RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 AAMDCQ9H7C9 122 aa3.62□□□□□ -1.83
CDC42SE2-201ENST00000360515 IL36BQ9NZH7 164 aa3.62□□□□□ -1.83
CDC42SE2-201ENST00000360515 FABP5P3A8MUU1 101 aa3.62□□□□□ -1.83
CDC42SE2-201ENST00000360515 F8W1H4 67 aa3.62□□□□□ -1.83
CDC42SE2-201ENST00000360515 MT-ND6P03923 174 aa3.62□□□□□ -1.83
CDC42SE2-201ENST00000360515 ARL16Q0P5N6 197 aa3.62□□□□□ -1.83
CDC42SE2-201ENST00000360515 ETDBQ3ZM63 59 aa3.62□□□□□ -1.83
CDC42SE2-201ENST00000360515 C20orf78Q9BR46 151 aa3.62□□□□□ -1.83
CDC42SE2-201ENST00000360515 CDIP1Q9H305 208 aa3.62□□□□□ -1.83
CDC42SE2-201ENST00000360515 PSENENQ9NZ42 101 aa3.62□□□□□ -1.83
CDC42SE2-201ENST00000360515 HSBP1O75506 76 aa3.61□□□□□ -1.83
CDC42SE2-201ENST00000360515 TRBV6-8A0A0A6YYG3 113 aa3.61□□□□□ -1.83
CDC42SE2-201ENST00000360515 PAGE4O60829 102 aa3.61□□□□□ -1.83
CDC42SE2-201ENST00000360515 Q6ZUT4 128 aa3.61□□□□□ -1.83
CDC42SE2-201ENST00000360515 PMCHL2Q9BQD1 86 aa3.61□□□□□ -1.83
CDC42SE2-201ENST00000360515 OTORQ9NRC9 128 aa3.61□□□□□ -1.83
CDC42SE2-201ENST00000360515 CCDC179H3BU77 68 aa3.61□□□□□ -1.83
CDC42SE2-201ENST00000360515 M0R3E3 92 aa3.61□□□□□ -1.83
CDC42SE2-201ENST00000360515 HMGB3O15347 200 aaKnown RBP3.61□□□□□ -1.83
CDC42SE2-201ENST00000360515 IAPPP10997 89 aa3.61□□□□□ -1.83
CDC42SE2-201ENST00000360515 RPL13AP40429 203 aaKnown RBP3.61□□□□□ -1.83
CDC42SE2-201ENST00000360515 TMEM136Q6ZRR5 245 aa3.61□□□□□ -1.83
CDC42SE2-201ENST00000360515 COX8AP10176 69 aa3.6□□□□□ -1.83
CDC42SE2-201ENST00000360515 IGKV2D-24A0A075B6R9 120 aa3.6□□□□□ -1.83
CDC42SE2-201ENST00000360515 A0A1W2PRE2 83 aa3.6□□□□□ -1.83
CDC42SE2-201ENST00000360515 KRTAP9-7A8MTY7 169 aa3.6□□□□□ -1.83
CDC42SE2-201ENST00000360515 C15orf56Q8N910 161 aa3.6□□□□□ -1.83
CDC42SE2-201ENST00000360515 TMEM191AQ9H0A3 160 aa3.6□□□□□ -1.83
CDC42SE2-201ENST00000360515 CTXND1A0A1B0GTU2 59 aa3.59□□□□□ -1.83
CDC42SE2-201ENST00000360515 PGPA6NDG6 321 aa3.59□□□□□ -1.83
CDC42SE2-201ENST00000360515 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.59□□□□□ -1.83
CDC42SE2-201ENST00000360515 F8WDY8 70 aa3.59□□□□□ -1.83
CDC42SE2-201ENST00000360515 SYS1-DBNDD2H3BUS1 97 aa3.59□□□□□ -1.83
CDC42SE2-201ENST00000360515 LECT2O14960 151 aa3.59□□□□□ -1.83
CDC42SE2-201ENST00000360515 SLC38A11Q08AI6 406 aa3.59□□□□□ -1.83
CDC42SE2-201ENST00000360515 NHLRC2Q8NBF2 726 aa3.59□□□□□ -1.83
CDC42SE2-201ENST00000360515 LINC00526Q96FQ7 95 aa3.59□□□□□ -1.83
CDC42SE2-201ENST00000360515 TRBV20OR9-2A0A075B6H5 130 aa3.59□□□□□ -1.83
CDC42SE2-201ENST00000360515 IGKV2-40A0A087WW87 121 aaPredicted RBP3.59□□□□□ -1.83
CDC42SE2-201ENST00000360515 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.59□□□□□ -1.83
CDC42SE2-201ENST00000360515 IGKV2D-40P01614 121 aaPredicted RBP3.59□□□□□ -1.83
CDC42SE2-201ENST00000360515 SPANXN5Q5MJ07 72 aa3.59□□□□□ -1.83
CDC42SE2-201ENST00000360515 OCC1Q8TAD7 63 aa3.59□□□□□ -1.83
CDC42SE2-201ENST00000360515 SPANXA1Q9NS26 97 aa3.59□□□□□ -1.83
CDC42SE2-201ENST00000360515 KCNIP2Q9NS61 270 aa3.59□□□□□ -1.83
CDC42SE2-201ENST00000360515 C11orf21Q9P2W6 132 aa3.59□□□□□ -1.83
CDC42SE2-201ENST00000360515 TIMM9Q9Y5J7 89 aa3.59□□□□□ -1.83
CDC42SE2-201ENST00000360515 H3BP45 60 aa3.59□□□□□ -1.84
CDC42SE2-201ENST00000360515 HLA-DQA1P01909 254 aa3.59□□□□□ -1.84
CDC42SE2-201ENST00000360515 KRTAP19-2Q3LHN2 52 aa3.59□□□□□ -1.84
CDC42SE2-201ENST00000360515 H0Y9J4 135 aa3.58□□□□□ -1.84
CDC42SE2-201ENST00000360515 ZNF876PQ49A33 203 aa3.58□□□□□ -1.84
CDC42SE2-201ENST00000360515 FAM162BQ5T6X4 162 aa3.58□□□□□ -1.84
CDC42SE2-201ENST00000360515 PGLYRP4Q96LB8 373 aa3.58□□□□□ -1.84
CDC42SE2-201ENST00000360515 GNRH2O43555 120 aa3.58□□□□□ -1.84
CDC42SE2-201ENST00000360515 APCSP02743 223 aa3.58□□□□□ -1.84
CDC42SE2-201ENST00000360515 CFC1BP0CG36 223 aa3.58□□□□□ -1.84
CDC42SE2-201ENST00000360515 SMIM13P0DJ93 91 aa3.58□□□□□ -1.84
CDC42SE2-201ENST00000360515 FOXI1Q12951 378 aa3.58□□□□□ -1.84
CDC42SE2-201ENST00000360515 RNASEKQ6P5S7 137 aaKnown RBP3.58□□□□□ -1.84
CDC42SE2-201ENST00000360515 GTSF1Q8WW33 167 aa3.58□□□□□ -1.84
CDC42SE2-201ENST00000360515 DNAJC30Q96LL9 226 aa3.58□□□□□ -1.84
CDC42SE2-201ENST00000360515 KLK12Q9UKR0 248 aa3.58□□□□□ -1.84
CDC42SE2-201ENST00000360515 TRBV7-3A0A075B6L6 115 aa3.58□□□□□ -1.84
CDC42SE2-201ENST00000360515 ASB16-AS1Q495Z4 193 aa3.58□□□□□ -1.84
CDC42SE2-201ENST00000360515 EXOC3-AS1Q8N2X6 119 aa3.58□□□□□ -1.84
CDC42SE2-201ENST00000360515 TMEM75Q8N9X5 138 aa3.58□□□□□ -1.84
CDC42SE2-201ENST00000360515 DPH3P1Q9H4G8 78 aa3.58□□□□□ -1.84
CDC42SE2-201ENST00000360515 CXorf1O96002 111 aa3.57□□□□□ -1.84
CDC42SE2-201ENST00000360515 FGF6P10767 208 aa3.57□□□□□ -1.84
CDC42SE2-201ENST00000360515 NDUFV3P56181 108 aaKnown RBP3.57□□□□□ -1.84
CDC42SE2-201ENST00000360515 K7EN84 100 aa3.57□□□□□ -1.84
CDC42SE2-201ENST00000360515 APOMO95445 188 aa3.57□□□□□ -1.84
CDC42SE2-201ENST00000360515 GAGE13Q4V321 117 aa3.57□□□□□ -1.84
CDC42SE2-201ENST00000360515 LINC00173Q6ZV60 143 aa3.57□□□□□ -1.84
CDC42SE2-201ENST00000360515 C14orf178Q8N769 122 aaPredicted RBP3.57□□□□□ -1.84
CDC42SE2-201ENST00000360515 PRELID3AQ96N28 172 aa3.57□□□□□ -1.84
CDC42SE2-201ENST00000360515 TMEM126AQ9H061 195 aa3.57□□□□□ -1.84
CDC42SE2-201ENST00000360515 V9GYV3 84 aa3.57□□□□□ -1.84
CDC42SE2-201ENST00000360515 TRBV20-1A0A075B6N2 111 aa3.57□□□□□ -1.84
CDC42SE2-201ENST00000360515 H3BMG7 143 aa3.57□□□□□ -1.84
CDC42SE2-201ENST00000360515 PRO0461Q9UI25 63 aa3.57□□□□□ -1.84
CDC42SE2-201ENST00000360515 TRAV26-2A0A0B4J265 109 aa3.56□□□□□ -1.84
CDC42SE2-201ENST00000360515 A0A1B0GWB2 263 aa3.56□□□□□ -1.84
CDC42SE2-201ENST00000360515 H7C423 109 aa3.56□□□□□ -1.84
CDC42SE2-201ENST00000360515 LEPROTL1O95214 131 aa3.56□□□□□ -1.84
CDC42SE2-201ENST00000360515 CSN1S1P47710 185 aa3.56□□□□□ -1.84
CDC42SE2-201ENST00000360515 HBG1P69891 147 aa3.56□□□□□ -1.84
CDC42SE2-201ENST00000360515 HBG2P69892 147 aa3.56□□□□□ -1.84
CDC42SE2-201ENST00000360515 C4orf48Q5BLP8 95 aa3.56□□□□□ -1.84
CDC42SE2-201ENST00000360515 MEIG1Q5JSS6 88 aa3.56□□□□□ -1.84
CDC42SE2-201ENST00000360515 DIRC1Q969H9 104 aa3.56□□□□□ -1.84
CDC42SE2-201ENST00000360515 UBE2WQ96B02 151 aa3.56□□□□□ -1.84
CDC42SE2-201ENST00000360515 NPCDR1Q9BY65 106 aa3.56□□□□□ -1.84
CDC42SE2-201ENST00000360515 MAP1LC3AQ9H492 121 aa3.56□□□□□ -1.84
CDC42SE2-201ENST00000360515 UBE2L5PA0A1B0GUS4 154 aa3.56□□□□□ -1.84
CDC42SE2-201ENST00000360515 H7C1H1 209 aa3.56□□□□□ -1.84
CDC42SE2-201ENST00000360515 MIC13Q5XKP0 118 aa3.56□□□□□ -1.84
CDC42SE2-201ENST00000360515 URB1-AS1Q96HZ7 61 aa3.56□□□□□ -1.84
CDC42SE2-201ENST00000360515 MAP1LC3CQ9BXW4 147 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms