RNA–Protein interactions for RNA: ENST00000363574.1

RNU6-1339P-201, Transcript of RNA, U6 small nuclear 1339, pseudogene, humanhuman

BASIC

Gene RNU6-1339P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1339P-201ENST00000363574 COL4A6Q14031 1691 aa0.43□□□□□ -2.34
RNU6-1339P-201ENST00000363574 MRC2Q9UBG0 1479 aa0.43□□□□□ -2.34
RNU6-1339P-201ENST00000363574 MPC2O95563 127 aa0.43□□□□□ -2.34
RNU6-1339P-201ENST00000363574 UBA52P62987 128 aaKnown RBP0.43□□□□□ -2.34
RNU6-1339P-201ENST00000363574 C10orf113Q5VZT2 155 aa0.43□□□□□ -2.34
RNU6-1339P-201ENST00000363574 SAA2P0DJI9 122 aaPredicted RBP0.42□□□□□ -2.34
RNU6-1339P-201ENST00000363574 NCMAPQ5T1S8 102 aa0.42□□□□□ -2.34
RNU6-1339P-201ENST00000363574 Q8IZM0 81 aa0.42□□□□□ -2.34
RNU6-1339P-201ENST00000363574 F8P00451 2351 aa0.42□□□□□ -2.34
RNU6-1339P-201ENST00000363574 AHNAK2Q8IVF2 5795 aa0.41□□□□□ -2.34
RNU6-1339P-201ENST00000363574 A0A1B0GWA3 101 aa0.41□□□□□ -2.34
RNU6-1339P-201ENST00000363574 PRDM15P57071 1507 aaPredicted RBP0.4□□□□□ -2.35
RNU6-1339P-201ENST00000363574 ARHGEF12Q9NZN5 1544 aa0.4□□□□□ -2.35
RNU6-1339P-201ENST00000363574 MACF1Q9UPN3 7388 aaKnown RBP0.4□□□□□ -2.35
RNU6-1339P-201ENST00000363574 NAV2Q8IVL1 2488 aa0.4□□□□□ -2.35
RNU6-1339P-201ENST00000363574 M0R143 59 aa0.39□□□□□ -2.35
RNU6-1339P-201ENST00000363574 PMCHL2Q9BQD1 86 aa0.39□□□□□ -2.35
RNU6-1339P-201ENST00000363574 SYNE2Q8WXH0 6885 aaKnown RBP0.39□□□□□ -2.35
RNU6-1339P-201ENST00000363574 SYNE1Q8NF91 8797 aaKnown RBP0.39□□□□□ -2.35
RNU6-1339P-201ENST00000363574 FSIP2Q5CZC0 6907 aa0.38□□□□□ -2.35
RNU6-1339P-201ENST00000363574 MAGI1Q96QZ7 1491 aaPredicted RBP0.38□□□□□ -2.35
RNU6-1339P-201ENST00000363574 ANKRD36BQ8N2N9 1353 aa0.38□□□□□ -2.35
RNU6-1339P-201ENST00000363574 NDUFC1O43677 76 aa0.38□□□□□ -2.35
RNU6-1339P-201ENST00000363574 CACFD1Q9UGQ2 172 aa0.38□□□□□ -2.35
RNU6-1339P-201ENST00000363574 AP4S1Q9Y587 144 aa0.38□□□□□ -2.35
RNU6-1339P-201ENST00000363574 FAT4Q6V0I7 4981 aa0.38□□□□□ -2.35
RNU6-1339P-201ENST00000363574 PAPPAQ13219 1627 aa0.38□□□□□ -2.35
RNU6-1339P-201ENST00000363574 NHSL1Q5SYE7 1610 aa0.38□□□□□ -2.35
RNU6-1339P-201ENST00000363574 VPS8Q8N3P4 1428 aa0.38□□□□□ -2.35
RNU6-1339P-201ENST00000363574 GAPVD1Q14C86 1478 aa0.37□□□□□ -2.35
RNU6-1339P-201ENST00000363574 TEX14Q8IWB6 1497 aa0.37□□□□□ -2.35
RNU6-1339P-201ENST00000363574 A0A0G2JND7 137 aa0.37□□□□□ -2.35
RNU6-1339P-201ENST00000363574 TRBV6-1A0A0K0K1D8 114 aa0.37□□□□□ -2.35
RNU6-1339P-201ENST00000363574 LINC01600Q96MT4 127 aa0.37□□□□□ -2.35
RNU6-1339P-201ENST00000363574 C1orf167Q5SNV9 1468 aa0.36□□□□□ -2.35
RNU6-1339P-201ENST00000363574 MLH3Q9UHC1 1453 aa0.36□□□□□ -2.35
RNU6-1339P-201ENST00000363574 LINC00032P0C843 101 aa0.36□□□□□ -2.35
RNU6-1339P-201ENST00000363574 WFDC2Q14508 124 aa0.36□□□□□ -2.35
RNU6-1339P-201ENST00000363574 PIGYQ3MUY2 71 aa0.36□□□□□ -2.35
RNU6-1339P-201ENST00000363574 LCN9Q8WX39 176 aa0.36□□□□□ -2.35
RNU6-1339P-201ENST00000363574 DPY30Q9C005 99 aa0.36□□□□□ -2.35
RNU6-1339P-201ENST00000363574 PRO1933Q9H354 126 aa0.36□□□□□ -2.35
RNU6-1339P-201ENST00000363574 LINC00846Q9NV44 126 aa0.36□□□□□ -2.35
RNU6-1339P-201ENST00000363574 POLA1P09884 1462 aaPredicted RBP0.35□□□□□ -2.35
RNU6-1339P-201ENST00000363574 FYCO1Q9BQS8 1478 aa0.35□□□□□ -2.35
RNU6-1339P-201ENST00000363574 ANK2Q01484 3957 aa0.35□□□□□ -2.35
RNU6-1339P-201ENST00000363574 CFDP00746 253 aaPredicted RBP0.35□□□□□ -2.35
RNU6-1339P-201ENST00000363574 FDCSPQ8NFU4 85 aa0.35□□□□□ -2.35
RNU6-1339P-201ENST00000363574 U3KQA8 63 aa0.35□□□□□ -2.35
RNU6-1339P-201ENST00000363574 MYO7BQ6PIF6 2116 aa0.35□□□□□ -2.35
RNU6-1339P-201ENST00000363574 NUP188Q5SRE5 1749 aa0.35□□□□□ -2.35
RNU6-1339P-201ENST00000363574 ABCC10Q5T3U5 1492 aa0.35□□□□□ -2.35
RNU6-1339P-201ENST00000363574 TRBV25-1A0A075B6N4 114 aa0.34□□□□□ -2.36
RNU6-1339P-201ENST00000363574 H7BZZ5 65 aa0.34□□□□□ -2.36
RNU6-1339P-201ENST00000363574 ATOX1O00244 68 aa0.34□□□□□ -2.36
RNU6-1339P-201ENST00000363574 S100A8P05109 93 aa0.34□□□□□ -2.36
RNU6-1339P-201ENST00000363574 ZFYVE26Q68DK2 2539 aa0.34□□□□□ -2.36
RNU6-1339P-201ENST00000363574 AHCTF1Q8WYP5 2266 aa0.34□□□□□ -2.36
RNU6-1339P-201ENST00000363574 TULP4Q9NRJ4 1543 aa0.33□□□□□ -2.36
RNU6-1339P-201ENST00000363574 FXYD6-FXYD2A0A087WZ82 144 aa0.33□□□□□ -2.36
RNU6-1339P-201ENST00000363574 ASIPP42127 132 aa0.33□□□□□ -2.36
RNU6-1339P-201ENST00000363574 TRGV9Q99603 122 aa0.33□□□□□ -2.36
RNU6-1339P-201ENST00000363574 SPTBN2O15020 2390 aa0.33□□□□□ -2.36
RNU6-1339P-201ENST00000363574 OTOGQ6ZRI0 2925 aa0.33□□□□□ -2.36
RNU6-1339P-201ENST00000363574 A0A087WVE0 104 aa0.32□□□□□ -2.36
RNU6-1339P-201ENST00000363574 LINC00959A0A1B0GUT2 108 aa0.32□□□□□ -2.36
RNU6-1339P-201ENST00000363574 C7orf77A4D0Y5 90 aa0.32□□□□□ -2.36
RNU6-1339P-201ENST00000363574 PMCHL1Q16048 86 aa0.32□□□□□ -2.36
RNU6-1339P-201ENST00000363574 Q5VSD8 79 aa0.32□□□□□ -2.36
RNU6-1339P-201ENST00000363574 SERP2Q8N6R1 65 aa0.32□□□□□ -2.36
RNU6-1339P-201ENST00000363574 PDCD11Q14690 1871 aaKnown RBP0.32□□□□□ -2.36
RNU6-1339P-201ENST00000363574 CHD9Q3L8U1 2897 aa0.32□□□□□ -2.36
RNU6-1339P-201ENST00000363574 PTPRZ1P23471 2315 aaPredicted RBP0.32□□□□□ -2.36
RNU6-1339P-201ENST00000363574 C2CD3Q4AC94 2353 aa0.32□□□□□ -2.36
RNU6-1339P-201ENST00000363574 IGF2RP11717 2491 aa0.31□□□□□ -2.36
RNU6-1339P-201ENST00000363574 TRBV7-4A0A0J9YYF1 115 aa0.31□□□□□ -2.36
RNU6-1339P-201ENST00000363574 DEFB123Q8N688 67 aa0.31□□□□□ -2.36
RNU6-1339P-201ENST00000363574 VAMP8Q9BV40 100 aa0.31□□□□□ -2.36
RNU6-1339P-201ENST00000363574 PLCE1Q9P212 2302 aa0.3□□□□□ -2.36
RNU6-1339P-201ENST00000363574 ZFHX3Q15911 3703 aa0.3□□□□□ -2.36
RNU6-1339P-201ENST00000363574 PKIAP61925 76 aa0.3□□□□□ -2.36
RNU6-1339P-201ENST00000363574 PSMG4Q5JS54 123 aa0.3□□□□□ -2.36
RNU6-1339P-201ENST00000363574 COL5A1-AS1Q5SY13 56 aa0.3□□□□□ -2.36
RNU6-1339P-201ENST00000363574 SNHG12Q9BXW3 62 aa0.3□□□□□ -2.36
RNU6-1339P-201ENST00000363574 PPRC1Q5VV67 1664 aaKnown RBP0.3□□□□□ -2.36
RNU6-1339P-201ENST00000363574 KMT2DO14686 5537 aa0.3□□□□□ -2.36
RNU6-1339P-201ENST00000363574 NLRP1Q9C000 1473 aa0.29□□□□□ -2.36
RNU6-1339P-201ENST00000363574 LRP1Q07954 4544 aaKnown RBP0.29□□□□□ -2.36
RNU6-1339P-201ENST00000363574 SPRR1AP35321 89 aa0.29□□□□□ -2.36
RNU6-1339P-201ENST00000363574 DEFB109BQ30KR1 87 aa0.29□□□□□ -2.36
RNU6-1339P-201ENST00000363574 CCNB3Q8WWL7 1395 aa0.29□□□□□ -2.36
RNU6-1339P-201ENST00000363574 PLEKHH2Q8IVE3 1493 aa0.29□□□□□ -2.36
RNU6-1339P-201ENST00000363574 XRN1Q8IZH2 1706 aaKnown RBP0.28□□□□□ -2.36
RNU6-1339P-201ENST00000363574 UQCRHP07919 91 aa0.28□□□□□ -2.36
RNU6-1339P-201ENST00000363574 ZNF292O60281 2723 aa0.27□□□□□ -2.37
RNU6-1339P-201ENST00000363574 SYS1-DBNDD2H3BUS1 97 aa0.27□□□□□ -2.37
RNU6-1339P-201ENST00000363574 NRXN1Q9ULB1 1477 aa0.27□□□□□ -2.37
RNU6-1339P-201ENST00000363574 USF3Q68DE3 2245 aa0.26□□□□□ -2.37
RNU6-1339P-201ENST00000363574 TRBV7-7A0A0K0K1E9 115 aa0.26□□□□□ -2.37
RNU6-1339P-201ENST00000363574 FAUP35544 74 aaKnown RBP0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms