RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 ZNF469Q96JG9 3925 aaPredicted RBP8.8□□□□□ -1
PTPN7-202ENST00000367279 TIMM17BO60830 172 aa8.79□□□□□ -1
PTPN7-202ENST00000367279 SOSTDC1Q6X4U4 206 aa8.79□□□□□ -1
PTPN7-202ENST00000367279 CHCHD5Q9BSY4 110 aa8.79□□□□□ -1
PTPN7-202ENST00000367279 C11orf68Q9H3H3 251 aaKnown RBP8.79□□□□□ -1
PTPN7-202ENST00000367279 CDC42SE2Q9NRR3 84 aa8.79□□□□□ -1
PTPN7-202ENST00000367279 IGLV5-45A0A087WSX0 123 aa8.78□□□□□ -1
PTPN7-202ENST00000367279 TRAV25A0A0B4J276 109 aa8.78□□□□□ -1
PTPN7-202ENST00000367279 TRBV10-1A0A0K0K1A3 114 aa8.78□□□□□ -1
PTPN7-202ENST00000367279 H3BT86 120 aa8.78□□□□□ -1
PTPN7-202ENST00000367279 DEFB130BP0DP73 79 aa8.78□□□□□ -1
PTPN7-202ENST00000367279 DEFB130AP0DP74 79 aa8.78□□□□□ -1
PTPN7-202ENST00000367279 CLUHP3Q96NS8 147 aa8.78□□□□□ -1
PTPN7-202ENST00000367279 UBR5O95071 2799 aaPredicted RBP8.77□□□□□ -1.01
PTPN7-202ENST00000367279 IGLV5-39A0A0G2JS06 123 aa8.77□□□□□ -1.01
PTPN7-202ENST00000367279 M0QXV9 152 aa8.76□□□□□ -1.01
PTPN7-202ENST00000367279 LINC00158P58513 81 aa8.76□□□□□ -1.01
PTPN7-202ENST00000367279 PFN2P35080 140 aa8.75□□□□□ -1.01
PTPN7-202ENST00000367279 LRRC75A-AS1Q8N1F1 130 aa8.75□□□□□ -1.01
PTPN7-202ENST00000367279 C5orf38Q86SI9 138 aa8.75□□□□□ -1.01
PTPN7-202ENST00000367279 COPS9Q8WXC6 57 aa8.75□□□□□ -1.01
PTPN7-202ENST00000367279 CITED1Q99966 193 aa8.75□□□□□ -1.01
PTPN7-202ENST00000367279 KRTAP1-3Q8IUG1 177 aa8.74□□□□□ -1.01
PTPN7-202ENST00000367279 MIR7-3HGQ8N6C7 128 aa8.74□□□□□ -1.01
PTPN7-202ENST00000367279 C16orf74Q96GX8 76 aa8.74□□□□□ -1.01
PTPN7-202ENST00000367279 COX7A2LO14548 114 aa8.74□□□□□ -1.01
PTPN7-202ENST00000367279 LINC01006Q8NI28 216 aa8.74□□□□□ -1.01
PTPN7-202ENST00000367279 IL17DQ8TAD2 202 aa8.74□□□□□ -1.01
PTPN7-202ENST00000367279 A0A096LPF7 62 aa8.74□□□□□ -1.01
PTPN7-202ENST00000367279 NBEAL2Q6ZNJ1 2754 aa8.74□□□□□ -1.01
PTPN7-202ENST00000367279 TMEM86BQ8N661 226 aa8.74□□□□□ -1.01
PTPN7-202ENST00000367279 Q9HAA7 133 aa8.74□□□□□ -1.01
PTPN7-202ENST00000367279 IGLV4-60A0A075B6I1 120 aa8.73□□□□□ -1.01
PTPN7-202ENST00000367279 F5H768 121 aa8.73□□□□□ -1.01
PTPN7-202ENST00000367279 CLPSL2Q6UWE3 100 aa8.73□□□□□ -1.01
PTPN7-202ENST00000367279 COX7B2Q8TF08 81 aa8.73□□□□□ -1.01
PTPN7-202ENST00000367279 GCN1Q92616 2671 aaKnown RBP8.73□□□□□ -1.01
PTPN7-202ENST00000367279 CRPP02741 224 aa8.73□□□□□ -1.01
PTPN7-202ENST00000367279 GIG44P09565 113 aaPredicted RBP8.73□□□□□ -1.01
PTPN7-202ENST00000367279 B5MCH6 92 aa8.72□□□□□ -1.01
PTPN7-202ENST00000367279 CSDC2Q9Y534 153 aaKnown RBP8.72□□□□□ -1.01
PTPN7-202ENST00000367279 BAALC-AS2P0C853 105 aa8.72□□□□□ -1.01
PTPN7-202ENST00000367279 NDUFV3P56181 108 aaKnown RBP8.72□□□□□ -1.01
PTPN7-202ENST00000367279 HERV-K104P63124 156 aa8.72□□□□□ -1.01
PTPN7-202ENST00000367279 OR13C6PQ8NH95 151 aa8.72□□□□□ -1.01
PTPN7-202ENST00000367279 AKAP9Q99996 3911 aa8.72□□□□□ -1.01
PTPN7-202ENST00000367279 SND1-IT1Q9HBX3 110 aa8.71□□□□□ -1.01
PTPN7-202ENST00000367279 SS18L2Q9UHA2 77 aa8.71□□□□□ -1.02
PTPN7-202ENST00000367279 NBPF19A0A087WUL8 3843 aa8.71□□□□□ -1.02
PTPN7-202ENST00000367279 NOTCH2Q04721 2471 aa8.7□□□□□ -1.02
PTPN7-202ENST00000367279 FAM218AQ96MZ4 157 aa8.7□□□□□ -1.02
PTPN7-202ENST00000367279 PLAC8L1A1L4L8 177 aa8.7□□□□□ -1.02
PTPN7-202ENST00000367279 PAX4O43316 350 aa8.69□□□□□ -1.02
PTPN7-202ENST00000367279 XCL1P47992 114 aa8.69□□□□□ -1.02
PTPN7-202ENST00000367279 TRBV6-4A0A1B0GX49 114 aa8.69□□□□□ -1.02
PTPN7-202ENST00000367279 HIVEP2P31629 2446 aa8.69□□□□□ -1.02
PTPN7-202ENST00000367279 TRBV6-8A0A0A6YYG3 113 aa8.69□□□□□ -1.02
PTPN7-202ENST00000367279 DNAL4O96015 105 aa8.68□□□□□ -1.02
PTPN7-202ENST00000367279 CMC4P56277 68 aaPredicted RBP8.68□□□□□ -1.02
PTPN7-202ENST00000367279 C6orf226Q5I0X4 101 aa8.68□□□□□ -1.02
PTPN7-202ENST00000367279 CCDC179H3BU77 68 aa8.68□□□□□ -1.02
PTPN7-202ENST00000367279 PF4P02776 101 aa8.68□□□□□ -1.02
PTPN7-202ENST00000367279 FHL2Q14192 279 aa8.68□□□□□ -1.02
PTPN7-202ENST00000367279 SHISA2Q6UWI4 295 aa8.68□□□□□ -1.02
PTPN7-202ENST00000367279 TRAV13-2A0A0B4J235 113 aa8.67□□□□□ -1.02
PTPN7-202ENST00000367279 IGLV1-51P01701 117 aa8.67□□□□□ -1.02
PTPN7-202ENST00000367279 NHLRC4P0CG21 123 aaPredicted RBP8.67□□□□□ -1.02
PTPN7-202ENST00000367279 GAGE2AQ6NT46 116 aa8.67□□□□□ -1.02
PTPN7-202ENST00000367279 LINC00337Q8N6G1 96 aa8.67□□□□□ -1.02
PTPN7-202ENST00000367279 ITPR2Q14571 2701 aa8.67□□□□□ -1.02
PTPN7-202ENST00000367279 ATP5G1P05496 136 aa8.67□□□□□ -1.02
PTPN7-202ENST00000367279 GYPEP15421 78 aa8.67□□□□□ -1.02
PTPN7-202ENST00000367279 DEFB4AO15263 64 aa8.66□□□□□ -1.02
PTPN7-202ENST00000367279 FAM19A3Q7Z5A8 133 aa8.66□□□□□ -1.02
PTPN7-202ENST00000367279 CCL18P55774 89 aa8.65□□□□□ -1.02
PTPN7-202ENST00000367279 LINC01600Q96MT4 127 aa8.65□□□□□ -1.02
PTPN7-202ENST00000367279 C3orf56Q8N813 242 aa8.65□□□□□ -1.03
PTPN7-202ENST00000367279 SMIM11BQ8TCY0 68 aa8.65□□□□□ -1.03
PTPN7-202ENST00000367279 C19orf73Q9NVV2 129 aa8.65□□□□□ -1.03
PTPN7-202ENST00000367279 CSNK1G2-AS1Q8NCQ2 148 aa8.64□□□□□ -1.03
PTPN7-202ENST00000367279 IGKV2-28A0A075B6P5 120 aa8.64□□□□□ -1.03
PTPN7-202ENST00000367279 IGKV2D-28P01615 120 aa8.64□□□□□ -1.03
PTPN7-202ENST00000367279 TRACP01848 142 aa8.64□□□□□ -1.03
PTPN7-202ENST00000367279 SMR3AQ99954 134 aa8.64□□□□□ -1.03
PTPN7-202ENST00000367279 A0A087WYN8 130 aa8.63□□□□□ -1.03
PTPN7-202ENST00000367279 OVOL2Q9BRP0 275 aa8.63□□□□□ -1.03
PTPN7-202ENST00000367279 IGLV10-54A0A075B6I4 117 aa8.63□□□□□ -1.03
PTPN7-202ENST00000367279 IGHV3OR16-9A0A0B4J2B5 98 aa8.63□□□□□ -1.03
PTPN7-202ENST00000367279 RNASE1P07998 156 aaKnown RBP8.63□□□□□ -1.03
PTPN7-202ENST00000367279 LINC00959A0A1B0GUT2 108 aa8.63□□□□□ -1.03
PTPN7-202ENST00000367279 FASNP49327 2511 aaKnown RBP8.62□□□□□ -1.03
PTPN7-202ENST00000367279 SLPIP03973 132 aa8.62□□□□□ -1.03
PTPN7-202ENST00000367279 MALP21145 153 aa8.62□□□□□ -1.03
PTPN7-202ENST00000367279 LINC00482Q8N8I6 264 aa8.62□□□□□ -1.03
PTPN7-202ENST00000367279 FAM236AA0A1B0GUQ0 79 aa8.62□□□□□ -1.03
PTPN7-202ENST00000367279 FAM236BA0A1B0GV22 79 aa8.62□□□□□ -1.03
PTPN7-202ENST00000367279 FAM240AA0A1B0GVK7 77 aa8.62□□□□□ -1.03
PTPN7-202ENST00000367279 LECT2O14960 151 aa8.62□□□□□ -1.03
PTPN7-202ENST00000367279 SS18Q15532 418 aa8.62□□□□□ -1.03
PTPN7-202ENST00000367279 DEFB121Q5J5C9 76 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms