RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 TRBV6-4A0A1B0GX49 114 aa12.57□□□□□ -0.4
RTN4-204ENST00000357732 NDUFA7O95182 113 aa12.57□□□□□ -0.4
RTN4-204ENST00000357732 LINC00643Q86TS7 51 aa12.57□□□□□ -0.4
RTN4-204ENST00000357732 C16orf74Q96GX8 76 aa12.57□□□□□ -0.4
RTN4-204ENST00000357732 PTPN13Q12923 2485 aa12.57□□□□□ -0.4
RTN4-204ENST00000357732 A0A0U1RRA0 63 aa12.56□□□□□ -0.4
RTN4-204ENST00000357732 CCDC179H3BU77 68 aa12.56□□□□□ -0.4
RTN4-204ENST00000357732 SS18L2Q9UHA2 77 aa12.56□□□□□ -0.4
RTN4-204ENST00000357732 UBR5O95071 2799 aaPredicted RBP12.56□□□□□ -0.4
RTN4-204ENST00000357732 CRPP02741 224 aa12.56□□□□□ -0.4
RTN4-204ENST00000357732 BAALC-AS2P0C853 105 aa12.56□□□□□ -0.4
RTN4-204ENST00000357732 FAM110AQ9BQ89 295 aa12.56□□□□□ -0.4
RTN4-204ENST00000357732 ZNF469Q96JG9 3925 aaPredicted RBP12.55□□□□□ -0.4
RTN4-204ENST00000357732 NAV2Q8IVL1 2488 aa12.55□□□□□ -0.4
RTN4-204ENST00000357732 ABCA12Q86UK0 2595 aa12.55□□□□□ -0.4
RTN4-204ENST00000357732 COX7B2Q8TF08 81 aa12.55□□□□□ -0.4
RTN4-204ENST00000357732 ATP5G1P05496 136 aa12.54□□□□□ -0.4
RTN4-204ENST00000357732 C11orf44Q8N8P7 122 aa12.54□□□□□ -0.4
RTN4-204ENST00000357732 NOP10Q9NPE3 64 aaKnown RBP12.53□□□□□ -0.4
RTN4-204ENST00000357732 USP24Q9UPU5 2620 aa12.53□□□□□ -0.4
RTN4-204ENST00000357732 CCL24O00175 119 aa12.52□□□□□ -0.4
RTN4-204ENST00000357732 MYO9AB2RTY4 2548 aa12.52□□□□□ -0.41
RTN4-204ENST00000357732 A0A1W2PRX2 142 aa12.51□□□□□ -0.41
RTN4-204ENST00000357732 CXCL5P42830 114 aa12.51□□□□□ -0.41
RTN4-204ENST00000357732 KRTAP1-3Q8IUG1 177 aa12.51□□□□□ -0.41
RTN4-204ENST00000357732 ZNF843Q8N446 348 aa12.51□□□□□ -0.41
RTN4-204ENST00000357732 PLAC8L1A1L4L8 177 aa12.5□□□□□ -0.41
RTN4-204ENST00000357732 IBA57-AS1B1ANH7 110 aa12.5□□□□□ -0.41
RTN4-204ENST00000357732 H0YGX0 51 aa12.5□□□□□ -0.41
RTN4-204ENST00000357732 SND1-IT1Q9HBX3 110 aa12.5□□□□□ -0.41
RTN4-204ENST00000357732 MIR7-3HGQ8N6C7 128 aa12.5□□□□□ -0.41
RTN4-204ENST00000357732 FAM218AQ96MZ4 157 aa12.5□□□□□ -0.41
RTN4-204ENST00000357732 C22orf24Q9Y442 160 aa12.5□□□□□ -0.41
RTN4-204ENST00000357732 TRGV2A0A075B6R0 118 aa12.49□□□□□ -0.41
RTN4-204ENST00000357732 MALP21145 153 aa12.49□□□□□ -0.41
RTN4-204ENST00000357732 CHD6Q8TD26 2715 aa12.48□□□□□ -0.41
RTN4-204ENST00000357732 IGHV3OR16-9A0A0B4J2B5 98 aa12.48□□□□□ -0.41
RTN4-204ENST00000357732 GIG44P09565 113 aaPredicted RBP12.48□□□□□ -0.41
RTN4-204ENST00000357732 IGKV2-28A0A075B6P5 120 aa12.47□□□□□ -0.41
RTN4-204ENST00000357732 DNAJC9-AS1A6NH13 148 aa12.47□□□□□ -0.41
RTN4-204ENST00000357732 IGKV2D-28P01615 120 aa12.47□□□□□ -0.41
RTN4-204ENST00000357732 LINC00337Q8N6G1 96 aa12.47□□□□□ -0.41
RTN4-204ENST00000357732 SMCR5Q8TEV8 140 aa12.47□□□□□ -0.41
RTN4-204ENST00000357732 A0A087WZ39 114 aa12.47□□□□□ -0.41
RTN4-204ENST00000357732 TRBV6-8A0A0A6YYG3 113 aa12.47□□□□□ -0.41
RTN4-204ENST00000357732 DNAL4O96015 105 aa12.47□□□□□ -0.41
RTN4-204ENST00000357732 TMEM126AQ9H061 195 aa12.47□□□□□ -0.41
RTN4-204ENST00000357732 FAM236AA0A1B0GUQ0 79 aa12.46□□□□□ -0.41
RTN4-204ENST00000357732 FAM236BA0A1B0GV22 79 aa12.46□□□□□ -0.41
RTN4-204ENST00000357732 CHCHD5Q9BSY4 110 aa12.46□□□□□ -0.41
RTN4-204ENST00000357732 EPG5Q9HCE0 2579 aa12.46□□□□□ -0.42
RTN4-204ENST00000357732 TRGV4A0A0C4DH28 118 aa12.45□□□□□ -0.42
RTN4-204ENST00000357732 CUBNO60494 3623 aa12.45□□□□□ -0.42
RTN4-204ENST00000357732 LINC00158P58513 81 aa12.44□□□□□ -0.42
RTN4-204ENST00000357732 C5orf38Q86SI9 138 aa12.44□□□□□ -0.42
RTN4-204ENST00000357732 TLN2Q9Y4G6 2542 aa12.44□□□□□ -0.42
RTN4-204ENST00000357732 ESM1Q9NQ30 184 aa12.44□□□□□ -0.42
RTN4-204ENST00000357732 APCP25054 2843 aa12.43□□□□□ -0.42
RTN4-204ENST00000357732 CSNK1G2-AS1Q8NCQ2 148 aa12.43□□□□□ -0.42
RTN4-204ENST00000357732 WFDC11Q8NEX6 87 aa12.43□□□□□ -0.42
RTN4-204ENST00000357732 SMIM11BQ8TCY0 68 aa12.43□□□□□ -0.42
RTN4-204ENST00000357732 NBPF19A0A087WUL8 3843 aa12.43□□□□□ -0.42
RTN4-204ENST00000357732 CCL18P55774 89 aa12.43□□□□□ -0.42
RTN4-204ENST00000357732 OBSCN-AS1Q96MR7 158 aa12.43□□□□□ -0.42
RTN4-204ENST00000357732 TOMM7Q9P0U1 55 aa12.43□□□□□ -0.42
RTN4-204ENST00000357732 LOC100131303A0A0U1RQF7 123 aa12.42□□□□□ -0.42
RTN4-204ENST00000357732 FHL2Q14192 279 aa12.42□□□□□ -0.42
RTN4-204ENST00000357732 IGLV1-51P01701 117 aa12.41□□□□□ -0.42
RTN4-204ENST00000357732 C19orf73Q9NVV2 129 aa12.41□□□□□ -0.42
RTN4-204ENST00000357732 IGLV4-60A0A075B6I1 120 aa12.41□□□□□ -0.42
RTN4-204ENST00000357732 LINC01561Q8N1V8 128 aa12.41□□□□□ -0.42
RTN4-204ENST00000357732 NF1P21359 2839 aa12.41□□□□□ -0.42
RTN4-204ENST00000357732 SONP18583 2426 aaKnown RBP12.4□□□□□ -0.42
RTN4-204ENST00000357732 GAGE2AQ6NT46 116 aa12.4□□□□□ -0.42
RTN4-204ENST00000357732 Q9HAA7 133 aa12.4□□□□□ -0.42
RTN4-204ENST00000357732 LY6G6DO95868 133 aa12.4□□□□□ -0.43
RTN4-204ENST00000357732 C16orf95Q9H693 158 aa12.4□□□□□ -0.43
RTN4-204ENST00000357732 ITPR3Q14573 2671 aa12.39□□□□□ -0.43
RTN4-204ENST00000357732 UQCRQO14949 82 aa12.38□□□□□ -0.43
RTN4-204ENST00000357732 WFDC10AQ9H1F0 79 aa12.38□□□□□ -0.43
RTN4-204ENST00000357732 NIPBLQ6KC79 2804 aaeCLIP12.38□□□□□ -0.431e-6■■■□□ 18.2
RTN4-204ENST00000357732 WNK1Q9H4A3 2382 aa12.38□□□□□ -0.43
RTN4-204ENST00000357732 A0A087WYN8 130 aa12.37□□□□□ -0.43
RTN4-204ENST00000357732 LINC00959A0A1B0GUT2 108 aa12.37□□□□□ -0.43
RTN4-204ENST00000357732 C3orf22Q8N5N4 141 aa12.37□□□□□ -0.43
RTN4-204ENST00000357732 KIR2DL5BQ8NHK3 375 aa12.37□□□□□ -0.43
RTN4-204ENST00000357732 A0A1B0GUV1 79 aa12.36□□□□□ -0.43
RTN4-204ENST00000357732 A0A1B0GX51 115 aa12.36□□□□□ -0.43
RTN4-204ENST00000357732 RPL35AP18077 110 aaKnown RBP12.36□□□□□ -0.43
RTN4-204ENST00000357732 Q8IZM0 81 aa12.36□□□□□ -0.43
RTN4-204ENST00000357732 KLK5Q9Y337 293 aaPredicted RBP12.36□□□□□ -0.43
RTN4-204ENST00000357732 HIST1H4AP62805 103 aaKnown RBP12.35□□□□□ -0.43
RTN4-204ENST00000357732 IGKV3OR2-268A0A0C4DH90 116 aa12.35□□□□□ -0.43
RTN4-204ENST00000357732 PAX4O43316 350 aa12.35□□□□□ -0.43
RTN4-204ENST00000357732 LINC00612Q8N6U2 182 aa12.35□□□□□ -0.43
RTN4-204ENST00000357732 C6orf226Q5I0X4 101 aa12.34□□□□□ -0.43
RTN4-204ENST00000357732 LINC00526Q96FQ7 95 aa12.34□□□□□ -0.43
RTN4-204ENST00000357732 SS18Q15532 418 aa12.34□□□□□ -0.43
RTN4-204ENST00000357732 ATOX1O00244 68 aa12.33□□□□□ -0.44
RTN4-204ENST00000357732 Q6JHZ5 121 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms