RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 LRRC75A-AS1Q8N1F1 130 aa7.06□□□□□ -1.28
TRAPPC2-201ENST00000359680 LOC107984640A0A0U1RRK4 108 aa7.06□□□□□ -1.28
TRAPPC2-201ENST00000359680 RPL18AQ02543 176 aaKnown RBP7.06□□□□□ -1.28
TRAPPC2-201ENST00000359680 STHQ8IWL8 128 aa7.06□□□□□ -1.28
TRAPPC2-201ENST00000359680 CELSR2Q9HCU4 2923 aa7.05□□□□□ -1.28
TRAPPC2-201ENST00000359680 IGKV3D-7A0A0C4DH55 119 aa7.05□□□□□ -1.28
TRAPPC2-201ENST00000359680 A0A1B0GX51 115 aa7.05□□□□□ -1.28
TRAPPC2-201ENST00000359680 Q6ZTI0 123 aa7.05□□□□□ -1.28
TRAPPC2-201ENST00000359680 IGKV3OR2-268A0A0C4DH90 116 aa7.05□□□□□ -1.28
TRAPPC2-201ENST00000359680 hADV29S1A0JD25 119 aa7.05□□□□□ -1.28
TRAPPC2-201ENST00000359680 Q6JHZ5 121 aa7.05□□□□□ -1.28
TRAPPC2-201ENST00000359680 DSCR9P59020 149 aa7.04□□□□□ -1.28
TRAPPC2-201ENST00000359680 DEFB114Q30KQ6 69 aa7.04□□□□□ -1.28
TRAPPC2-201ENST00000359680 C9orf129Q5T035 196 aaKnown RBP7.04□□□□□ -1.28
TRAPPC2-201ENST00000359680 C1orf158Q8N1D5 194 aa7.04□□□□□ -1.28
TRAPPC2-201ENST00000359680 J3QLI3 93 aa7.04□□□□□ -1.28
TRAPPC2-201ENST00000359680 LECT2O14960 151 aa7.04□□□□□ -1.28
TRAPPC2-201ENST00000359680 IL17DQ8TAD2 202 aa7.04□□□□□ -1.28
TRAPPC2-201ENST00000359680 CCL18P55774 89 aa7.03□□□□□ -1.28
TRAPPC2-201ENST00000359680 Q6YL49 198 aa7.03□□□□□ -1.28
TRAPPC2-201ENST00000359680 OR13C6PQ8NH95 151 aa7.03□□□□□ -1.28
TRAPPC2-201ENST00000359680 LINC00846Q9NV44 126 aa7.03□□□□□ -1.28
TRAPPC2-201ENST00000359680 PAX4O43316 350 aa7.02□□□□□ -1.29
TRAPPC2-201ENST00000359680 C4orf3Q8WVX3 66 aa7.02□□□□□ -1.29
TRAPPC2-201ENST00000359680 OBSCN-AS1Q96MR7 158 aa7.02□□□□□ -1.29
TRAPPC2-201ENST00000359680 IBA57-AS1B1ANH7 110 aa7.02□□□□□ -1.29
TRAPPC2-201ENST00000359680 PFN2P35080 140 aa7.02□□□□□ -1.29
TRAPPC2-201ENST00000359680 ODF3L2Q3SX64 289 aa7.02□□□□□ -1.29
TRAPPC2-201ENST00000359680 MAPK1IP1LQ8NDC0 245 aa7.02□□□□□ -1.29
TRAPPC2-201ENST00000359680 C2CD3Q4AC94 2353 aa7.02□□□□□ -1.29
TRAPPC2-201ENST00000359680 NCOR2Q9Y618 2525 aa7.01□□□□□ -1.29
TRAPPC2-201ENST00000359680 NCR3O14931 201 aa7.01□□□□□ -1.29
TRAPPC2-201ENST00000359680 SERP2Q8N6R1 65 aa7.01□□□□□ -1.29
TRAPPC2-201ENST00000359680 NOP10Q9NPE3 64 aaKnown RBP7.01□□□□□ -1.29
TRAPPC2-201ENST00000359680 A0A087WVE0 104 aa7.01□□□□□ -1.29
TRAPPC2-201ENST00000359680 FAM19A5Q7Z5A7 132 aaPredicted RBP7.01□□□□□ -1.29
TRAPPC2-201ENST00000359680 TRGV2A0A075B6R0 118 aa7□□□□□ -1.29
TRAPPC2-201ENST00000359680 ORMDL1Q9P0S3 153 aa7□□□□□ -1.29
TRAPPC2-201ENST00000359680 SLPIP03973 132 aa7□□□□□ -1.29
TRAPPC2-201ENST00000359680 RPS28P62857 69 aaKnown RBP7□□□□□ -1.29
TRAPPC2-201ENST00000359680 USP17L23D6RBM5 183 aa6.99□□□□□ -1.29
TRAPPC2-201ENST00000359680 TMEM258P61165 79 aa6.99□□□□□ -1.29
TRAPPC2-201ENST00000359680 NOTCH3Q9UM47 2321 aa6.99□□□□□ -1.29
TRAPPC2-201ENST00000359680 LOC100131303A0A0U1RQF7 123 aa6.99□□□□□ -1.29
TRAPPC2-201ENST00000359680 CHD8Q9HCK8 2581 aa6.99□□□□□ -1.29
TRAPPC2-201ENST00000359680 IGHV3OR16-9A0A0B4J2B5 98 aa6.99□□□□□ -1.29
TRAPPC2-201ENST00000359680 C5orf47Q569G3 176 aa6.99□□□□□ -1.29
TRAPPC2-201ENST00000359680 CYSTM1Q9H1C7 97 aa6.99□□□□□ -1.29
TRAPPC2-201ENST00000359680 IGLV4-60A0A075B6I1 120 aa6.98□□□□□ -1.29
TRAPPC2-201ENST00000359680 SMIM9A6NGZ8 99 aa6.98□□□□□ -1.29
TRAPPC2-201ENST00000359680 LINC01561Q8N1V8 128 aa6.98□□□□□ -1.29
TRAPPC2-201ENST00000359680 USP9YO00507 2555 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC2-201ENST00000359680 A0A087WZ39 114 aa6.98□□□□□ -1.29
TRAPPC2-201ENST00000359680 TRAV25A0A0B4J276 109 aa6.98□□□□□ -1.29
TRAPPC2-201ENST00000359680 TRGV4A0A0C4DH28 118 aa6.98□□□□□ -1.29
TRAPPC2-201ENST00000359680 TRBV6-4A0A1B0GX49 114 aa6.98□□□□□ -1.29
TRAPPC2-201ENST00000359680 S100A7L2Q5SY68 101 aa6.98□□□□□ -1.29
TRAPPC2-201ENST00000359680 C11orf68Q9H3H3 251 aaKnown RBP6.98□□□□□ -1.29
TRAPPC2-201ENST00000359680 CCKP06307 115 aa6.97□□□□□ -1.29
TRAPPC2-201ENST00000359680 C6orf226Q5I0X4 101 aa6.97□□□□□ -1.29
TRAPPC2-201ENST00000359680 WNK1Q9H4A3 2382 aa6.97□□□□□ -1.29
TRAPPC2-201ENST00000359680 ZANQ9Y493 2812 aa6.97□□□□□ -1.29
TRAPPC2-201ENST00000359680 MYO9AB2RTY4 2548 aa6.96□□□□□ -1.29
TRAPPC2-201ENST00000359680 J3QL48 77 aa6.96□□□□□ -1.29
TRAPPC2-201ENST00000359680 FSHBP01225 129 aa6.96□□□□□ -1.29
TRAPPC2-201ENST00000359680 C16orf74Q96GX8 76 aa6.96□□□□□ -1.29
TRAPPC2-201ENST00000359680 SPTBN4Q9H254 2564 aa6.96□□□□□ -1.3
TRAPPC2-201ENST00000359680 MXRA5Q9NR99 2828 aa6.96□□□□□ -1.3
TRAPPC2-201ENST00000359680 CSMD2Q7Z408 3487 aa6.96□□□□□ -1.3
TRAPPC2-201ENST00000359680 A0A096LNT2 108 aa6.96□□□□□ -1.3
TRAPPC2-201ENST00000359680 TRBV6-8A0A0A6YYG3 113 aa6.96□□□□□ -1.3
TRAPPC2-201ENST00000359680 LY6G6DO95868 133 aa6.96□□□□□ -1.3
TRAPPC2-201ENST00000359680 TMEM86BQ8N661 226 aa6.96□□□□□ -1.3
TRAPPC2-201ENST00000359680 UPK3BQ9BT76 320 aa6.96□□□□□ -1.3
TRAPPC2-201ENST00000359680 ANKRD17O75179 2603 aaKnown RBP6.95□□□□□ -1.3
TRAPPC2-201ENST00000359680 JMJD7-PLA2G4BH0Y9G9 81 aa6.95□□□□□ -1.3
TRAPPC2-201ENST00000359680 KIR2DL5BQ8NHK3 375 aa6.95□□□□□ -1.3
TRAPPC2-201ENST00000359680 DPH3Q96FX2 82 aa6.95□□□□□ -1.3
TRAPPC2-201ENST00000359680 ITPR1Q14643 2758 aa6.95□□□□□ -1.3
TRAPPC2-201ENST00000359680 SS18Q15532 418 aa6.94□□□□□ -1.3
TRAPPC2-201ENST00000359680 ATP5EP2Q5VTU8 51 aa6.94□□□□□ -1.3
TRAPPC2-201ENST00000359680 LINC00959A0A1B0GUT2 108 aa6.93□□□□□ -1.3
TRAPPC2-201ENST00000359680 A0A1W2PRX2 142 aa6.93□□□□□ -1.3
TRAPPC2-201ENST00000359680 DSCR8Q96T75 97 aa6.93□□□□□ -1.3
TRAPPC2-201ENST00000359680 TMEM256-PLSCR3K7ERE1 68 aa6.93□□□□□ -1.3
TRAPPC2-201ENST00000359680 DOPEY1Q5JWR5 2465 aa6.93□□□□□ -1.3
TRAPPC2-201ENST00000359680 USP9XQ93008 2570 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC2-201ENST00000359680 CHD6Q8TD26 2715 aa6.93□□□□□ -1.3
TRAPPC2-201ENST00000359680 PLAC8L1A1L4L8 177 aa6.92□□□□□ -1.3
TRAPPC2-201ENST00000359680 GHRHP01286 108 aa6.92□□□□□ -1.3
TRAPPC2-201ENST00000359680 IGHV4-31P0DP07 118 aa6.92□□□□□ -1.3
TRAPPC2-201ENST00000359680 XCL1P47992 114 aa6.92□□□□□ -1.3
TRAPPC2-201ENST00000359680 Q8N814 137 aa6.92□□□□□ -1.3
TRAPPC2-201ENST00000359680 HILS1P60008 231 aa6.92□□□□□ -1.3
TRAPPC2-201ENST00000359680 C11orf44Q8N8P7 122 aa6.92□□□□□ -1.3
TRAPPC2-201ENST00000359680 LINC00167Q96N53 147 aa6.92□□□□□ -1.3
TRAPPC2-201ENST00000359680 TRAV23DV6A0A075B6W5 121 aa6.92□□□□□ -1.3
TRAPPC2-201ENST00000359680 RPL35AP18077 110 aaKnown RBP6.92□□□□□ -1.3
TRAPPC2-201ENST00000359680 WFDC9Q8NEX5 89 aa6.92□□□□□ -1.3
TRAPPC2-201ENST00000359680 UBL5Q9BZL1 73 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms