RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 ZNF625Q96I27 306 aaPredicted RBP13.19□□□□□ -0.3
USP49-202ENST00000373010 Q9H8V8 135 aa13.19□□□□□ -0.3
USP49-202ENST00000373010 NBEAL2Q6ZNJ1 2754 aa13.19□□□□□ -0.3
USP49-202ENST00000373010 Q1RN00 199 aa13.18□□□□□ -0.3
USP49-202ENST00000373010 X6R8D5 127 aa13.18□□□□□ -0.3
USP49-202ENST00000373010 F5H768 121 aa13.18□□□□□ -0.3
USP49-202ENST00000373010 TRBV20-1A0A075B6N2 111 aa13.17□□□□□ -0.3
USP49-202ENST00000373010 TIMM17BO60830 172 aa13.17□□□□□ -0.3
USP49-202ENST00000373010 INSL3P51460 131 aa13.17□□□□□ -0.3
USP49-202ENST00000373010 KIR2DL5BQ8NHK3 375 aa13.17□□□□□ -0.3
USP49-202ENST00000373010 TRBV6-8A0A0A6YYG3 113 aa13.16□□□□□ -0.3
USP49-202ENST00000373010 C9orf66Q5T8R8 295 aa13.16□□□□□ -0.3
USP49-202ENST00000373010 IGKV3OR2-268A0A0C4DH90 116 aa13.15□□□□□ -0.3
USP49-202ENST00000373010 A0A0U1RRA0 63 aa13.15□□□□□ -0.3
USP49-202ENST00000373010 HIVEP1P15822 2718 aa13.15□□□□□ -0.3
USP49-202ENST00000373010 IGLV4-60A0A075B6I1 120 aa13.15□□□□□ -0.3
USP49-202ENST00000373010 LINC00612Q8N6U2 182 aa13.15□□□□□ -0.3
USP49-202ENST00000373010 CHCHD5Q9BSY4 110 aa13.15□□□□□ -0.3
USP49-202ENST00000373010 H7C423 109 aa13.14□□□□□ -0.31
USP49-202ENST00000373010 CIRBPQ14011 172 aaKnown RBP13.12□□□□□ -0.31
USP49-202ENST00000373010 TRIAP1O43715 76 aa13.12□□□□□ -0.31
USP49-202ENST00000373010 IFITM1P13164 125 aa13.12□□□□□ -0.31
USP49-202ENST00000373010 GYPEP15421 78 aa13.12□□□□□ -0.31
USP49-202ENST00000373010 PRIMA1Q86XR5 153 aa13.11□□□□□ -0.31
USP49-202ENST00000373010 J3QR89 54 aa13.11□□□□□ -0.31
USP49-202ENST00000373010 DEFB4AO15263 64 aa13.11□□□□□ -0.31
USP49-202ENST00000373010 DEFB135Q30KP9 77 aa13.11□□□□□ -0.31
USP49-202ENST00000373010 FAM222AQ5U5X8 452 aa13.1□□□□□ -0.31
USP49-202ENST00000373010 LINC00308Q8TCZ7 52 aa13.1□□□□□ -0.31
USP49-202ENST00000373010 ATRQ13535 2644 aa13.1□□□□□ -0.31
USP49-202ENST00000373010 SMIM9A6NGZ8 99 aa13.1□□□□□ -0.31
USP49-202ENST00000373010 TRBV30A0A0K0K1B3 111 aa13.09□□□□□ -0.31
USP49-202ENST00000373010 ATP6V0E2Q8NHE4 81 aa13.09□□□□□ -0.31
USP49-202ENST00000373010 FOXI1Q12951 378 aa13.09□□□□□ -0.31
USP49-202ENST00000373010 MEIG1Q5JSS6 88 aa13.09□□□□□ -0.31
USP49-202ENST00000373010 RNF183Q96D59 192 aa13.09□□□□□ -0.31
USP49-202ENST00000373010 ICOSQ9Y6W8 199 aa13.09□□□□□ -0.31
USP49-202ENST00000373010 C9JAW5 83 aa13.08□□□□□ -0.32
USP49-202ENST00000373010 CITED1Q99966 193 aa13.08□□□□□ -0.32
USP49-202ENST00000373010 A0A096LPF7 62 aa13.08□□□□□ -0.32
USP49-202ENST00000373010 SOSTDC1Q6X4U4 206 aa13.08□□□□□ -0.32
USP49-202ENST00000373010 RPL13AP40429 203 aaKnown RBP13.07□□□□□ -0.32
USP49-202ENST00000373010 TEP1Q99973 2627 aaKnown RBP13.07□□□□□ -0.32
USP49-202ENST00000373010 CARD19Q96LW7 228 aa13.06□□□□□ -0.32
USP49-202ENST00000373010 SLC25A20O43772 301 aa13.05□□□□□ -0.32
USP49-202ENST00000373010 ATXN8Q156A1 80 aa13.05□□□□□ -0.32
USP49-202ENST00000373010 TEN1Q86WV5 123 aa13.05□□□□□ -0.32
USP49-202ENST00000373010 TOMM7Q9P0U1 55 aa13.05□□□□□ -0.32
USP49-202ENST00000373010 PRO0255Q9UI72 69 aa13.05□□□□□ -0.32
USP49-202ENST00000373010 ANKRD29Q8N6D5 301 aa13.05□□□□□ -0.32
USP49-202ENST00000373010 COX7B2Q8TF08 81 aa13.05□□□□□ -0.32
USP49-202ENST00000373010 GAGE12HA6NDE8 117 aa13.04□□□□□ -0.32
USP49-202ENST00000373010 HERV-K104P63124 156 aa13.04□□□□□ -0.32
USP49-202ENST00000373010 IGHV3OR16-9A0A0B4J2B5 98 aa13.03□□□□□ -0.32
USP49-202ENST00000373010 TMEM262E9PQX1 116 aa13.03□□□□□ -0.32
USP49-202ENST00000373010 LINC01620Q4KN68 170 aa13.03□□□□□ -0.32
USP49-202ENST00000373010 IGHV4-28A0A0C4DH34 117 aa13.03□□□□□ -0.32
USP49-202ENST00000373010 LYRM9A8MSI8 78 aa13.03□□□□□ -0.32
USP49-202ENST00000373010 APOC4P55056 127 aa13.03□□□□□ -0.32
USP49-202ENST00000373010 PAX4O43316 350 aa13.02□□□□□ -0.32
USP49-202ENST00000373010 C5orf38Q86SI9 138 aa13.02□□□□□ -0.32
USP49-202ENST00000373010 PPDPFLQ8WWR9 84 aa13.02□□□□□ -0.32
USP49-202ENST00000373010 LINC00959A0A1B0GUT2 108 aa13.02□□□□□ -0.33
USP49-202ENST00000373010 CLEC2BQ92478 149 aa13.02□□□□□ -0.33
USP49-202ENST00000373010 SPATA25Q9BR10 227 aa13□□□□□ -0.33
USP49-202ENST00000373010 COX6CP09669 75 aa13□□□□□ -0.33
USP49-202ENST00000373010 CLPSL2Q6UWE3 100 aa13□□□□□ -0.33
USP49-202ENST00000373010 CELA1Q9UNI1 258 aa13□□□□□ -0.33
USP49-202ENST00000373010 TRRAPQ9Y4A5 3859 aa12.99□□□□□ -0.33
USP49-202ENST00000373010 A0A087WZ39 114 aa12.99□□□□□ -0.33
USP49-202ENST00000373010 DAD1P61803 113 aa12.98□□□□□ -0.33
USP49-202ENST00000373010 COPS9Q8WXC6 57 aa12.98□□□□□ -0.33
USP49-202ENST00000373010 XCL1P47992 114 aa12.97□□□□□ -0.33
USP49-202ENST00000373010 Q8NAQ8 132 aa12.97□□□□□ -0.33
USP49-202ENST00000373010 SIGMAR1Q99720 223 aa12.97□□□□□ -0.33
USP49-202ENST00000373010 A0A1B0GUV1 79 aa12.97□□□□□ -0.33
USP49-202ENST00000373010 M0QXV9 152 aa12.96□□□□□ -0.33
USP49-202ENST00000373010 MIR7-3HGQ8N6C7 128 aa12.96□□□□□ -0.33
USP49-202ENST00000373010 WFDC9Q8NEX5 89 aa12.96□□□□□ -0.33
USP49-202ENST00000373010 TRBV10-2A0A0K0K1G8 114 aa12.96□□□□□ -0.34
USP49-202ENST00000373010 IGHV4-30-4P0DP06 118 aa12.95□□□□□ -0.34
USP49-202ENST00000373010 Q8N3U1 123 aa12.94□□□□□ -0.34
USP49-202ENST00000373010 NTN5Q8WTR8 489 aaPredicted RBP12.94□□□□□ -0.34
USP49-202ENST00000373010 C11orf68Q9H3H3 251 aaKnown RBP12.94□□□□□ -0.34
USP49-202ENST00000373010 TRAV26-1A0A087WT03 109 aa12.94□□□□□ -0.34
USP49-202ENST00000373010 LST1O00453 97 aa12.94□□□□□ -0.34
USP49-202ENST00000373010 LINC00158P58513 81 aa12.94□□□□□ -0.34
USP49-202ENST00000373010 SS18Q15532 418 aa12.94□□□□□ -0.34
USP49-202ENST00000373010 CDIP1Q9H305 208 aa12.93□□□□□ -0.34
USP49-202ENST00000373010 MIFP14174 115 aa12.93□□□□□ -0.34
USP49-202ENST00000373010 HTN3P15516 51 aa12.92□□□□□ -0.34
USP49-202ENST00000373010 ATP5G1P05496 136 aa12.92□□□□□ -0.34
USP49-202ENST00000373010 SHISA2Q6UWI4 295 aa12.91□□□□□ -0.34
USP49-202ENST00000373010 C2orf82Q6UX34 121 aa12.91□□□□□ -0.34
USP49-202ENST00000373010 LINC00269Q8N2A0 174 aa12.91□□□□□ -0.34
USP49-202ENST00000373010 PFN2P35080 140 aa12.91□□□□□ -0.34
USP49-202ENST00000373010 LINC01600Q96MT4 127 aa12.9□□□□□ -0.34
USP49-202ENST00000373010 WIPF1O43516 503 aa12.9□□□□□ -0.34
USP49-202ENST00000373010 C6orf226Q5I0X4 101 aa12.9□□□□□ -0.34
USP49-202ENST00000373010 PPDPFQ9H3Y8 114 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms