RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 UBE2D1P51668 147 aa10.4□□□□□ -0.75
RAPGEF1-202ENST00000372190 CHCHD10Q8WYQ3 142 aaPredicted RBP10.4□□□□□ -0.75
RAPGEF1-202ENST00000372190 DEFB114Q30KQ6 69 aa10.39□□□□□ -0.75
RAPGEF1-202ENST00000372190 RPL28P46779 137 aaKnown RBP10.39□□□□□ -0.75
RAPGEF1-202ENST00000372190 DEFB1P60022 68 aa10.39□□□□□ -0.75
RAPGEF1-202ENST00000372190 PSMG3-AS1Q96PY0 264 aa10.39□□□□□ -0.75
RAPGEF1-202ENST00000372190 A0A0J9YX75 114 aa10.39□□□□□ -0.75
RAPGEF1-202ENST00000372190 PRO0255Q9UI72 69 aa10.39□□□□□ -0.75
RAPGEF1-202ENST00000372190 LRP4O75096 1905 aa10.39□□□□□ -0.75
RAPGEF1-202ENST00000372190 MED13LQ71F56 2210 aa10.39□□□□□ -0.75
RAPGEF1-202ENST00000372190 LINC00322Q6ZN03 302 aaPredicted RBP10.39□□□□□ -0.75
RAPGEF1-202ENST00000372190 M0R378 163 aa10.39□□□□□ -0.75
RAPGEF1-202ENST00000372190 EIF4EBP1Q13541 118 aaPredicted RBP10.38□□□□□ -0.75
RAPGEF1-202ENST00000372190 LINC00467Q9BRT7 94 aa10.38□□□□□ -0.75
RAPGEF1-202ENST00000372190 LINC00482Q8N8I6 264 aa10.37□□□□□ -0.75
RAPGEF1-202ENST00000372190 TP53TG3Q9ULZ0 132 aa10.37□□□□□ -0.75
RAPGEF1-202ENST00000372190 LINC01547P58512 204 aaPredicted RBP10.37□□□□□ -0.75
RAPGEF1-202ENST00000372190 LY6LH3BQJ8 138 aa10.37□□□□□ -0.75
RAPGEF1-202ENST00000372190 ZNF295-AS1Q8N0V1 137 aa10.37□□□□□ -0.75
RAPGEF1-202ENST00000372190 C10orf99Q6UWK7 81 aa10.37□□□□□ -0.75
RAPGEF1-202ENST00000372190 U3KQK5 164 aa10.37□□□□□ -0.75
RAPGEF1-202ENST00000372190 ZNF80P51504 273 aaPredicted RBP10.37□□□□□ -0.75
RAPGEF1-202ENST00000372190 X6R8D5 127 aa10.36□□□□□ -0.75
RAPGEF1-202ENST00000372190 ACACBO00763 2458 aa10.36□□□□□ -0.75
RAPGEF1-202ENST00000372190 BBC3Q96PG8 261 aaPredicted RBP10.36□□□□□ -0.75
RAPGEF1-202ENST00000372190 MED12LQ86YW9 2145 aa10.36□□□□□ -0.75
RAPGEF1-202ENST00000372190 SPINK1P00995 79 aa10.35□□□□□ -0.75
RAPGEF1-202ENST00000372190 DEFB131BA0A096LNP1 70 aa10.35□□□□□ -0.75
RAPGEF1-202ENST00000372190 FREM1Q5H8C1 2179 aa10.35□□□□□ -0.75
RAPGEF1-202ENST00000372190 PLA2G1BP04054 148 aaKnown RBP10.35□□□□□ -0.75
RAPGEF1-202ENST00000372190 Q6ZPA2 131 aa10.35□□□□□ -0.75
RAPGEF1-202ENST00000372190 BRWD1-AS2P59051 145 aa10.34□□□□□ -0.75
RAPGEF1-202ENST00000372190 HCG22E2RYF7 251 aa10.33□□□□□ -0.76
RAPGEF1-202ENST00000372190 ATP11AUNQ6ZP68 121 aa10.32□□□□□ -0.76
RAPGEF1-202ENST00000372190 ARHGAP21Q5T5U3 1957 aa10.32□□□□□ -0.76
RAPGEF1-202ENST00000372190 CRIP3Q6Q6R5 217 aa10.31□□□□□ -0.76
RAPGEF1-202ENST00000372190 NOTCH2Q04721 2471 aa10.31□□□□□ -0.76
RAPGEF1-202ENST00000372190 C10orf25Q5T742 122 aa10.31□□□□□ -0.76
RAPGEF1-202ENST00000372190 Q6ZS46 218 aa10.31□□□□□ -0.76
RAPGEF1-202ENST00000372190 MUC7Q8TAX7 377 aa10.31□□□□□ -0.76
RAPGEF1-202ENST00000372190 C1orf229Q6ZS94 237 aaPredicted RBP10.3□□□□□ -0.76
RAPGEF1-202ENST00000372190 BCE1O60756 84 aa10.3□□□□□ -0.76
RAPGEF1-202ENST00000372190 COX17Q14061 63 aa10.3□□□□□ -0.76
RAPGEF1-202ENST00000372190 IGKV2-28A0A075B6P5 120 aa10.3□□□□□ -0.76
RAPGEF1-202ENST00000372190 IGKV2D-28P01615 120 aa10.3□□□□□ -0.76
RAPGEF1-202ENST00000372190 K7EQG2 157 aa10.3□□□□□ -0.76
RAPGEF1-202ENST00000372190 Q8N814 137 aa10.3□□□□□ -0.76
RAPGEF1-202ENST00000372190 PTPN13Q12923 2485 aa10.29□□□□□ -0.76
RAPGEF1-202ENST00000372190 ANKHD1Q8IWZ3 2542 aaKnown RBP10.29□□□□□ -0.76
RAPGEF1-202ENST00000372190 CRIP2P52943 208 aaPredicted RBP10.29□□□□□ -0.76
RAPGEF1-202ENST00000372190 PIEZO1Q92508 2521 aa10.29□□□□□ -0.76
RAPGEF1-202ENST00000372190 AVPP01185 164 aa10.28□□□□□ -0.76
RAPGEF1-202ENST00000372190 C18orf65Q6ZTR6 163 aa10.28□□□□□ -0.76
RAPGEF1-202ENST00000372190 C1orf137Q5JT78 98 aa10.28□□□□□ -0.76
RAPGEF1-202ENST00000372190 CDIP1Q9H305 208 aa10.28□□□□□ -0.76
RAPGEF1-202ENST00000372190 SYCNQ0VAF6 134 aa10.28□□□□□ -0.76
RAPGEF1-202ENST00000372190 ODF3Q96PU9 254 aa10.28□□□□□ -0.76
RAPGEF1-202ENST00000372190 NCOR2Q9Y618 2525 aa10.28□□□□□ -0.76
RAPGEF1-202ENST00000372190 TRAV10A0A0B4J240 114 aa10.27□□□□□ -0.76
RAPGEF1-202ENST00000372190 Q6ZTI0 123 aa10.27□□□□□ -0.77
RAPGEF1-202ENST00000372190 C1orf64Q8NEQ6 169 aa10.27□□□□□ -0.77
RAPGEF1-202ENST00000372190 IGHV6-1A0A0B4J1U7 121 aa10.25□□□□□ -0.77
RAPGEF1-202ENST00000372190 IGLV9-49A0A0B4J1Y8 123 aa10.24□□□□□ -0.77
RAPGEF1-202ENST00000372190 LY6G6CO95867 125 aa10.24□□□□□ -0.77
RAPGEF1-202ENST00000372190 M0QY20 66 aa10.24□□□□□ -0.77
RAPGEF1-202ENST00000372190 LINC00575Q6W349 94 aa10.24□□□□□ -0.77
RAPGEF1-202ENST00000372190 CRIP1P50238 77 aa10.24□□□□□ -0.77
RAPGEF1-202ENST00000372190 LCA10Q71F78 164 aa10.24□□□□□ -0.77
RAPGEF1-202ENST00000372190 NOTCH3Q9UM47 2321 aa10.24□□□□□ -0.77
RAPGEF1-202ENST00000372190 ACYP2P14621 99 aa10.23□□□□□ -0.77
RAPGEF1-202ENST00000372190 SHANK1Q9Y566 2161 aa10.23□□□□□ -0.77
RAPGEF1-202ENST00000372190 SSBP3-AS1Q7Z2R9 100 aa10.23□□□□□ -0.77
RAPGEF1-202ENST00000372190 PCNX3Q9H6A9 2034 aa10.23□□□□□ -0.77
RAPGEF1-202ENST00000372190 TRBV6-8A0A0A6YYG3 113 aa10.23□□□□□ -0.77
RAPGEF1-202ENST00000372190 SPG11Q96JI7 2443 aa10.23□□□□□ -0.77
RAPGEF1-202ENST00000372190 LOC100131303A0A0U1RQF7 123 aa10.22□□□□□ -0.77
RAPGEF1-202ENST00000372190 PRLHP81277 87 aa10.22□□□□□ -0.77
RAPGEF1-202ENST00000372190 C7orf33Q8WU49 177 aa10.22□□□□□ -0.77
RAPGEF1-202ENST00000372190 Q9UF83 564 aa10.22□□□□□ -0.77
RAPGEF1-202ENST00000372190 A0A1W2PPR1 153 aa10.22□□□□□ -0.77
RAPGEF1-202ENST00000372190 LINC00846Q9NV44 126 aa10.22□□□□□ -0.77
RAPGEF1-202ENST00000372190 CD164L2Q6UWJ8 174 aa10.22□□□□□ -0.77
RAPGEF1-202ENST00000372190 A0A087WYN8 130 aa10.21□□□□□ -0.77
RAPGEF1-202ENST00000372190 IGLV1-40P01703 118 aa10.21□□□□□ -0.77
RAPGEF1-202ENST00000372190 EDN2P20800 178 aa10.2□□□□□ -0.78
RAPGEF1-202ENST00000372190 CYP4F30PQ9H0H9 118 aa10.2□□□□□ -0.78
RAPGEF1-202ENST00000372190 DSCAML1Q8TD84 2053 aa10.2□□□□□ -0.78
RAPGEF1-202ENST00000372190 TRBV6-4A0A1B0GX49 114 aa10.2□□□□□ -0.78
RAPGEF1-202ENST00000372190 KTN1-AS1Q86SY8 53 aa10.2□□□□□ -0.78
RAPGEF1-202ENST00000372190 C7orf65Q6ZTY9 151 aa10.2□□□□□ -0.78
RAPGEF1-202ENST00000372190 IGF2RP11717 2491 aa10.19□□□□□ -0.78
RAPGEF1-202ENST00000372190 IGLV4-69A0A075B6H9 119 aa10.19□□□□□ -0.78
RAPGEF1-202ENST00000372190 IGLV2-11P01706 119 aa10.19□□□□□ -0.78
RAPGEF1-202ENST00000372190 CACNA1AO00555 2505 aa10.19□□□□□ -0.78
RAPGEF1-202ENST00000372190 M0R2N4 97 aa10.19□□□□□ -0.78
RAPGEF1-202ENST00000372190 IGLV2-18A0A075B6J9 118 aa10.19□□□□□ -0.78
RAPGEF1-202ENST00000372190 PRRC2AP48634 2157 aaKnown RBP10.19□□□□□ -0.78
RAPGEF1-202ENST00000372190 NCOA6Q14686 2063 aaPredicted RBP10.18□□□□□ -0.78
RAPGEF1-202ENST00000372190 TSHBP01222 138 aa10.18□□□□□ -0.78
RAPGEF1-202ENST00000372190 C16orf95Q9H693 158 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms