RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 IGLL5B9A064 214 aa10.66□□□□□ -0.7
NIPAL3-204ENST00000374399 LEPROTO15243 131 aa10.66□□□□□ -0.7
NIPAL3-204ENST00000374399 SEC11AP67812 179 aa10.66□□□□□ -0.7
NIPAL3-204ENST00000374399 IGHV1-58A0A0C4DH39 117 aa10.65□□□□□ -0.7
NIPAL3-204ENST00000374399 J3QQQ9 107 aa10.65□□□□□ -0.7
NIPAL3-204ENST00000374399 ANGP03950 147 aaKnown RBP10.65□□□□□ -0.7
NIPAL3-204ENST00000374399 IGHV3-30-3P0DP02 117 aa10.65□□□□□ -0.7
NIPAL3-204ENST00000374399 PRR34Q9NV39 138 aa10.65□□□□□ -0.7
NIPAL3-204ENST00000374399 LYSTQ99698 3801 aa10.65□□□□□ -0.7
NIPAL3-204ENST00000374399 IGLV5-39A0A0G2JS06 123 aa10.64□□□□□ -0.71
NIPAL3-204ENST00000374399 MYMXA0A1B0GTQ4 84 aa10.64□□□□□ -0.71
NIPAL3-204ENST00000374399 REG3AQ06141 175 aa10.64□□□□□ -0.71
NIPAL3-204ENST00000374399 LINC00588Q9Y4M8 146 aa10.64□□□□□ -0.71
NIPAL3-204ENST00000374399 SMIM1B2RUZ4 78 aa10.64□□□□□ -0.71
NIPAL3-204ENST00000374399 SIVA1O15304 175 aa10.64□□□□□ -0.71
NIPAL3-204ENST00000374399 IGHV3-30P01768 117 aa10.64□□□□□ -0.71
NIPAL3-204ENST00000374399 IGHV3-33P01772 117 aa10.64□□□□□ -0.71
NIPAL3-204ENST00000374399 IGHV3-30-5P0DP03 117 aa10.64□□□□□ -0.71
NIPAL3-204ENST00000374399 EREGO14944 169 aa10.63□□□□□ -0.71
NIPAL3-204ENST00000374399 ENHOQ6UWT2 76 aa10.63□□□□□ -0.71
NIPAL3-204ENST00000374399 PLEKHB2Q96CS7 222 aa10.63□□□□□ -0.71
NIPAL3-204ENST00000374399 SNHG12Q9BXW3 62 aa10.63□□□□□ -0.71
NIPAL3-204ENST00000374399 H3BRM9 83 aa10.62□□□□□ -0.71
NIPAL3-204ENST00000374399 CCL25O15444 150 aa10.62□□□□□ -0.71
NIPAL3-204ENST00000374399 KLK12Q9UKR0 248 aa10.62□□□□□ -0.71
NIPAL3-204ENST00000374399 ZNF815PA8K554 130 aa10.61□□□□□ -0.71
NIPAL3-204ENST00000374399 HIGD1BQ9P298 99 aa10.61□□□□□ -0.71
NIPAL3-204ENST00000374399 XCL1P47992 114 aa10.61□□□□□ -0.71
NIPAL3-204ENST00000374399 APLNQ9ULZ1 77 aa10.61□□□□□ -0.71
NIPAL3-204ENST00000374399 A0A087WZ39 114 aa10.6□□□□□ -0.71
NIPAL3-204ENST00000374399 SS18Q15532 418 aa10.6□□□□□ -0.71
NIPAL3-204ENST00000374399 LINC01556Q5JQF7 62 aa10.6□□□□□ -0.71
NIPAL3-204ENST00000374399 IGLV10-54A0A075B6I4 117 aa10.59□□□□□ -0.71
NIPAL3-204ENST00000374399 DNAH10OSP0CZ25 163 aa10.59□□□□□ -0.71
NIPAL3-204ENST00000374399 LGALS3P17931 250 aaKnown RBP10.59□□□□□ -0.71
NIPAL3-204ENST00000374399 C5orf38Q86SI9 138 aa10.59□□□□□ -0.71
NIPAL3-204ENST00000374399 C10orf126Q8N4M7 172 aa10.59□□□□□ -0.71
NIPAL3-204ENST00000374399 CHCHD10Q8WYQ3 142 aaPredicted RBP10.59□□□□□ -0.71
NIPAL3-204ENST00000374399 VPS13DQ5THJ4 4388 aa10.59□□□□□ -0.71
NIPAL3-204ENST00000374399 ZFAND6Q6FIF0 208 aa10.58□□□□□ -0.72
NIPAL3-204ENST00000374399 TENM2Q9NT68 2774 aa10.58□□□□□ -0.72
NIPAL3-204ENST00000374399 CD164L2Q6UWJ8 174 aa10.58□□□□□ -0.72
NIPAL3-204ENST00000374399 M0R143 59 aa10.57□□□□□ -0.72
NIPAL3-204ENST00000374399 HINT1P49773 126 aaPredicted RBP10.57□□□□□ -0.72
NIPAL3-204ENST00000374399 FOXI1Q12951 378 aa10.57□□□□□ -0.72
NIPAL3-204ENST00000374399 CCL18P55774 89 aa10.56□□□□□ -0.72
NIPAL3-204ENST00000374399 KRTAP26-1Q6PEX3 210 aa10.56□□□□□ -0.72
NIPAL3-204ENST00000374399 UPK3BQ9BT76 320 aa10.56□□□□□ -0.72
NIPAL3-204ENST00000374399 BVES-AS1Q5T3Y7 98 aa10.55□□□□□ -0.72
NIPAL3-204ENST00000374399 UBE2WQ96B02 151 aa10.55□□□□□ -0.72
NIPAL3-204ENST00000374399 NDUFA12Q9UI09 145 aa10.55□□□□□ -0.72
NIPAL3-204ENST00000374399 A0A0J9YXY3 114 aa10.54□□□□□ -0.72
NIPAL3-204ENST00000374399 HSD52Q0P140 79 aa10.54□□□□□ -0.72
NIPAL3-204ENST00000374399 LINC01561Q8N1V8 128 aa10.54□□□□□ -0.72
NIPAL3-204ENST00000374399 ZNF625Q96I27 306 aaPredicted RBP10.54□□□□□ -0.72
NIPAL3-204ENST00000374399 NDUFA1O15239 70 aa10.53□□□□□ -0.72
NIPAL3-204ENST00000374399 LITAFQ99732 161 aa10.53□□□□□ -0.72
NIPAL3-204ENST00000374399 TGP01266 2768 aa10.53□□□□□ -0.72
NIPAL3-204ENST00000374399 GAGE12HA6NDE8 117 aa10.53□□□□□ -0.72
NIPAL3-204ENST00000374399 NUPR2A6NF83 97 aa10.53□□□□□ -0.72
NIPAL3-204ENST00000374399 BATFQ16520 125 aa10.53□□□□□ -0.72
NIPAL3-204ENST00000374399 SCGB1D4Q6XE38 83 aa10.53□□□□□ -0.72
NIPAL3-204ENST00000374399 TRAV8-4A0A0B4J246 113 aa10.52□□□□□ -0.73
NIPAL3-204ENST00000374399 MIAQ16674 131 aa10.52□□□□□ -0.73
NIPAL3-204ENST00000374399 COX7B2Q8TF08 81 aa10.52□□□□□ -0.73
NIPAL3-204ENST00000374399 K7EP13 123 aa10.51□□□□□ -0.73
NIPAL3-204ENST00000374399 COX7A2LO14548 114 aa10.51□□□□□ -0.73
NIPAL3-204ENST00000374399 CRPP02741 224 aa10.51□□□□□ -0.73
NIPAL3-204ENST00000374399 Q9H8V8 135 aa10.51□□□□□ -0.73
NIPAL3-204ENST00000374399 KIAA0087Q14695 138 aa10.5□□□□□ -0.73
NIPAL3-204ENST00000374399 SPANXB1Q9NS25 103 aaPredicted RBP10.5□□□□□ -0.73
NIPAL3-204ENST00000374399 DNAH10Q8IVF4 4471 aa10.5□□□□□ -0.73
NIPAL3-204ENST00000374399 FXYD2P54710 66 aa10.5□□□□□ -0.73
NIPAL3-204ENST00000374399 TAL2Q16559 108 aa10.5□□□□□ -0.73
NIPAL3-204ENST00000374399 ADAMTSL4-AS1Q5T5F5 129 aa10.5□□□□□ -0.73
NIPAL3-204ENST00000374399 TM2D2Q9BX73 214 aa10.5□□□□□ -0.73
NIPAL3-204ENST00000374399 IBA57-AS1B1ANH7 110 aa10.49□□□□□ -0.73
NIPAL3-204ENST00000374399 CEND1Q8N111 149 aa10.49□□□□□ -0.73
NIPAL3-204ENST00000374399 TOMM7Q9P0U1 55 aa10.49□□□□□ -0.73
NIPAL3-204ENST00000374399 KLK5Q9Y337 293 aaPredicted RBP10.49□□□□□ -0.73
NIPAL3-204ENST00000374399 ORAOV1Q8WV07 137 aa10.48□□□□□ -0.73
NIPAL3-204ENST00000374399 GCSHP23434 173 aa10.47□□□□□ -0.73
NIPAL3-204ENST00000374399 Q8IZM0 81 aa10.47□□□□□ -0.73
NIPAL3-204ENST00000374399 HIST1H4GQ99525 98 aa10.47□□□□□ -0.73
NIPAL3-204ENST00000374399 KRTAP1-5Q9BYS1 174 aa10.47□□□□□ -0.73
NIPAL3-204ENST00000374399 TIMM17BO60830 172 aa10.45□□□□□ -0.74
NIPAL3-204ENST00000374399 LBHQ53QV2 105 aaPredicted RBP10.45□□□□□ -0.74
NIPAL3-204ENST00000374399 MALP21145 153 aa10.44□□□□□ -0.74
NIPAL3-204ENST00000374399 SRSF9Q13242 221 aaKnown RBP eCLIP10.44□□□□□ -0.74
NIPAL3-204ENST00000374399 C2orf82Q6UX34 121 aa10.44□□□□□ -0.74
NIPAL3-204ENST00000374399 TMEM238C9JI98 176 aa10.44□□□□□ -0.74
NIPAL3-204ENST00000374399 EIF4EBP3O60516 100 aaPredicted RBP10.44□□□□□ -0.74
NIPAL3-204ENST00000374399 HERV-K104P63124 156 aa10.44□□□□□ -0.74
NIPAL3-204ENST00000374399 SPANXDQ9BXN6 97 aa10.44□□□□□ -0.74
NIPAL3-204ENST00000374399 Q9HAA7 133 aa10.44□□□□□ -0.74
NIPAL3-204ENST00000374399 SPANXCQ9NY87 97 aa10.44□□□□□ -0.74
NIPAL3-204ENST00000374399 IGKV2D-24A0A075B6R9 120 aa10.43□□□□□ -0.74
NIPAL3-204ENST00000374399 C6orf226Q5I0X4 101 aa10.43□□□□□ -0.74
NIPAL3-204ENST00000374399 COL5A1-AS1Q5SY13 56 aa10.43□□□□□ -0.74
NIPAL3-204ENST00000374399 C1orf43Q9BWL3 253 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms