RNA–Protein interactions for RNA: ENST00000367338.7

CACNA1S-202, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1S, Length 5,996 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-202ENST00000367338 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.09□□□□□ -1.27
CACNA1S-202ENST00000367338 NACAE9PAV3 2078 aa7.09□□□□□ -1.27
CACNA1S-202ENST00000367338 C18orf65Q6ZTR6 163 aa7.09□□□□□ -1.27
CACNA1S-202ENST00000367338 FAM19A5Q7Z5A7 132 aaPredicted RBP7.09□□□□□ -1.27
CACNA1S-202ENST00000367338 SPTAN1Q13813 2472 aaKnown RBP7.09□□□□□ -1.28
CACNA1S-202ENST00000367338 FAM19A3Q7Z5A8 133 aa7.08□□□□□ -1.28
CACNA1S-202ENST00000367338 C6orf99Q4VX62 202 aa7.08□□□□□ -1.28
CACNA1S-202ENST00000367338 CHCHD7Q9BUK0 85 aa7.08□□□□□ -1.28
CACNA1S-202ENST00000367338 CCDC179H3BU77 68 aa7.08□□□□□ -1.28
CACNA1S-202ENST00000367338 LST1O00453 97 aa7.08□□□□□ -1.28
CACNA1S-202ENST00000367338 F8WDY8 70 aa7.07□□□□□ -1.28
CACNA1S-202ENST00000367338 POM121L12Q8N7R1 296 aa7.07□□□□□ -1.28
CACNA1S-202ENST00000367338 Q8IZM0 81 aa7.07□□□□□ -1.28
CACNA1S-202ENST00000367338 KIF25-AS1Q9Y6Z4 181 aa7.07□□□□□ -1.28
CACNA1S-202ENST00000367338 SERP1Q9Y6X1 66 aa7.07□□□□□ -1.28
CACNA1S-202ENST00000367338 CEP350Q5VT06 3117 aa7.07□□□□□ -1.28
CACNA1S-202ENST00000367338 HTTP42858 3142 aa7.06□□□□□ -1.28
CACNA1S-202ENST00000367338 NOTCH3Q9UM47 2321 aa7.06□□□□□ -1.28
CACNA1S-202ENST00000367338 M0QXV9 152 aa7.06□□□□□ -1.28
CACNA1S-202ENST00000367338 AMELXQ99217 191 aa7.06□□□□□ -1.28
CACNA1S-202ENST00000367338 COL27A1Q8IZC6 1860 aaPredicted RBP7.06□□□□□ -1.28
CACNA1S-202ENST00000367338 LINC00959A0A1B0GUT2 108 aa7.06□□□□□ -1.28
CACNA1S-202ENST00000367338 Q6JHZ5 121 aa7.06□□□□□ -1.28
CACNA1S-202ENST00000367338 UBE2D3P61077 147 aa7.05□□□□□ -1.28
CACNA1S-202ENST00000367338 UBE2D2P62837 147 aa7.05□□□□□ -1.28
CACNA1S-202ENST00000367338 LINC01006Q8NI28 216 aa7.05□□□□□ -1.28
CACNA1S-202ENST00000367338 RETNQ9HD89 108 aa7.05□□□□□ -1.28
CACNA1S-202ENST00000367338 MED13LQ71F56 2210 aa7.05□□□□□ -1.28
CACNA1S-202ENST00000367338 Q8N9L7 120 aa7.05□□□□□ -1.28
CACNA1S-202ENST00000367338 NDUFA7O95182 113 aa7.05□□□□□ -1.28
CACNA1S-202ENST00000367338 PLA2G1BP04054 148 aaKnown RBP7.05□□□□□ -1.28
CACNA1S-202ENST00000367338 BEAN1Q3B7T3 259 aa7.05□□□□□ -1.28
CACNA1S-202ENST00000367338 WFDC10BQ8IUB3 73 aa7.05□□□□□ -1.28
CACNA1S-202ENST00000367338 SLPIP03973 132 aa7.04□□□□□ -1.28
CACNA1S-202ENST00000367338 BBC3Q96PG8 261 aaPredicted RBP7.04□□□□□ -1.28
CACNA1S-202ENST00000367338 C1orf158Q8N1D5 194 aa7.04□□□□□ -1.28
CACNA1S-202ENST00000367338 KPRPQ5T749 579 aaPredicted RBP7.04□□□□□ -1.28
CACNA1S-202ENST00000367338 ARHGAP32A7KAX9 2087 aa7.04□□□□□ -1.28
CACNA1S-202ENST00000367338 ODF3L2Q3SX64 289 aa7.04□□□□□ -1.28
CACNA1S-202ENST00000367338 XAGE1AQ9HD64 81 aa7.04□□□□□ -1.28
CACNA1S-202ENST00000367338 INAFM1C9JVW0 142 aa7.03□□□□□ -1.28
CACNA1S-202ENST00000367338 ZNF73O43830 326 aaPredicted RBP7.03□□□□□ -1.28
CACNA1S-202ENST00000367338 Q8N2B8 174 aa7.03□□□□□ -1.28
CACNA1S-202ENST00000367338 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.03□□□□□ -1.28
CACNA1S-202ENST00000367338 Q6Q795 121 aa7.03□□□□□ -1.28
CACNA1S-202ENST00000367338 CSDC2Q9Y534 153 aaKnown RBP7.03□□□□□ -1.28
CACNA1S-202ENST00000367338 TSPEAR-AS2P59090 65 aa7.03□□□□□ -1.28
CACNA1S-202ENST00000367338 Q6ZQY7 126 aa7.03□□□□□ -1.28
CACNA1S-202ENST00000367338 CDC42SE2Q9NRR3 84 aa7.03□□□□□ -1.28
CACNA1S-202ENST00000367338 C16orf95Q9H693 158 aa7.03□□□□□ -1.28
CACNA1S-202ENST00000367338 CREBBPQ92793 2442 aa7.03□□□□□ -1.28
CACNA1S-202ENST00000367338 A0A0J9YWU9 116 aa7.02□□□□□ -1.29
CACNA1S-202ENST00000367338 COX7CP15954 63 aa7.02□□□□□ -1.29
CACNA1S-202ENST00000367338 XGP55808 180 aa7.02□□□□□ -1.29
CACNA1S-202ENST00000367338 SCXQ7RTU7 201 aa7.02□□□□□ -1.29
CACNA1S-202ENST00000367338 LINC00315P59091 139 aa7.02□□□□□ -1.29
CACNA1S-202ENST00000367338 EGFEM1PQ0D2K5 195 aa7.01□□□□□ -1.29
CACNA1S-202ENST00000367338 CENPFP49454 3210 aa7.01□□□□□ -1.29
CACNA1S-202ENST00000367338 A8MZ25 164 aa7.01□□□□□ -1.29
CACNA1S-202ENST00000367338 PRYO14603 147 aa7.01□□□□□ -1.29
CACNA1S-202ENST00000367338 SMIM11BQ8TCY0 68 aa7.01□□□□□ -1.29
CACNA1S-202ENST00000367338 SPINK6Q6UWN8 80 aa7.01□□□□□ -1.29
CACNA1S-202ENST00000367338 PLAC8L1A1L4L8 177 aa7□□□□□ -1.29
CACNA1S-202ENST00000367338 LY6G6DO95868 133 aa7□□□□□ -1.29
CACNA1S-202ENST00000367338 LINC00694P0DN24 101 aa7□□□□□ -1.29
CACNA1S-202ENST00000367338 LINC00242Q5T6M2 205 aa7□□□□□ -1.29
CACNA1S-202ENST00000367338 C10orf25Q5T742 122 aa7□□□□□ -1.29
CACNA1S-202ENST00000367338 LINC00482Q8N8I6 264 aa7□□□□□ -1.29
CACNA1S-202ENST00000367338 PLA2G2AP14555 144 aa7□□□□□ -1.29
CACNA1S-202ENST00000367338 RPL28P46779 137 aaKnown RBP7□□□□□ -1.29
CACNA1S-202ENST00000367338 CHD7Q9P2D1 2997 aa7□□□□□ -1.29
CACNA1S-202ENST00000367338 PRM2P04554 102 aa7□□□□□ -1.29
CACNA1S-202ENST00000367338 DSCAML1Q8TD84 2053 aa7□□□□□ -1.29
CACNA1S-202ENST00000367338 C3orf84H3BNL1 204 aa6.99□□□□□ -1.29
CACNA1S-202ENST00000367338 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.99□□□□□ -1.29
CACNA1S-202ENST00000367338 X6R8D5 127 aa6.99□□□□□ -1.29
CACNA1S-202ENST00000367338 NUPR2A6NF83 97 aa6.99□□□□□ -1.29
CACNA1S-202ENST00000367338 IGLV1-51P01701 117 aa6.99□□□□□ -1.29
CACNA1S-202ENST00000367338 IGHV4-30-4P0DP06 118 aa6.99□□□□□ -1.29
CACNA1S-202ENST00000367338 IGKV2-28A0A075B6P5 120 aa6.99□□□□□ -1.29
CACNA1S-202ENST00000367338 IGKV2D-28P01615 120 aa6.99□□□□□ -1.29
CACNA1S-202ENST00000367338 WDR87Q6ZQQ6 2873 aa6.98□□□□□ -1.29
CACNA1S-202ENST00000367338 KRTAP10-9P60411 292 aa6.98□□□□□ -1.29
CACNA1S-202ENST00000367338 SMIM1B2RUZ4 78 aa6.98□□□□□ -1.29
CACNA1S-202ENST00000367338 LINC01561Q8N1V8 128 aa6.98□□□□□ -1.29
CACNA1S-202ENST00000367338 TRAV7A0A075B6U4 112 aa6.98□□□□□ -1.29
CACNA1S-202ENST00000367338 CHD9Q3L8U1 2897 aa6.98□□□□□ -1.29
CACNA1S-202ENST00000367338 A6NED7 52 aa6.97□□□□□ -1.29
CACNA1S-202ENST00000367338 WFDC13Q8IUB5 93 aa6.97□□□□□ -1.29
CACNA1S-202ENST00000367338 LOC100131303A0A0U1RQF7 123 aa6.97□□□□□ -1.29
CACNA1S-202ENST00000367338 SMIM26A0A096LP01 95 aa6.97□□□□□ -1.29
CACNA1S-202ENST00000367338 HRCT1Q6UXD1 115 aa6.96□□□□□ -1.29
CACNA1S-202ENST00000367338 NTM-AS1Q6ZSK4 140 aa6.96□□□□□ -1.29
CACNA1S-202ENST00000367338 Q6ZSN1 163 aa6.96□□□□□ -1.3
CACNA1S-202ENST00000367338 C11orf72Q8NBR9 251 aa6.96□□□□□ -1.3
CACNA1S-202ENST00000367338 WFDC10AQ9H1F0 79 aa6.96□□□□□ -1.3
CACNA1S-202ENST00000367338 COX6A2Q02221 97 aa6.95□□□□□ -1.3
CACNA1S-202ENST00000367338 CYSRT1A8MQ03 144 aa6.95□□□□□ -1.3
CACNA1S-202ENST00000367338 PPDPFQ9H3Y8 114 aa6.94□□□□□ -1.3
CACNA1S-202ENST00000367338 ADAMTSL4-AS1Q5T5F5 129 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms