RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 SERTAD4-AS1Q5TG53 156 aa3.95□□□□□ -1.78
CDC42BPA-204ENST00000366767 A8MZ25 164 aa3.95□□□□□ -1.78
CDC42BPA-204ENST00000366767 GAS8-AS1O95177 125 aa3.95□□□□□ -1.78
CDC42BPA-204ENST00000366767 PIEZO1Q92508 2521 aa3.95□□□□□ -1.78
CDC42BPA-204ENST00000366767 POM121L12Q8N7R1 296 aa3.94□□□□□ -1.78
CDC42BPA-204ENST00000366767 A0A087WVE0 104 aa3.94□□□□□ -1.78
CDC42BPA-204ENST00000366767 CASC2Q6XLA1 102 aa3.94□□□□□ -1.78
CDC42BPA-204ENST00000366767 ANKHD1Q8IWZ3 2542 aaKnown RBP3.94□□□□□ -1.78
CDC42BPA-204ENST00000366767 UBE2D1P51668 147 aa3.94□□□□□ -1.78
CDC42BPA-204ENST00000366767 DEFB136Q30KP8 78 aa3.94□□□□□ -1.78
CDC42BPA-204ENST00000366767 WFDC10AQ9H1F0 79 aa3.94□□□□□ -1.78
CDC42BPA-204ENST00000366767 FAM222AQ5U5X8 452 aa3.94□□□□□ -1.78
CDC42BPA-204ENST00000366767 RPS28P62857 69 aaKnown RBP3.94□□□□□ -1.78
CDC42BPA-204ENST00000366767 SPAG11BQ08648 103 aa3.94□□□□□ -1.78
CDC42BPA-204ENST00000366767 C9orf66Q5T8R8 295 aa3.94□□□□□ -1.78
CDC42BPA-204ENST00000366767 Q6ZS46 218 aa3.94□□□□□ -1.78
CDC42BPA-204ENST00000366767 A0A1W2PPR1 153 aa3.93□□□□□ -1.78
CDC42BPA-204ENST00000366767 KIF25-AS1Q9Y6Z4 181 aa3.93□□□□□ -1.78
CDC42BPA-204ENST00000366767 A0A0J9YWU9 116 aa3.93□□□□□ -1.78
CDC42BPA-204ENST00000366767 TRBV6-4A0A1B0GX49 114 aa3.93□□□□□ -1.78
CDC42BPA-204ENST00000366767 GYPEP15421 78 aa3.93□□□□□ -1.78
CDC42BPA-204ENST00000366767 TRBV7-7A0A0K0K1E9 115 aa3.93□□□□□ -1.78
CDC42BPA-204ENST00000366767 UBE2D3P61077 147 aa3.93□□□□□ -1.78
CDC42BPA-204ENST00000366767 UBE2D2P62837 147 aa3.93□□□□□ -1.78
CDC42BPA-204ENST00000366767 UBE2D4Q9Y2X8 147 aa3.93□□□□□ -1.78
CDC42BPA-204ENST00000366767 MUC6Q6W4X9 2439 aa3.92□□□□□ -1.78
CDC42BPA-204ENST00000366767 IGLV4-69A0A075B6H9 119 aa3.92□□□□□ -1.78
CDC42BPA-204ENST00000366767 J3QKU1 62 aa3.92□□□□□ -1.78
CDC42BPA-204ENST00000366767 SMIM11BQ8TCY0 68 aa3.92□□□□□ -1.78
CDC42BPA-204ENST00000366767 CDKN2A-AS1Q9UH64 79 aa3.92□□□□□ -1.78
CDC42BPA-204ENST00000366767 IBA57-AS1B1ANH7 110 aa3.91□□□□□ -1.78
CDC42BPA-204ENST00000366767 C3orf84H3BNL1 204 aa3.91□□□□□ -1.78
CDC42BPA-204ENST00000366767 NANOS2P60321 138 aaKnown RBP3.91□□□□□ -1.78
CDC42BPA-204ENST00000366767 CRYGAP11844 174 aa3.91□□□□□ -1.78
CDC42BPA-204ENST00000366767 PRRC2CQ9Y520 2896 aaKnown RBP3.91□□□□□ -1.78
CDC42BPA-204ENST00000366767 AMELXQ99217 191 aa3.91□□□□□ -1.78
CDC42BPA-204ENST00000366767 DNAJC9-AS1A6NH13 148 aa3.91□□□□□ -1.78
CDC42BPA-204ENST00000366767 LINC00315P59091 139 aa3.9□□□□□ -1.78
CDC42BPA-204ENST00000366767 KIR2DL5BQ8NHK3 375 aa3.9□□□□□ -1.78
CDC42BPA-204ENST00000366767 LAMA2P24043 3122 aaKnown RBP3.9□□□□□ -1.78
CDC42BPA-204ENST00000366767 AVPP01185 164 aa3.9□□□□□ -1.78
CDC42BPA-204ENST00000366767 Q6ZSV7 163 aa3.9□□□□□ -1.78
CDC42BPA-204ENST00000366767 PRO0255Q9UI72 69 aa3.9□□□□□ -1.78
CDC42BPA-204ENST00000366767 Q8N2B8 174 aa3.9□□□□□ -1.78
CDC42BPA-204ENST00000366767 WFDC13Q8IUB5 93 aa3.9□□□□□ -1.79
CDC42BPA-204ENST00000366767 PIEZO2Q9H5I5 2752 aa3.9□□□□□ -1.79
CDC42BPA-204ENST00000366767 PLAC8L1A1L4L8 177 aa3.9□□□□□ -1.79
CDC42BPA-204ENST00000366767 Q8N9L7 120 aa3.9□□□□□ -1.79
CDC42BPA-204ENST00000366767 BEAN1Q3B7T3 259 aa3.9□□□□□ -1.79
CDC42BPA-204ENST00000366767 C6orf99Q4VX62 202 aa3.9□□□□□ -1.79
CDC42BPA-204ENST00000366767 ESRGQ1W209 222 aa3.9□□□□□ -1.79
CDC42BPA-204ENST00000366767 XIRP2A4UGR9 3374 aa3.89□□□□□ -1.79
CDC42BPA-204ENST00000366767 CELA1Q9UNI1 258 aa3.89□□□□□ -1.79
CDC42BPA-204ENST00000366767 CXCL6P80162 114 aa3.89□□□□□ -1.79
CDC42BPA-204ENST00000366767 C10orf99Q6UWK7 81 aa3.89□□□□□ -1.79
CDC42BPA-204ENST00000366767 C1orf158Q8N1D5 194 aa3.89□□□□□ -1.79
CDC42BPA-204ENST00000366767 MUC7Q8TAX7 377 aa3.89□□□□□ -1.79
CDC42BPA-204ENST00000366767 SPART-AS1P0CW21 52 aa3.88□□□□□ -1.79
CDC42BPA-204ENST00000366767 Q6ZTI0 123 aa3.88□□□□□ -1.79
CDC42BPA-204ENST00000366767 CHCHD7Q9BUK0 85 aa3.88□□□□□ -1.79
CDC42BPA-204ENST00000366767 C16orf95Q9H693 158 aa3.88□□□□□ -1.79
CDC42BPA-204ENST00000366767 LRRK2Q5S007 2527 aa3.88□□□□□ -1.79
CDC42BPA-204ENST00000366767 TRBV6-8A0A0A6YYG3 113 aa3.88□□□□□ -1.79
CDC42BPA-204ENST00000366767 B9D2Q9BPU9 175 aa3.88□□□□□ -1.79
CDC42BPA-204ENST00000366767 CDC42SE2Q9NRR3 84 aa3.88□□□□□ -1.79
CDC42BPA-204ENST00000366767 PROK1P58294 105 aa3.87□□□□□ -1.79
CDC42BPA-204ENST00000366767 ZNF843Q8N446 348 aa3.87□□□□□ -1.79
CDC42BPA-204ENST00000366767 C2CD3Q4AC94 2353 aa3.87□□□□□ -1.79
CDC42BPA-204ENST00000366767 CHD7Q9P2D1 2997 aa3.87□□□□□ -1.79
CDC42BPA-204ENST00000366767 HIVEP3Q5T1R4 2406 aa3.87□□□□□ -1.79
CDC42BPA-204ENST00000366767 TTC28Q96AY4 2481 aa3.87□□□□□ -1.79
CDC42BPA-204ENST00000366767 F8WDY8 70 aa3.87□□□□□ -1.79
CDC42BPA-204ENST00000366767 Q6ZQY7 126 aa3.87□□□□□ -1.79
CDC42BPA-204ENST00000366767 TMEM254Q8TBM7 123 aa3.87□□□□□ -1.79
CDC42BPA-204ENST00000366767 A0A087WYN8 130 aa3.87□□□□□ -1.79
CDC42BPA-204ENST00000366767 HILS1P60008 231 aa3.87□□□□□ -1.79
CDC42BPA-204ENST00000366767 BRCA2P51587 3418 aa3.87□□□□□ -1.79
CDC42BPA-204ENST00000366767 Q8N3U1 123 aa3.87□□□□□ -1.79
CDC42BPA-204ENST00000366767 EDN2P20800 178 aa3.86□□□□□ -1.79
CDC42BPA-204ENST00000366767 LINC01561Q8N1V8 128 aa3.86□□□□□ -1.79
CDC42BPA-204ENST00000366767 LIMD2Q9BT23 127 aa3.86□□□□□ -1.79
CDC42BPA-204ENST00000366767 NTM-AS1Q6ZSK4 140 aa3.86□□□□□ -1.79
CDC42BPA-204ENST00000366767 LINC00269Q8N2A0 174 aa3.86□□□□□ -1.79
CDC42BPA-204ENST00000366767 BDP1A6H8Y1 2624 aa3.86□□□□□ -1.79
CDC42BPA-204ENST00000366767 TSPEAR-AS2P59090 65 aa3.86□□□□□ -1.79
CDC42BPA-204ENST00000366767 RPL28P46779 137 aaKnown RBP3.86□□□□□ -1.79
CDC42BPA-204ENST00000366767 FAM19A1Q7Z5A9 133 aa3.86□□□□□ -1.79
CDC42BPA-204ENST00000366767 LINC00208Q96KT6 92 aa3.86□□□□□ -1.79
CDC42BPA-204ENST00000366767 ACANP16112 2415 aa3.86□□□□□ -1.79
CDC42BPA-204ENST00000366767 FLG2Q5D862 2391 aaPredicted RBP3.86□□□□□ -1.79
CDC42BPA-204ENST00000366767 ODF3L2Q3SX64 289 aa3.86□□□□□ -1.79
CDC42BPA-204ENST00000366767 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.85□□□□□ -1.79
CDC42BPA-204ENST00000366767 A8MTW9 85 aa3.85□□□□□ -1.79
CDC42BPA-204ENST00000366767 LINC00242Q5T6M2 205 aa3.85□□□□□ -1.79
CDC42BPA-204ENST00000366767 Q8N814 137 aa3.85□□□□□ -1.79
CDC42BPA-204ENST00000366767 CHCHD10Q8WYQ3 142 aaPredicted RBP3.85□□□□□ -1.79
CDC42BPA-204ENST00000366767 KLK12Q9UKR0 248 aa3.85□□□□□ -1.79
CDC42BPA-204ENST00000366767 SBSPONQ8IVN8 264 aa3.85□□□□□ -1.79
CDC42BPA-204ENST00000366767 LINC01006Q8NI28 216 aa3.85□□□□□ -1.79
CDC42BPA-204ENST00000366767 REG3AQ06141 175 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms