RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 ZFAND3Q9H8U3 227 aa6.54□□□□□ -1.36
COL6A6-201ENST00000358511 SMIM11BQ8TCY0 68 aa6.54□□□□□ -1.36
COL6A6-201ENST00000358511 C3orf84H3BNL1 204 aa6.53□□□□□ -1.36
COL6A6-201ENST00000358511 ODF3BA8MYP8 253 aa6.53□□□□□ -1.36
COL6A6-201ENST00000358511 DEFB4AO15263 64 aa6.53□□□□□ -1.36
COL6A6-201ENST00000358511 C1orf229Q6ZS94 237 aaPredicted RBP6.53□□□□□ -1.36
COL6A6-201ENST00000358511 KLK12Q9UKR0 248 aa6.53□□□□□ -1.36
COL6A6-201ENST00000358511 LOC107984640A0A0U1RRK4 108 aa6.53□□□□□ -1.36
COL6A6-201ENST00000358511 TRBV7-7A0A0K0K1E9 115 aa6.53□□□□□ -1.36
COL6A6-201ENST00000358511 LINC00269Q8N2A0 174 aa6.53□□□□□ -1.36
COL6A6-201ENST00000358511 REG3AQ06141 175 aa6.52□□□□□ -1.37
COL6A6-201ENST00000358511 C6orf99Q4VX62 202 aa6.52□□□□□ -1.37
COL6A6-201ENST00000358511 BPTFQ12830 3046 aa6.52□□□□□ -1.37
COL6A6-201ENST00000358511 POLQO75417 2590 aa6.52□□□□□ -1.37
COL6A6-201ENST00000358511 SHISA2Q6UWI4 295 aa6.52□□□□□ -1.37
COL6A6-201ENST00000358511 LY6G6CO95867 125 aa6.52□□□□□ -1.37
COL6A6-201ENST00000358511 IGF1P05019 195 aa6.52□□□□□ -1.37
COL6A6-201ENST00000358511 Q8N9L7 120 aa6.52□□□□□ -1.37
COL6A6-201ENST00000358511 PPDPFQ9H3Y8 114 aa6.52□□□□□ -1.37
COL6A6-201ENST00000358511 PRO0255Q9UI72 69 aa6.52□□□□□ -1.37
COL6A6-201ENST00000358511 SMAD5-AS1Q9Y6J3 95 aa6.52□□□□□ -1.37
COL6A6-201ENST00000358511 IGIPA6NJ69 53 aa6.51□□□□□ -1.37
COL6A6-201ENST00000358511 RNASE3P12724 160 aaKnown RBP6.51□□□□□ -1.37
COL6A6-201ENST00000358511 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.51□□□□□ -1.37
COL6A6-201ENST00000358511 FSHBP01225 129 aa6.51□□□□□ -1.37
COL6A6-201ENST00000358511 ZFP36P26651 326 aaKnown RBP6.51□□□□□ -1.37
COL6A6-201ENST00000358511 POLR2KP53803 58 aaKnown RBP6.51□□□□□ -1.37
COL6A6-201ENST00000358511 MAP6D1Q9H9H5 199 aa6.51□□□□□ -1.37
COL6A6-201ENST00000358511 CRIP2P52943 208 aaPredicted RBP6.51□□□□□ -1.37
COL6A6-201ENST00000358511 M0R2N4 97 aa6.51□□□□□ -1.37
COL6A6-201ENST00000358511 C1orf158Q8N1D5 194 aa6.51□□□□□ -1.37
COL6A6-201ENST00000358511 GAS8-AS1O95177 125 aa6.51□□□□□ -1.37
COL6A6-201ENST00000358511 FAM19A1Q7Z5A9 133 aa6.51□□□□□ -1.37
COL6A6-201ENST00000358511 CHCHD10Q8WYQ3 142 aaPredicted RBP6.51□□□□□ -1.37
COL6A6-201ENST00000358511 MDFIQ99750 246 aa6.51□□□□□ -1.37
COL6A6-201ENST00000358511 IGLV4-69A0A075B6H9 119 aa6.5□□□□□ -1.37
COL6A6-201ENST00000358511 CHD8Q9HCK8 2581 aa6.5□□□□□ -1.37
COL6A6-201ENST00000358511 A8MZ25 164 aa6.5□□□□□ -1.37
COL6A6-201ENST00000358511 MSMPQ1L6U9 139 aa6.5□□□□□ -1.37
COL6A6-201ENST00000358511 GRNP28799 593 aaKnown RBP6.5□□□□□ -1.37
COL6A6-201ENST00000358511 NANOS2P60321 138 aaKnown RBP6.5□□□□□ -1.37
COL6A6-201ENST00000358511 PLA2G2CQ5R387 149 aa6.5□□□□□ -1.37
COL6A6-201ENST00000358511 C22orf34Q6ZV56 151 aa6.49□□□□□ -1.37
COL6A6-201ENST00000358511 Q6ZTI0 123 aa6.49□□□□□ -1.37
COL6A6-201ENST00000358511 KLLNB2CW77 178 aa6.49□□□□□ -1.37
COL6A6-201ENST00000358511 FSTL3O95633 263 aa6.49□□□□□ -1.37
COL6A6-201ENST00000358511 RPS28P62857 69 aaKnown RBP6.49□□□□□ -1.37
COL6A6-201ENST00000358511 Q6ZQY7 126 aa6.49□□□□□ -1.37
COL6A6-201ENST00000358511 TRBV6-8A0A0A6YYG3 113 aa6.49□□□□□ -1.37
COL6A6-201ENST00000358511 RETNLBQ9BQ08 111 aa6.49□□□□□ -1.37
COL6A6-201ENST00000358511 K7EQG2 157 aa6.49□□□□□ -1.37
COL6A6-201ENST00000358511 RPL28P46779 137 aaKnown RBP6.48□□□□□ -1.37
COL6A6-201ENST00000358511 DEFB135Q30KP9 77 aa6.48□□□□□ -1.37
COL6A6-201ENST00000358511 MUC7Q8TAX7 377 aa6.48□□□□□ -1.37
COL6A6-201ENST00000358511 SPINK1P00995 79 aa6.48□□□□□ -1.37
COL6A6-201ENST00000358511 POM121L12Q8N7R1 296 aa6.48□□□□□ -1.37
COL6A6-201ENST00000358511 SOSTDC1Q6X4U4 206 aa6.48□□□□□ -1.37
COL6A6-201ENST00000358511 NTM-AS1Q6ZSK4 140 aa6.47□□□□□ -1.37
COL6A6-201ENST00000358511 DHRS4-AS1Q9P1J3 65 aa6.47□□□□□ -1.37
COL6A6-201ENST00000358511 Q8N814 137 aa6.47□□□□□ -1.37
COL6A6-201ENST00000358511 GOLGB1Q14789 3259 aaKnown RBP6.47□□□□□ -1.37
COL6A6-201ENST00000358511 A0A087WVE0 104 aa6.47□□□□□ -1.37
COL6A6-201ENST00000358511 IGLV9-49A0A0B4J1Y8 123 aa6.47□□□□□ -1.37
COL6A6-201ENST00000358511 LY6LH3BQJ8 138 aa6.47□□□□□ -1.37
COL6A6-201ENST00000358511 EBI3Q14213 229 aa6.47□□□□□ -1.37
COL6A6-201ENST00000358511 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.47□□□□□ -1.37
COL6A6-201ENST00000358511 A0A096LNJ9 63 aa6.47□□□□□ -1.37
COL6A6-201ENST00000358511 CRYGAP11844 174 aa6.46□□□□□ -1.37
COL6A6-201ENST00000358511 PRR9Q5T870 116 aa6.46□□□□□ -1.37
COL6A6-201ENST00000358511 C11orf21Q9P2W6 132 aa6.46□□□□□ -1.37
COL6A6-201ENST00000358511 C11orf45Q8TAV5 145 aa6.46□□□□□ -1.37
COL6A6-201ENST00000358511 PRORYQ9H606 182 aa6.46□□□□□ -1.37
COL6A6-201ENST00000358511 DCANP1Q8TF63 244 aa6.46□□□□□ -1.38
COL6A6-201ENST00000358511 FAM30AQ9NZY2 134 aa6.46□□□□□ -1.38
COL6A6-201ENST00000358511 TSPEAR-AS2P59090 65 aa6.46□□□□□ -1.38
COL6A6-201ENST00000358511 IGLV2-18A0A075B6J9 118 aa6.46□□□□□ -1.38
COL6A6-201ENST00000358511 USP24Q9UPU5 2620 aa6.46□□□□□ -1.38
COL6A6-201ENST00000358511 TRBV6-4A0A1B0GX49 114 aa6.45□□□□□ -1.38
COL6A6-201ENST00000358511 WFDC13Q8IUB5 93 aa6.45□□□□□ -1.38
COL6A6-201ENST00000358511 CD164L2Q6UWJ8 174 aa6.45□□□□□ -1.38
COL6A6-201ENST00000358511 PIP4P1Q86T03 277 aa6.45□□□□□ -1.38
COL6A6-201ENST00000358511 Q8N3U1 123 aa6.45□□□□□ -1.38
COL6A6-201ENST00000358511 PSPHP1O15172 72 aa6.45□□□□□ -1.38
COL6A6-201ENST00000358511 CRYGDP07320 174 aa6.45□□□□□ -1.38
COL6A6-201ENST00000358511 LINC00337Q8N6G1 96 aa6.45□□□□□ -1.38
COL6A6-201ENST00000358511 PSMG3-AS1Q96PY0 264 aa6.45□□□□□ -1.38
COL6A6-201ENST00000358511 ZNF73O43830 326 aaPredicted RBP6.45□□□□□ -1.38
COL6A6-201ENST00000358511 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.45□□□□□ -1.38
COL6A6-201ENST00000358511 TRBV7-6A0A0J9YX20 115 aa6.44□□□□□ -1.38
COL6A6-201ENST00000358511 DNAH12Q6ZR08 3092 aa6.44□□□□□ -1.38
COL6A6-201ENST00000358511 COX8CQ7Z4L0 72 aa6.44□□□□□ -1.38
COL6A6-201ENST00000358511 DAZAP2Q15038 168 aaPredicted RBP6.44□□□□□ -1.38
COL6A6-201ENST00000358511 A0A087WYN8 130 aa6.44□□□□□ -1.38
COL6A6-201ENST00000358511 LINC01548A6NM66 108 aa6.44□□□□□ -1.38
COL6A6-201ENST00000358511 ADAMTSL4-AS1Q5T5F5 129 aa6.44□□□□□ -1.38
COL6A6-201ENST00000358511 A6NDX4 124 aa6.44□□□□□ -1.38
COL6A6-201ENST00000358511 Q8IZM0 81 aa6.44□□□□□ -1.38
COL6A6-201ENST00000358511 WFDC10AQ9H1F0 79 aa6.44□□□□□ -1.38
COL6A6-201ENST00000358511 LINC01546A6NGU7 62 aa6.43□□□□□ -1.38
COL6A6-201ENST00000358511 XAGE1AQ9HD64 81 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms