RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 A0A0J9YXY3 114 aa14.01□□□□□ -0.17
LHX3-202ENST00000371748 DEFB135Q30KP9 77 aa14.01□□□□□ -0.17
LHX3-202ENST00000371748 IGHV3-30-3P0DP02 117 aa14□□□□□ -0.17
LHX3-202ENST00000371748 KIR2DL5BQ8NHK3 375 aa14□□□□□ -0.17
LHX3-202ENST00000371748 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.99□□□□□ -0.17
LHX3-202ENST00000371748 TMEM262E9PQX1 116 aa13.99□□□□□ -0.17
LHX3-202ENST00000371748 LITAFQ99732 161 aa13.99□□□□□ -0.17
LHX3-202ENST00000371748 WFDC9Q8NEX5 89 aa13.98□□□□□ -0.17
LHX3-202ENST00000371748 LINC00612Q8N6U2 182 aa13.98□□□□□ -0.17
LHX3-202ENST00000371748 SMIM9A6NGZ8 99 aa13.97□□□□□ -0.17
LHX3-202ENST00000371748 TMEM243Q9BU79 118 aa13.97□□□□□ -0.17
LHX3-202ENST00000371748 IGHV1-58A0A0C4DH39 117 aa13.96□□□□□ -0.17
LHX3-202ENST00000371748 A8MZ25 164 aa13.96□□□□□ -0.17
LHX3-202ENST00000371748 UBE2L6O14933 153 aa13.96□□□□□ -0.17
LHX3-202ENST00000371748 DEFB4AO15263 64 aa13.96□□□□□ -0.17
LHX3-202ENST00000371748 Q1RN00 199 aa13.96□□□□□ -0.17
LHX3-202ENST00000371748 COX6A2Q02221 97 aa13.96□□□□□ -0.18
LHX3-202ENST00000371748 ATXN8Q156A1 80 aa13.96□□□□□ -0.18
LHX3-202ENST00000371748 LINC01620Q4KN68 170 aa13.96□□□□□ -0.18
LHX3-202ENST00000371748 CDKN2A-AS1Q9UH64 79 aa13.96□□□□□ -0.18
LHX3-202ENST00000371748 CSDC2Q9Y534 153 aaKnown RBP13.96□□□□□ -0.18
LHX3-202ENST00000371748 APOC4P55056 127 aa13.95□□□□□ -0.18
LHX3-202ENST00000371748 TRBV30A0A0K0K1B3 111 aa13.95□□□□□ -0.18
LHX3-202ENST00000371748 FAM222AQ5U5X8 452 aa13.95□□□□□ -0.18
LHX3-202ENST00000371748 TRIAP1O43715 76 aa13.94□□□□□ -0.18
LHX3-202ENST00000371748 NTN5Q8WTR8 489 aaPredicted RBP13.94□□□□□ -0.18
LHX3-202ENST00000371748 VSIG2Q96IQ7 327 aa13.94□□□□□ -0.18
LHX3-202ENST00000371748 LINC01600Q96MT4 127 aa13.94□□□□□ -0.18
LHX3-202ENST00000371748 CDC42SE2Q9NRR3 84 aa13.94□□□□□ -0.18
LHX3-202ENST00000371748 TRAV13-1A0A0B4J241 112 aa13.94□□□□□ -0.18
LHX3-202ENST00000371748 TIRAPP58753 221 aa13.94□□□□□ -0.18
LHX3-202ENST00000371748 ADAMTSL4-AS1Q5T5F5 129 aa13.94□□□□□ -0.18
LHX3-202ENST00000371748 RNF183Q96D59 192 aa13.94□□□□□ -0.18
LHX3-202ENST00000371748 LINC00242Q5T6M2 205 aa13.93□□□□□ -0.18
LHX3-202ENST00000371748 KRTAP24-1Q3LI83 254 aa13.92□□□□□ -0.18
LHX3-202ENST00000371748 ZFAND6Q6FIF0 208 aa13.92□□□□□ -0.18
LHX3-202ENST00000371748 IGLV5-45A0A087WSX0 123 aa13.91□□□□□ -0.18
LHX3-202ENST00000371748 PRSS2P07478 247 aa13.91□□□□□ -0.18
LHX3-202ENST00000371748 GAGE6Q13070 117 aa13.91□□□□□ -0.18
LHX3-202ENST00000371748 TEX49A0A1B0GTD5 131 aa13.91□□□□□ -0.18
LHX3-202ENST00000371748 TMEM101Q96IK0 257 aa13.91□□□□□ -0.18
LHX3-202ENST00000371748 TRBV6-8A0A0A6YYG3 113 aa13.9□□□□□ -0.18
LHX3-202ENST00000371748 IGHV4-28A0A0C4DH34 117 aa13.9□□□□□ -0.18
LHX3-202ENST00000371748 TRBV10-2A0A0K0K1G8 114 aa13.9□□□□□ -0.18
LHX3-202ENST00000371748 WIPF1O43516 503 aa13.9□□□□□ -0.18
LHX3-202ENST00000371748 GYPEP15421 78 aa13.9□□□□□ -0.18
LHX3-202ENST00000371748 NDUFA12Q9UI09 145 aa13.9□□□□□ -0.18
LHX3-202ENST00000371748 IGHV4-30-4P0DP06 118 aa13.9□□□□□ -0.18
LHX3-202ENST00000371748 RPL13AP40429 203 aaKnown RBP13.9□□□□□ -0.18
LHX3-202ENST00000371748 HERVK_113P63121 156 aa13.9□□□□□ -0.18
LHX3-202ENST00000371748 SPANXDQ9BXN6 97 aa13.9□□□□□ -0.18
LHX3-202ENST00000371748 SPANXCQ9NY87 97 aa13.9□□□□□ -0.18
LHX3-202ENST00000371748 LYRM9A8MSI8 78 aa13.89□□□□□ -0.19
LHX3-202ENST00000371748 FAM19A3Q7Z5A8 133 aa13.88□□□□□ -0.19
LHX3-202ENST00000371748 ANAPC13Q9BS18 74 aa13.88□□□□□ -0.19
LHX3-202ENST00000371748 CHCHD5Q9BSY4 110 aa13.88□□□□□ -0.19
LHX3-202ENST00000371748 OXLD1Q5BKU9 147 aa13.88□□□□□ -0.19
LHX3-202ENST00000371748 ICOSQ9Y6W8 199 aa13.88□□□□□ -0.19
LHX3-202ENST00000371748 H7C423 109 aa13.87□□□□□ -0.19
LHX3-202ENST00000371748 MIAQ16674 131 aa13.87□□□□□ -0.19
LHX3-202ENST00000371748 PRO0255Q9UI72 69 aa13.87□□□□□ -0.19
LHX3-202ENST00000371748 FBN1P35555 2871 aaKnown RBP13.86□□□□□ -0.19
LHX3-202ENST00000371748 IGLV4-60A0A075B6I1 120 aa13.86□□□□□ -0.19
LHX3-202ENST00000371748 A0A096LPF7 62 aa13.86□□□□□ -0.19
LHX3-202ENST00000371748 Q8NAQ8 132 aa13.86□□□□□ -0.19
LHX3-202ENST00000371748 NHLRC4P0CG21 123 aaPredicted RBP13.85□□□□□ -0.19
LHX3-202ENST00000371748 NPC2P61916 151 aa13.85□□□□□ -0.19
LHX3-202ENST00000371748 CELA1Q9UNI1 258 aa13.85□□□□□ -0.19
LHX3-202ENST00000371748 IGKV3OR2-268A0A0C4DH90 116 aa13.85□□□□□ -0.19
LHX3-202ENST00000371748 SNCGO76070 127 aa13.84□□□□□ -0.19
LHX3-202ENST00000371748 UBE2WQ96B02 151 aa13.83□□□□□ -0.19
LHX3-202ENST00000371748 SMIM1B2RUZ4 78 aa13.83□□□□□ -0.2
LHX3-202ENST00000371748 PAX4O43316 350 aa13.83□□□□□ -0.2
LHX3-202ENST00000371748 MIFP14174 115 aa13.83□□□□□ -0.2
LHX3-202ENST00000371748 DAD1P61803 113 aa13.83□□□□□ -0.2
LHX3-202ENST00000371748 GAGE2BQ13066 116 aa13.83□□□□□ -0.2
LHX3-202ENST00000371748 GAGE2EQ4V326 116 aa13.83□□□□□ -0.2
LHX3-202ENST00000371748 C2orf82Q6UX34 121 aa13.83□□□□□ -0.2
LHX3-202ENST00000371748 GAGE2DQ9UEU5 116 aa13.83□□□□□ -0.2
LHX3-202ENST00000371748 IGLV5-39A0A0G2JS06 123 aa13.82□□□□□ -0.2
LHX3-202ENST00000371748 TRAV8-4A0A0B4J246 113 aa13.82□□□□□ -0.2
LHX3-202ENST00000371748 CMYA5Q8N3K9 4069 aa13.82□□□□□ -0.2
LHX3-202ENST00000371748 KRTAP10-11P60412 298 aa13.81□□□□□ -0.2
LHX3-202ENST00000371748 C3orf56Q8N813 242 aa13.81□□□□□ -0.2
LHX3-202ENST00000371748 CLEC2BQ92478 149 aa13.81□□□□□ -0.2
LHX3-202ENST00000371748 F5H768 121 aa13.81□□□□□ -0.2
LHX3-202ENST00000371748 COX6CP09669 75 aa13.81□□□□□ -0.2
LHX3-202ENST00000371748 STAB1Q9NY15 2570 aa13.81□□□□□ -0.2
LHX3-202ENST00000371748 H3BT86 120 aa13.8□□□□□ -0.2
LHX3-202ENST00000371748 NDUFA1O15239 70 aa13.8□□□□□ -0.2
LHX3-202ENST00000371748 CYSRT1A8MQ03 144 aa13.79□□□□□ -0.2
LHX3-202ENST00000371748 LST1O00453 97 aa13.79□□□□□ -0.2
LHX3-202ENST00000371748 NDUFV3P56181 108 aaKnown RBP13.79□□□□□ -0.2
LHX3-202ENST00000371748 DAND5Q8N907 189 aa13.79□□□□□ -0.2
LHX3-202ENST00000371748 TIMM17BO60830 172 aa13.79□□□□□ -0.2
LHX3-202ENST00000371748 Q9H8V8 135 aa13.79□□□□□ -0.2
LHX3-202ENST00000371748 Q6Q795 121 aa13.78□□□□□ -0.2
LHX3-202ENST00000371748 ZNF625Q96I27 306 aaPredicted RBP13.78□□□□□ -0.2
LHX3-202ENST00000371748 ATP5G1P05496 136 aa13.77□□□□□ -0.21
LHX3-202ENST00000371748 C15orf53Q8NAA6 179 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms