RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 COX7CP15954 63 aa17.4■□□□□ 0.38
RAPGEF1-203ENST00000372195 IL17DQ8TAD2 202 aa17.4■□□□□ 0.38
RAPGEF1-203ENST00000372195 TRAV10A0A0B4J240 114 aa17.39■□□□□ 0.38
RAPGEF1-203ENST00000372195 CDC42SE2Q9NRR3 84 aa17.39■□□□□ 0.37
RAPGEF1-203ENST00000372195 PTPRQQ9UMZ3 2332 aa17.39■□□□□ 0.37
RAPGEF1-203ENST00000372195 LELP1Q5T871 98 aa17.38■□□□□ 0.37
RAPGEF1-203ENST00000372195 IGIPA6NJ69 53 aa17.38■□□□□ 0.37
RAPGEF1-203ENST00000372195 FAM19A3Q7Z5A8 133 aa17.37■□□□□ 0.37
RAPGEF1-203ENST00000372195 CELA1Q9UNI1 258 aa17.37■□□□□ 0.37
RAPGEF1-203ENST00000372195 MRPS36P82909 103 aaKnown RBP17.37■□□□□ 0.37
RAPGEF1-203ENST00000372195 UBE2D3P61077 147 aa17.36■□□□□ 0.37
RAPGEF1-203ENST00000372195 UBE2D2P62837 147 aa17.36■□□□□ 0.37
RAPGEF1-203ENST00000372195 RETNQ9HD89 108 aa17.36■□□□□ 0.37
RAPGEF1-203ENST00000372195 ZNF580Q9UK33 172 aa17.36■□□□□ 0.37
RAPGEF1-203ENST00000372195 TSPEAR-AS2P59090 65 aa17.36■□□□□ 0.37
RAPGEF1-203ENST00000372195 ZNF73O43830 326 aaPredicted RBP17.36■□□□□ 0.37
RAPGEF1-203ENST00000372195 OXLD1Q5BKU9 147 aa17.36■□□□□ 0.37
RAPGEF1-203ENST00000372195 CYSRT1A8MQ03 144 aa17.35■□□□□ 0.37
RAPGEF1-203ENST00000372195 A6NED7 52 aa17.35■□□□□ 0.37
RAPGEF1-203ENST00000372195 ARHGAP32A7KAX9 2087 aa17.35■□□□□ 0.37
RAPGEF1-203ENST00000372195 KIR2DL5BQ8NHK3 375 aa17.35■□□□□ 0.37
RAPGEF1-203ENST00000372195 A0A087WVE0 104 aa17.34■□□□□ 0.37
RAPGEF1-203ENST00000372195 V9GYY9 64 aa17.34■□□□□ 0.37
RAPGEF1-203ENST00000372195 MUC6Q6W4X9 2439 aa17.34■□□□□ 0.37
RAPGEF1-203ENST00000372195 SHISA2Q6UWI4 295 aa17.33■□□□□ 0.36
RAPGEF1-203ENST00000372195 UNQ6190/PRO20217Q6UXQ8 127 aa17.33■□□□□ 0.36
RAPGEF1-203ENST00000372195 DHRS4-AS1Q9P1J3 65 aa17.33■□□□□ 0.36
RAPGEF1-203ENST00000372195 A0A087WYN8 130 aa17.32■□□□□ 0.36
RAPGEF1-203ENST00000372195 PLAC8L1A1L4L8 177 aa17.32■□□□□ 0.36
RAPGEF1-203ENST00000372195 IMUPQ9GZP8 106 aa17.32■□□□□ 0.36
RAPGEF1-203ENST00000372195 LINC00242Q5T6M2 205 aa17.32■□□□□ 0.36
RAPGEF1-203ENST00000372195 PTPRSQ13332 1948 aa17.31■□□□□ 0.36
RAPGEF1-203ENST00000372195 EML5Q05BV3 1969 aa17.31■□□□□ 0.36
RAPGEF1-203ENST00000372195 WNK1Q9H4A3 2382 aa17.31■□□□□ 0.36
RAPGEF1-203ENST00000372195 LOC107984640A0A0U1RRK4 108 aa17.29■□□□□ 0.36
RAPGEF1-203ENST00000372195 C7orf33Q8WU49 177 aa17.29■□□□□ 0.36
RAPGEF1-203ENST00000372195 RAI1Q7Z5J4 1906 aaPredicted RBP17.29■□□□□ 0.36
RAPGEF1-203ENST00000372195 LY6G6CO95867 125 aa17.29■□□□□ 0.36
RAPGEF1-203ENST00000372195 CHCHD7Q9BUK0 85 aa17.29■□□□□ 0.36
RAPGEF1-203ENST00000372195 IGLV4-60A0A075B6I1 120 aa17.29■□□□□ 0.36
RAPGEF1-203ENST00000372195 Q8IZM0 81 aa17.28■□□□□ 0.36
RAPGEF1-203ENST00000372195 ADAMTSL4-AS1Q5T5F5 129 aa17.28■□□□□ 0.36
RAPGEF1-203ENST00000372195 SOSTDC1Q6X4U4 206 aa17.28■□□□□ 0.36
RAPGEF1-203ENST00000372195 KRTAP10-9P60411 292 aa17.27■□□□□ 0.36
RAPGEF1-203ENST00000372195 PRO3102Q9H379 93 aa17.27■□□□□ 0.36
RAPGEF1-203ENST00000372195 CNFNQ9BYD5 112 aa17.27■□□□□ 0.36
RAPGEF1-203ENST00000372195 COX17Q14061 63 aa17.27■□□□□ 0.35
RAPGEF1-203ENST00000372195 NDUFC1O43677 76 aa17.26■□□□□ 0.35
RAPGEF1-203ENST00000372195 M0QXV9 152 aa17.26■□□□□ 0.35
RAPGEF1-203ENST00000372195 MRGPRG-AS1Q2M3A8 158 aa17.26■□□□□ 0.35
RAPGEF1-203ENST00000372195 ODF3L2Q3SX64 289 aa17.26■□□□□ 0.35
RAPGEF1-203ENST00000372195 Q6JHZ5 121 aa17.26■□□□□ 0.35
RAPGEF1-203ENST00000372195 Q6Q795 121 aa17.26■□□□□ 0.35
RAPGEF1-203ENST00000372195 HIVEP2P31629 2446 aa17.26■□□□□ 0.35
RAPGEF1-203ENST00000372195 SMIM1B2RUZ4 78 aa17.25■□□□□ 0.35
RAPGEF1-203ENST00000372195 ATP5EP56381 51 aaPredicted RBP17.25■□□□□ 0.35
RAPGEF1-203ENST00000372195 PRR15LQ9BU68 103 aa17.25■□□□□ 0.35
RAPGEF1-203ENST00000372195 Q6ZSN1 163 aa17.24■□□□□ 0.35
RAPGEF1-203ENST00000372195 BRI3O95415 125 aa17.23■□□□□ 0.35
RAPGEF1-203ENST00000372195 C6orf223Q8N319 242 aa17.23■□□□□ 0.35
RAPGEF1-203ENST00000372195 TRBV10-3A0A0K0K1G6 114 aa17.22■□□□□ 0.35
RAPGEF1-203ENST00000372195 PLA2G2AP14555 144 aa17.22■□□□□ 0.35
RAPGEF1-203ENST00000372195 RETNLBQ9BQ08 111 aa17.22■□□□□ 0.35
RAPGEF1-203ENST00000372195 Q8N814 137 aa17.21■□□□□ 0.35
RAPGEF1-203ENST00000372195 CPAMD8Q8IZJ3 1885 aa17.2■□□□□ 0.34
RAPGEF1-203ENST00000372195 LRP4O75096 1905 aa17.19■□□□□ 0.34
RAPGEF1-203ENST00000372195 NTM-AS1Q6ZSK4 140 aa17.19■□□□□ 0.34
RAPGEF1-203ENST00000372195 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP17.19■□□□□ 0.34
RAPGEF1-203ENST00000372195 C1orf195Q5TG92 126 aa17.19■□□□□ 0.34
RAPGEF1-203ENST00000372195 K7ERS5 55 aa17.18■□□□□ 0.34
RAPGEF1-203ENST00000372195 OTOGLQ3ZCN5 2332 aa17.18■□□□□ 0.34
RAPGEF1-203ENST00000372195 Q8N9L7 120 aa17.18■□□□□ 0.34
RAPGEF1-203ENST00000372195 SPG11Q96JI7 2443 aa17.17■□□□□ 0.34
RAPGEF1-203ENST00000372195 ZNF706Q9Y5V0 76 aaPredicted RBP17.16■□□□□ 0.34
RAPGEF1-203ENST00000372195 C10orf25Q5T742 122 aa17.15■□□□□ 0.34
RAPGEF1-203ENST00000372195 EXPH5Q8NEV8 1989 aa17.15■□□□□ 0.34
RAPGEF1-203ENST00000372195 BDP1A6H8Y1 2624 aa17.14■□□□□ 0.33
RAPGEF1-203ENST00000372195 A0A096LNJ9 63 aa17.14■□□□□ 0.33
RAPGEF1-203ENST00000372195 FHL2Q14192 279 aa17.14■□□□□ 0.33
RAPGEF1-203ENST00000372195 DEFB116Q30KQ4 102 aa17.14■□□□□ 0.33
RAPGEF1-203ENST00000372195 ESRGQ1W209 222 aa17.13■□□□□ 0.33
RAPGEF1-203ENST00000372195 A8MTW9 85 aa17.13■□□□□ 0.33
RAPGEF1-203ENST00000372195 ANKHD1Q8IWZ3 2542 aaKnown RBP17.12■□□□□ 0.33
RAPGEF1-203ENST00000372195 SORL1Q92673 2214 aa17.12■□□□□ 0.33
RAPGEF1-203ENST00000372195 CSPG4Q6UVK1 2322 aa17.11■□□□□ 0.33
RAPGEF1-203ENST00000372195 A0A1W2PPR1 153 aa17.11■□□□□ 0.33
RAPGEF1-203ENST00000372195 CIRBP-AS1Q8TBR5 109 aa17.11■□□□□ 0.33
RAPGEF1-203ENST00000372195 C1orf137Q5JT78 98 aa17.09■□□□□ 0.33
RAPGEF1-203ENST00000372195 REG3GQ6UW15 175 aa17.09■□□□□ 0.33
RAPGEF1-203ENST00000372195 TRAV7A0A075B6U4 112 aa17.09■□□□□ 0.33
RAPGEF1-203ENST00000372195 LINC00208Q96KT6 92 aa17.09■□□□□ 0.33
RAPGEF1-203ENST00000372195 Q6ZTC4 211 aa17.09■□□□□ 0.33
RAPGEF1-203ENST00000372195 RPL28P46779 137 aaKnown RBP17.08■□□□□ 0.32
RAPGEF1-203ENST00000372195 SERP1Q9Y6X1 66 aa17.08■□□□□ 0.32
RAPGEF1-203ENST00000372195 SMIM26A0A096LP01 95 aa17.06■□□□□ 0.32
RAPGEF1-203ENST00000372195 IGHV6-1A0A0B4J1U7 121 aa17.06■□□□□ 0.32
RAPGEF1-203ENST00000372195 AMELXQ99217 191 aa17.05■□□□□ 0.32
RAPGEF1-203ENST00000372195 PSPHP1O15172 72 aa17.04■□□□□ 0.32
RAPGEF1-203ENST00000372195 IGLV1-51P01701 117 aa17.03■□□□□ 0.32
RAPGEF1-203ENST00000372195 PCOTHQ58A44 107 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms