ -0.83
HMGCL-203ENST00000374490 NPC2P61916 151 aa9.85□□□□□ -0.83
HMGCL-203ENST00000374490 MEIG1Q5JSS6 88 aa9.85□□□□□ -0.83
HMGCL-203ENST00000374490 MEGF8Q7Z7M0 2845 aa9.85□□□□□ -0.83
HMGCL-203ENST00000374490 LST1O00453 97 aa9.85□□□□□ -0.83
HMGCL-203ENST00000374490 KIR2DL5BQ8NHK3 375 aa9.85□□□□□ -0.83
HMGCL-203ENST00000374490 WFDC10AQ9H1F0 79 aa9.85□□□□□ -0.83
HMGCL-203ENST00000374490 C2orf82Q6UX34 121 aa9.84□□□□□ -0.83
HMGCL-203ENST00000374490 FHL2Q14192 279 aa9.83□□□□□ -0.84
HMGCL-203ENST00000374490 LINC00482Q8N8I6 264 aa9.83□□□□□ -0.84
HMGCL-203ENST00000374490 NTN5Q8WTR8 489 aaPredicted RBP9.83□□□□□ -0.84
HMGCL-203ENST00000374490 UBE2WQ96B02 151 aa9.83□□□□□ -0.84
HMGCL-203ENST00000374490 TRBV6-8A0A0A6YYG3 113 aa9.82□□□□□ -0.84
HMGCL-203ENST00000374490 A0A1B0GV72 72 aa9.82□□□□□ -0.84
HMGCL-203ENST00000374490 DAND5Q8N907 189 aa9.82□□□□□ -0.84
HMGCL-203ENST00000374490 LINC00612Q8N6U2 182 aa9.82□□□□□ -0.84
HMGCL-203ENST00000374490 COX7B2Q8TF08 81 aa9.82□□□□□ -0.84
HMGCL-203ENST00000374490 LOC100131303A0A0U1RQF7 123 aa9.81□□□□□ -0.84
HMGCL-203ENST00000374490 SMIM9A6NGZ8 99 aa9.81□□□□□ -0.84
HMGCL-203ENST00000374490 FAM222AQ5U5X8 452 aa9.81□□□□□ -0.84
HMGCL-203ENST00000374490 CITED1Q99966 193 aa9.81□□□□□ -0.84
HMGCL-203ENST00000374490 COX7A2LO14548 114 aa9.8□□□□□ -0.84
HMGCL-203ENST00000374490 XGP55808 180 aa9.8□□□□□ -0.84
HMGCL-203ENST00000374490 GAGE6Q13070 117 aa9.8□□□□□ -0.84
HMGCL-203ENST00000374490 TRAV8-4A0A0B4J246 113 aa9.79□□□□□ -0.84
HMGCL-203ENST00000374490 CHCHD5Q9BSY4 110 aa9.79□□□□□ -0.84
HMGCL-203ENST00000374490 TRAV13-2A0A0B4J235 113 aa9.78□□□□□ -0.84
HMGCL-203ENST00000374490 MT-ATP8P03928 68 aa9.78□□□□□ -0.84
HMGCL-203ENST00000374490 C9orf66Q5T8R8 295 aa9.78□□□□□ -0.84
HMGCL-203ENST00000374490 SOSTDC1Q6X4U4 206 aa9.78□□□□□ -0.84
HMGCL-203ENST00000374490 CLEC2BQ92478 149 aa9.78□□□□□ -0.84
HMGCL-203ENST00000374490 DEFB121Q5J5C9 76 aa9.78□□□□□ -0.84
HMGCL-203ENST00000374490 TRRAPQ9Y4A5 3859 aa9.77□□□□□ -0.85
HMGCL-203ENST00000374490 A0A087WZ39 114 aa9.76□□□□□ -0.85
HMGCL-203ENST00000374490 A0A0U1RRA0 63 aa9.76□□□□□ -0.85
HMGCL-203ENST00000374490 TRACP01848 142 aa9.76□□□□□ -0.85
HMGCL-203ENST00000374490 MRPL23Q16540 153 aaKnown RBP9.76□□□□□ -0.85
HMGCL-203ENST00000374490 IGLV4-60A0A075B6I1 120 aa9.75□□□□□ -0.85
HMGCL-203ENST00000374490 IGHV3OR16-9A0A0B4J2B5 98 aa9.75□□□□□ -0.85
HMGCL-203ENST00000374490 FAM240AA0A1B0GVK7 77 aa9.75□□□□□ -0.85
HMGCL-203ENST00000374490 LINC01561Q8N1V8 128 aa9.75□□□□□ -0.85
HMGCL-203ENST00000374490 TEX49A0A1B0GTD5 131 aa9.74□□□□□ -0.85
HMGCL-203ENST00000374490 IBA57-AS1B1ANH7 110 aa9.74□□□□□ -0.85
HMGCL-203ENST00000374490 CRPP02741 224 aa9.74□□□□□ -0.85
HMGCL-203ENST00000374490 CKS1BP61024 79 aa9.74□□□□□ -0.85
HMGCL-203ENST00000374490 A0A1B0GUV1 79 aa9.74□□□□□ -0.85
HMGCL-203ENST00000374490 LYRM9A8MSI8 78 aa9.74□□□□□ -0.85
HMGCL-203ENST00000374490 DEFB130BP0DP73 79 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms