RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 C2orf82Q6UX34 121 aa14.6□□□□□ -0.07
COL13A1-202ENST00000357811 K7EQD1 137 aa14.59□□□□□ -0.07
COL13A1-202ENST00000357811 MEIG1Q5JSS6 88 aa14.59□□□□□ -0.07
COL13A1-202ENST00000357811 PIK3CD-AS1Q5SR53 167 aa14.58□□□□□ -0.08
COL13A1-202ENST00000357811 PRIMA1Q86XR5 153 aa14.58□□□□□ -0.08
COL13A1-202ENST00000357811 H7C423 109 aa14.57□□□□□ -0.08
COL13A1-202ENST00000357811 COX6CP09669 75 aa14.57□□□□□ -0.08
COL13A1-202ENST00000357811 FAM110AQ9BQ89 295 aa14.56□□□□□ -0.08
COL13A1-202ENST00000357811 HECTD1Q9ULT8 2610 aa14.56□□□□□ -0.08
COL13A1-202ENST00000357811 SMIM1B2RUZ4 78 aa14.56□□□□□ -0.08
COL13A1-202ENST00000357811 NDUFA1O15239 70 aa14.56□□□□□ -0.08
COL13A1-202ENST00000357811 TRBV10-2A0A0K0K1G8 114 aa14.55□□□□□ -0.08
COL13A1-202ENST00000357811 TOMM7Q9P0U1 55 aa14.55□□□□□ -0.08
COL13A1-202ENST00000357811 GIG44P09565 113 aaPredicted RBP14.55□□□□□ -0.08
COL13A1-202ENST00000357811 TIRAPP58753 221 aa14.55□□□□□ -0.08
COL13A1-202ENST00000357811 HERVK_113P63121 156 aa14.55□□□□□ -0.08
COL13A1-202ENST00000357811 CIRBPQ14011 172 aaKnown RBP14.55□□□□□ -0.08
COL13A1-202ENST00000357811 SOSTDC1Q6X4U4 206 aa14.55□□□□□ -0.08
COL13A1-202ENST00000357811 C15orf53Q8NAA6 179 aa14.55□□□□□ -0.08
COL13A1-202ENST00000357811 LINC00308Q8TCZ7 52 aa14.55□□□□□ -0.08
COL13A1-202ENST00000357811 UBE2L6O14933 153 aa14.54□□□□□ -0.08
COL13A1-202ENST00000357811 YAE1D1Q9NRH1 226 aa14.53□□□□□ -0.08
COL13A1-202ENST00000357811 PDZD2O15018 2839 aa14.53□□□□□ -0.08
COL13A1-202ENST00000357811 UNC79Q9P2D8 2635 aa14.53□□□□□ -0.08
COL13A1-202ENST00000357811 TRAV8-4A0A0B4J246 113 aa14.52□□□□□ -0.08
COL13A1-202ENST00000357811 LINC01006Q8NI28 216 aa14.52□□□□□ -0.08
COL13A1-202ENST00000357811 UBE2WQ96B02 151 aa14.52□□□□□ -0.08
COL13A1-202ENST00000357811 CDC42SE2Q9NRR3 84 aa14.52□□□□□ -0.08
COL13A1-202ENST00000357811 IGLV5-45A0A087WSX0 123 aa14.52□□□□□ -0.09
COL13A1-202ENST00000357811 LRRC75A-AS1Q8N1F1 130 aa14.51□□□□□ -0.09
COL13A1-202ENST00000357811 IL17DQ8TAD2 202 aa14.51□□□□□ -0.09
COL13A1-202ENST00000357811 TRGV4A0A0C4DH28 118 aa14.5□□□□□ -0.09
COL13A1-202ENST00000357811 IGLV5-39A0A0G2JS06 123 aa14.5□□□□□ -0.09
COL13A1-202ENST00000357811 DAZ2Q13117 558 aaKnown RBP14.5□□□□□ -0.09
COL13A1-202ENST00000357811 DAZ4Q86SG3 579 aaKnown RBP14.5□□□□□ -0.09
COL13A1-202ENST00000357811 DAZ3Q9NR90 486 aaKnown RBP14.5□□□□□ -0.09
COL13A1-202ENST00000357811 TMEM243Q9BU79 118 aa14.49□□□□□ -0.09
COL13A1-202ENST00000357811 TRAV25A0A0B4J276 109 aa14.49□□□□□ -0.09
COL13A1-202ENST00000357811 DEFB130BP0DP73 79 aa14.49□□□□□ -0.09
COL13A1-202ENST00000357811 DEFB130AP0DP74 79 aa14.49□□□□□ -0.09
COL13A1-202ENST00000357811 PLAC8L1A1L4L8 177 aa14.48□□□□□ -0.09
COL13A1-202ENST00000357811 C11orf68Q9H3H3 251 aaKnown RBP14.48□□□□□ -0.09
COL13A1-202ENST00000357811 LST1O00453 97 aa14.47□□□□□ -0.09
COL13A1-202ENST00000357811 TRBV10-1A0A0K0K1A3 114 aa14.47□□□□□ -0.09
COL13A1-202ENST00000357811 CHCHD5Q9BSY4 110 aa14.47□□□□□ -0.09
COL13A1-202ENST00000357811 IGLV4-60A0A075B6I1 120 aa14.46□□□□□ -0.09
COL13A1-202ENST00000357811 F5H768 121 aa14.46□□□□□ -0.09
COL13A1-202ENST00000357811 TIMM17BO60830 172 aa14.45□□□□□ -0.1
COL13A1-202ENST00000357811 A0A096LPF7 62 aa14.45□□□□□ -0.1
COL13A1-202ENST00000357811 TMEM86BQ8N661 226 aa14.45□□□□□ -0.1
COL13A1-202ENST00000357811 SMR3AQ99954 134 aa14.44□□□□□ -0.1
COL13A1-202ENST00000357811 C5orf38Q86SI9 138 aa14.43□□□□□ -0.1
COL13A1-202ENST00000357811 ANK3Q12955 4377 aaKnown RBP14.43□□□□□ -0.1
COL13A1-202ENST00000357811 CLPSL2Q6UWE3 100 aa14.42□□□□□ -0.1
COL13A1-202ENST00000357811 TENM1Q9UKZ4 2725 aa14.42□□□□□ -0.1
COL13A1-202ENST00000357811 C16orf74Q96GX8 76 aa14.41□□□□□ -0.1
COL13A1-202ENST00000357811 MIR7-3HGQ8N6C7 128 aa14.41□□□□□ -0.1
COL13A1-202ENST00000357811 C19orf73Q9NVV2 129 aa14.41□□□□□ -0.1
COL13A1-202ENST00000357811 PFN2P35080 140 aa14.4□□□□□ -0.1
COL13A1-202ENST00000357811 CSDC2Q9Y534 153 aaKnown RBP14.4□□□□□ -0.1
COL13A1-202ENST00000357811 M0QXV9 152 aa14.4□□□□□ -0.1
COL13A1-202ENST00000357811 PPDPFQ9H3Y8 114 aa14.4□□□□□ -0.1
COL13A1-202ENST00000357811 ATRQ13535 2644 aa14.39□□□□□ -0.11
COL13A1-202ENST00000357811 Q9HAA7 133 aa14.39□□□□□ -0.11
COL13A1-202ENST00000357811 IGLV1-51P01701 117 aa14.39□□□□□ -0.11
COL13A1-202ENST00000357811 LINC00158P58513 81 aa14.39□□□□□ -0.11
COL13A1-202ENST00000357811 Q6Q795 121 aa14.39□□□□□ -0.11
COL13A1-202ENST00000357811 FAM218AQ96MZ4 157 aa14.39□□□□□ -0.11
COL13A1-202ENST00000357811 H3BT86 120 aa14.38□□□□□ -0.11
COL13A1-202ENST00000357811 KRTAP1-1Q07627 177 aa14.38□□□□□ -0.11
COL13A1-202ENST00000357811 CSNK1G2-AS1Q8NCQ2 148 aa14.37□□□□□ -0.11
COL13A1-202ENST00000357811 FHL2Q14192 279 aa14.37□□□□□ -0.11
COL13A1-202ENST00000357811 COX7B2Q8TF08 81 aa14.37□□□□□ -0.11
COL13A1-202ENST00000357811 COX7A2LO14548 114 aa14.36□□□□□ -0.11
COL13A1-202ENST00000357811 DEFB4AO15263 64 aa14.36□□□□□ -0.11
COL13A1-202ENST00000357811 OTOGQ6ZRI0 2925 aa14.36□□□□□ -0.11
COL13A1-202ENST00000357811 TRBV6-8A0A0A6YYG3 113 aa14.35□□□□□ -0.11
COL13A1-202ENST00000357811 TRBV6-4A0A1B0GX49 114 aa14.34□□□□□ -0.11
COL13A1-202ENST00000357811 XCL1P47992 114 aa14.34□□□□□ -0.11
COL13A1-202ENST00000357811 LINC00337Q8N6G1 96 aa14.34□□□□□ -0.11
COL13A1-202ENST00000357811 SND1-IT1Q9HBX3 110 aa14.33□□□□□ -0.12
COL13A1-202ENST00000357811 SPATA3Q8NHX4 192 aa14.32□□□□□ -0.12
COL13A1-202ENST00000357811 RNASE1P07998 156 aaKnown RBP14.31□□□□□ -0.12
COL13A1-202ENST00000357811 FAM19A3Q7Z5A8 133 aa14.31□□□□□ -0.12
COL13A1-202ENST00000357811 BAALC-AS2P0C853 105 aa14.31□□□□□ -0.12
COL13A1-202ENST00000357811 LINC00482Q8N8I6 264 aa14.31□□□□□ -0.12
COL13A1-202ENST00000357811 GYPEP15421 78 aa14.31□□□□□ -0.12
COL13A1-202ENST00000357811 FAM236AA0A1B0GUQ0 79 aa14.3□□□□□ -0.12
COL13A1-202ENST00000357811 FAM236BA0A1B0GV22 79 aa14.3□□□□□ -0.12
COL13A1-202ENST00000357811 CRPP02741 224 aa14.3□□□□□ -0.12
COL13A1-202ENST00000357811 IGKV2-28A0A075B6P5 120 aa14.3□□□□□ -0.12
COL13A1-202ENST00000357811 IGKV2D-28P01615 120 aa14.3□□□□□ -0.12
COL13A1-202ENST00000357811 PF4P02776 101 aa14.3□□□□□ -0.12
COL13A1-202ENST00000357811 TRRAPQ9Y4A5 3859 aa14.3□□□□□ -0.12
COL13A1-202ENST00000357811 IGHV3OR16-9A0A0B4J2B5 98 aa14.29□□□□□ -0.12
COL13A1-202ENST00000357811 ATP5G1P05496 136 aa14.29□□□□□ -0.12
COL13A1-202ENST00000357811 OVOL2Q9BRP0 275 aa14.29□□□□□ -0.12
COL13A1-202ENST00000357811 KRTAP10-3P60369 221 aa14.28□□□□□ -0.12
COL13A1-202ENST00000357811 OR13C6PQ8NH95 151 aa14.28□□□□□ -0.12
COL13A1-202ENST00000357811 Q8N3U1 123 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms