RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 OBSCN-AS1Q96MR7 158 aa7.66□□□□□ -1.18
CAPN3-205ENST00000357568 IGHV3OR16-12A0A075B7B8 117 aa7.65□□□□□ -1.18
CAPN3-205ENST00000357568 IGKV3-20P01619 116 aa7.65□□□□□ -1.18
CAPN3-205ENST00000357568 RBMY1A1P0DJD3 496 aaKnown RBP7.65□□□□□ -1.18
CAPN3-205ENST00000357568 RBMY1CP0DJD4 496 aa7.65□□□□□ -1.18
CAPN3-205ENST00000357568 BLCAPP62952 87 aa7.65□□□□□ -1.18
CAPN3-205ENST00000357568 RBMY1FQ15415 496 aaKnown RBP7.65□□□□□ -1.18
CAPN3-205ENST00000357568 LY6EQ16553 131 aa7.65□□□□□ -1.18
CAPN3-205ENST00000357568 OTOGQ6ZRI0 2925 aa7.65□□□□□ -1.18
CAPN3-205ENST00000357568 INAFM1C9JVW0 142 aa7.65□□□□□ -1.18
CAPN3-205ENST00000357568 RPL18AQ02543 176 aaKnown RBP7.65□□□□□ -1.18
CAPN3-205ENST00000357568 DGAT2L7PQ6IED9 249 aa7.65□□□□□ -1.18
CAPN3-205ENST00000357568 GAGE2AQ6NT46 116 aa7.65□□□□□ -1.18
CAPN3-205ENST00000357568 BRD3OSQ6XYD6 125 aa7.65□□□□□ -1.18
CAPN3-205ENST00000357568 KIR2DL5BQ8NHK3 375 aa7.65□□□□□ -1.18
CAPN3-205ENST00000357568 GHRHP01286 108 aa7.65□□□□□ -1.19
CAPN3-205ENST00000357568 PROK1P58294 105 aa7.65□□□□□ -1.19
CAPN3-205ENST00000357568 TMEM258P61165 79 aa7.65□□□□□ -1.19
CAPN3-205ENST00000357568 Q8N2B8 174 aa7.65□□□□□ -1.19
CAPN3-205ENST00000357568 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.65□□□□□ -1.19
CAPN3-205ENST00000357568 H0YGX0 51 aa7.64□□□□□ -1.19
CAPN3-205ENST00000357568 PRIMA1Q86XR5 153 aa7.64□□□□□ -1.19
CAPN3-205ENST00000357568 CCDC168Q8NDH2 2452 aa7.64□□□□□ -1.19
CAPN3-205ENST00000357568 COX6A2Q02221 97 aa7.64□□□□□ -1.19
CAPN3-205ENST00000357568 Q6ZSN1 163 aa7.64□□□□□ -1.19
CAPN3-205ENST00000357568 TMEM86BQ8N661 226 aa7.64□□□□□ -1.19
CAPN3-205ENST00000357568 ANK3Q12955 4377 aaKnown RBP7.64□□□□□ -1.19
CAPN3-205ENST00000357568 MED13LQ71F56 2210 aa7.63□□□□□ -1.19
CAPN3-205ENST00000357568 IGHV3-73A0A0B4J1V6 119 aa7.63□□□□□ -1.19
CAPN3-205ENST00000357568 MRAPQ8TCY5 172 aa7.63□□□□□ -1.19
CAPN3-205ENST00000357568 CSMD1Q96PZ7 3565 aa7.63□□□□□ -1.19
CAPN3-205ENST00000357568 VPS13CQ709C8 3753 aa7.63□□□□□ -1.19
CAPN3-205ENST00000357568 C4orf26Q17RF5 130 aa7.63□□□□□ -1.19
CAPN3-205ENST00000357568 Q6YL49 198 aa7.63□□□□□ -1.19
CAPN3-205ENST00000357568 C11orf72Q8NBR9 251 aa7.63□□□□□ -1.19
CAPN3-205ENST00000357568 FAM218AQ96MZ4 157 aa7.63□□□□□ -1.19
CAPN3-205ENST00000357568 TRBV10-1A0A0K0K1A3 114 aa7.62□□□□□ -1.19
CAPN3-205ENST00000357568 DNAL4O96015 105 aa7.62□□□□□ -1.19
CAPN3-205ENST00000357568 CRPP02741 224 aa7.62□□□□□ -1.19
CAPN3-205ENST00000357568 DEFB112Q30KQ8 113 aa7.62□□□□□ -1.19
CAPN3-205ENST00000357568 ZNF469Q96JG9 3925 aaPredicted RBP7.62□□□□□ -1.19
CAPN3-205ENST00000357568 TNP2Q05952 138 aa7.62□□□□□ -1.19
CAPN3-205ENST00000357568 SERP2Q8N6R1 65 aa7.62□□□□□ -1.19
CAPN3-205ENST00000357568 SETXQ7Z333 2677 aaKnown RBP7.61□□□□□ -1.19
CAPN3-205ENST00000357568 HRCT1Q6UXD1 115 aa7.61□□□□□ -1.19
CAPN3-205ENST00000357568 CREBBPQ92793 2442 aa7.6□□□□□ -1.19
CAPN3-205ENST00000357568 FLNAP21333 2647 aaKnown RBP7.6□□□□□ -1.19
CAPN3-205ENST00000357568 NOTCH2Q04721 2471 aa7.6□□□□□ -1.19
CAPN3-205ENST00000357568 HILS1P60008 231 aa7.59□□□□□ -1.19
CAPN3-205ENST00000357568 ATP5EP2Q5VTU8 51 aa7.59□□□□□ -1.19
CAPN3-205ENST00000357568 NACAE9PAV3 2078 aa7.59□□□□□ -1.19
CAPN3-205ENST00000357568 RBMY1BA6NDE4 496 aaKnown RBP7.59□□□□□ -1.19
CAPN3-205ENST00000357568 RBMY1EA6NEQ0 496 aaKnown RBP7.59□□□□□ -1.19
CAPN3-205ENST00000357568 KNCNA6PVL3 124 aa7.59□□□□□ -1.19
CAPN3-205ENST00000357568 RBMY1DP0C7P1 496 aaKnown RBP7.59□□□□□ -1.19
CAPN3-205ENST00000357568 SYNJ2BPP57105 145 aa7.59□□□□□ -1.19
CAPN3-205ENST00000357568 S100A7L2Q5SY68 101 aa7.59□□□□□ -1.19
CAPN3-205ENST00000357568 UBE2E2Q96LR5 201 aa7.59□□□□□ -1.19
CAPN3-205ENST00000357568 UPK3BQ9BT76 320 aa7.59□□□□□ -1.19
CAPN3-205ENST00000357568 CDC42SE2Q9NRR3 84 aa7.59□□□□□ -1.19
CAPN3-205ENST00000357568 Q9UF83 564 aa7.59□□□□□ -1.19
CAPN3-205ENST00000357568 NDUFC2-KCTD14E9PQ53 114 aa7.58□□□□□ -1.2
CAPN3-205ENST00000357568 IL17DQ8TAD2 202 aa7.58□□□□□ -1.2
CAPN3-205ENST00000357568 INSP01308 110 aa7.58□□□□□ -1.2
CAPN3-205ENST00000357568 IGHV3-38A0A0C4DH36 116 aa7.57□□□□□ -1.2
CAPN3-205ENST00000357568 HOXD3P31249 432 aaPredicted RBP7.57□□□□□ -1.2
CAPN3-205ENST00000357568 DEFB131AP59861 70 aa7.57□□□□□ -1.2
CAPN3-205ENST00000357568 RPL36AP83881 106 aaKnown RBP7.57□□□□□ -1.2
CAPN3-205ENST00000357568 RPL36ALQ969Q0 106 aaKnown RBP7.57□□□□□ -1.2
CAPN3-205ENST00000357568 TEX15Q9BXT5 2789 aa7.57□□□□□ -1.2
CAPN3-205ENST00000357568 RNASE1P07998 156 aaKnown RBP7.57□□□□□ -1.2
CAPN3-205ENST00000357568 HIVEP1P15822 2718 aa7.56□□□□□ -1.2
CAPN3-205ENST00000357568 DNAJC9-AS1A6NH13 148 aa7.56□□□□□ -1.2
CAPN3-205ENST00000357568 LINC00337Q8N6G1 96 aa7.56□□□□□ -1.2
CAPN3-205ENST00000357568 IGKV2-28A0A075B6P5 120 aa7.56□□□□□ -1.2
CAPN3-205ENST00000357568 hADV29S1A0JD25 119 aa7.56□□□□□ -1.2
CAPN3-205ENST00000357568 IGKV2D-28P01615 120 aa7.56□□□□□ -1.2
CAPN3-205ENST00000357568 IGHV4-59P01825 116 aa7.56□□□□□ -1.2
CAPN3-205ENST00000357568 SND1-IT1Q9HBX3 110 aa7.56□□□□□ -1.2
CAPN3-205ENST00000357568 IBA57-AS1B1ANH7 110 aa7.55□□□□□ -1.2
CAPN3-205ENST00000357568 DPH3Q96FX2 82 aa7.55□□□□□ -1.2
CAPN3-205ENST00000357568 K7EQD1 137 aa7.55□□□□□ -1.2
CAPN3-205ENST00000357568 HTN1P15515 57 aa7.55□□□□□ -1.2
CAPN3-205ENST00000357568 Q5XG85 94 aa7.55□□□□□ -1.2
CAPN3-205ENST00000357568 SMIM11BQ8TCY0 68 aa7.55□□□□□ -1.2
CAPN3-205ENST00000357568 COX7B2Q8TF08 81 aa7.55□□□□□ -1.2
CAPN3-205ENST00000357568 LINC00167Q96N53 147 aa7.55□□□□□ -1.2
CAPN3-205ENST00000357568 Q9HAA7 133 aa7.55□□□□□ -1.2
CAPN3-205ENST00000357568 F8P00451 2351 aa7.55□□□□□ -1.2
CAPN3-205ENST00000357568 BCE1O60756 84 aa7.55□□□□□ -1.2
CAPN3-205ENST00000357568 ESM1Q9NQ30 184 aa7.55□□□□□ -1.2
CAPN3-205ENST00000357568 TRAV13-1A0A0B4J241 112 aa7.54□□□□□ -1.2
CAPN3-205ENST00000357568 TRBV10-3A0A0K0K1G6 114 aa7.54□□□□□ -1.2
CAPN3-205ENST00000357568 A0A0U1RRA0 63 aa7.54□□□□□ -1.2
CAPN3-205ENST00000357568 USP17L23D6RBM5 183 aa7.54□□□□□ -1.2
CAPN3-205ENST00000357568 OXTP01178 125 aa7.54□□□□□ -1.2
CAPN3-205ENST00000357568 LINC00846Q9NV44 126 aa7.54□□□□□ -1.2
CAPN3-205ENST00000357568 HIVEP2P31629 2446 aa7.54□□□□□ -1.2
CAPN3-205ENST00000357568 A0A087WYN8 130 aa7.54□□□□□ -1.2
CAPN3-205ENST00000357568 SEC61GP60059 68 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms