RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 SMIM2Q9BVW6 85 aa2.72□□□□□ -1.97
LIG4-201ENST00000356922 IGLV10-54A0A075B6I4 117 aa2.72□□□□□ -1.97
LIG4-201ENST00000356922 TRAV13-1A0A0B4J241 112 aa2.72□□□□□ -1.97
LIG4-201ENST00000356922 LAGE3Q14657 143 aa2.72□□□□□ -1.97
LIG4-201ENST00000356922 ORMDL2Q53FV1 153 aa2.72□□□□□ -1.97
LIG4-201ENST00000356922 TTC32Q5I0X7 151 aa2.72□□□□□ -1.97
LIG4-201ENST00000356922 LELP1Q5T871 98 aa2.72□□□□□ -1.97
LIG4-201ENST00000356922 LGALS9CQ6DKI2 356 aa2.72□□□□□ -1.97
LIG4-201ENST00000356922 BOD1L2Q8IYS8 172 aa2.72□□□□□ -1.97
LIG4-201ENST00000356922 SCGB3A1Q96QR1 104 aa2.72□□□□□ -1.97
LIG4-201ENST00000356922 GEMIN7Q9H840 131 aaKnown RBP2.72□□□□□ -1.97
LIG4-201ENST00000356922 CYSLTR1Q9Y271 337 aa2.72□□□□□ -1.97
LIG4-201ENST00000356922 MRPS16Q9Y3D3 137 aaKnown RBP2.72□□□□□ -1.97
LIG4-201ENST00000356922 ERASQ7Z444 233 aa2.71□□□□□ -1.98
LIG4-201ENST00000356922 KRTAP17-1Q9BYP8 105 aa2.71□□□□□ -1.98
LIG4-201ENST00000356922 MALP21145 153 aa2.71□□□□□ -1.98
LIG4-201ENST00000356922 RPL24P83731 157 aaKnown RBP2.71□□□□□ -1.98
LIG4-201ENST00000356922 LINC00173Q6ZV60 143 aa2.71□□□□□ -1.98
LIG4-201ENST00000356922 FAM19A2Q8N3H0 131 aa2.71□□□□□ -1.98
LIG4-201ENST00000356922 C10orf126Q8N4M7 172 aa2.71□□□□□ -1.98
LIG4-201ENST00000356922 MAPKAPK5-AS1Q8N8E1 139 aa2.71□□□□□ -1.98
LIG4-201ENST00000356922 C20orf203Q8NBC4 194 aa2.71□□□□□ -1.98
LIG4-201ENST00000356922 DPH3Q96FX2 82 aa2.71□□□□□ -1.98
LIG4-201ENST00000356922 VCX2Q9H322 139 aa2.71□□□□□ -1.98
LIG4-201ENST00000356922 DNAH8Q96JB1 4490 aa2.71□□□□□ -1.98
LIG4-201ENST00000356922 PAPPA-AS1Q5QFB9 102 aa2.71□□□□□ -1.98
LIG4-201ENST00000356922 RMI2Q96E14 147 aa2.71□□□□□ -1.98
LIG4-201ENST00000356922 UPK3BQ9BT76 320 aa2.71□□□□□ -1.98
LIG4-201ENST00000356922 C1orf43Q9BWL3 253 aa2.71□□□□□ -1.98
LIG4-201ENST00000356922 KIAA1109Q2LD37 5005 aa2.7□□□□□ -1.98
LIG4-201ENST00000356922 LCE6AA0A183 80 aa2.7□□□□□ -1.98
LIG4-201ENST00000356922 IGLC3P0DOY3 106 aa2.7□□□□□ -1.98
LIG4-201ENST00000356922 FGF6P10767 208 aa2.7□□□□□ -1.98
LIG4-201ENST00000356922 FUSP35637 526 aaKnown RBP eCLIP2.7□□□□□ -1.98
LIG4-201ENST00000356922 ENHOQ6UWT2 76 aa2.7□□□□□ -1.98
LIG4-201ENST00000356922 Q6ZR54 194 aa2.7□□□□□ -1.98
LIG4-201ENST00000356922 LINC00269Q8N2A0 174 aa2.7□□□□□ -1.98
LIG4-201ENST00000356922 Q8N8P6 123 aa2.7□□□□□ -1.98
LIG4-201ENST00000356922 SS18L2Q9UHA2 77 aa2.7□□□□□ -1.98
LIG4-201ENST00000356922 SERF1AO75920 110 aa2.7□□□□□ -1.98
LIG4-201ENST00000356922 DNAH10OSP0CZ25 163 aa2.7□□□□□ -1.98
LIG4-201ENST00000356922 SS18Q15532 418 aa2.7□□□□□ -1.98
LIG4-201ENST00000356922 C2orf66Q6UXQ4 117 aa2.7□□□□□ -1.98
LIG4-201ENST00000356922 UBE2D4Q9Y2X8 147 aa2.7□□□□□ -1.98
LIG4-201ENST00000356922 LINC01546A6NGU7 62 aa2.7□□□□□ -1.98
LIG4-201ENST00000356922 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.7□□□□□ -1.98
LIG4-201ENST00000356922 XCL1P47992 114 aa2.7□□□□□ -1.98
LIG4-201ENST00000356922 TIRAPP58753 221 aa2.7□□□□□ -1.98
LIG4-201ENST00000356922 RPL32P62910 135 aaKnown RBP2.7□□□□□ -1.98
LIG4-201ENST00000356922 C1orf134Q5TEV5 83 aa2.7□□□□□ -1.98
LIG4-201ENST00000356922 NBDYA0A0U1RRE5 68 aa2.69□□□□□ -1.98
LIG4-201ENST00000356922 PRSS29PA6NIE9 313 aa2.69□□□□□ -1.98
LIG4-201ENST00000356922 TM2D2Q9BX73 214 aa2.69□□□□□ -1.98
LIG4-201ENST00000356922 FAT1Q14517 4588 aa2.69□□□□□ -1.98
LIG4-201ENST00000356922 TRAV8-3A0A0A6YYJ7 113 aa2.69□□□□□ -1.98
LIG4-201ENST00000356922 IGIPA6NJ69 53 aa2.69□□□□□ -1.98
LIG4-201ENST00000356922 HSD52Q0P140 79 aa2.69□□□□□ -1.98
LIG4-201ENST00000356922 WFDC2Q14508 124 aa2.69□□□□□ -1.98
LIG4-201ENST00000356922 Q6ZRN7 208 aaPredicted RBP2.69□□□□□ -1.98
LIG4-201ENST00000356922 SMIM20Q8N5G0 67 aa2.69□□□□□ -1.98
LIG4-201ENST00000356922 RTL8CO15255 209 aa2.69□□□□□ -1.98
LIG4-201ENST00000356922 LEPROTL1O95214 131 aa2.69□□□□□ -1.98
LIG4-201ENST00000356922 HBDP02042 147 aa2.69□□□□□ -1.98
LIG4-201ENST00000356922 REG3AQ06141 175 aa2.69□□□□□ -1.98
LIG4-201ENST00000356922 Q0VG73 95 aa2.69□□□□□ -1.98
LIG4-201ENST00000356922 LINC01556Q5JQF7 62 aa2.69□□□□□ -1.98
LIG4-201ENST00000356922 KRTAP26-1Q6PEX3 210 aa2.69□□□□□ -1.98
LIG4-201ENST00000356922 Q6ZUT4 128 aa2.69□□□□□ -1.98
LIG4-201ENST00000356922 CDC42SE2Q9NRR3 84 aa2.69□□□□□ -1.98
LIG4-201ENST00000356922 TOMM7Q9P0U1 55 aa2.69□□□□□ -1.98
LIG4-201ENST00000356922 LECT2O14960 151 aa2.68□□□□□ -1.98
LIG4-201ENST00000356922 APOBP04114 4563 aaKnown RBP2.68□□□□□ -1.98
LIG4-201ENST00000356922 GAGE12HA6NDE8 117 aa2.68□□□□□ -1.98
LIG4-201ENST00000356922 SPATA12Q7Z6I5 190 aa2.68□□□□□ -1.98
LIG4-201ENST00000356922 NFE4Q86UQ8 179 aa2.68□□□□□ -1.98
LIG4-201ENST00000356922 PRR34Q9NV39 138 aa2.68□□□□□ -1.98
LIG4-201ENST00000356922 HSPB8Q9UJY1 196 aa2.68□□□□□ -1.98
LIG4-201ENST00000356922 IGLV4-3A0A075B6K6 122 aa2.68□□□□□ -1.98
LIG4-201ENST00000356922 A0A1B0GUV1 79 aa2.68□□□□□ -1.98
LIG4-201ENST00000356922 ATP5LO75964 103 aa2.68□□□□□ -1.98
LIG4-201ENST00000356922 PRSS2P07478 247 aa2.68□□□□□ -1.98
LIG4-201ENST00000356922 COX6A2Q02221 97 aa2.68□□□□□ -1.98
LIG4-201ENST00000356922 MAP1LC3CQ9BXW4 147 aa2.68□□□□□ -1.98
LIG4-201ENST00000356922 A4D1N5 150 aa2.68□□□□□ -1.98
LIG4-201ENST00000356922 IBA57-AS1B1ANH7 110 aa2.68□□□□□ -1.98
LIG4-201ENST00000356922 TMEM170BQ5T4T1 132 aa2.68□□□□□ -1.98
LIG4-201ENST00000356922 TOMM6Q96B49 74 aa2.68□□□□□ -1.98
LIG4-201ENST00000356922 CHCHD1Q96BP2 118 aaKnown RBP2.68□□□□□ -1.98
LIG4-201ENST00000356922 TMEM141Q96I45 108 aa2.68□□□□□ -1.98
LIG4-201ENST00000356922 SRRM2Q9UQ35 2752 aaKnown RBP2.67□□□□□ -1.98
LIG4-201ENST00000356922 LINC01549A6NIU2 74 aa2.67□□□□□ -1.98
LIG4-201ENST00000356922 ZNF561-AS1K7EIQ3 104 aa2.67□□□□□ -1.98
LIG4-201ENST00000356922 TAX1BP3O14907 124 aa2.67□□□□□ -1.98
LIG4-201ENST00000356922 C5orf38Q86SI9 138 aa2.67□□□□□ -1.98
LIG4-201ENST00000356922 SPANXA1Q9NS26 97 aa2.67□□□□□ -1.98
LIG4-201ENST00000356922 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.67□□□□□ -1.98
LIG4-201ENST00000356922 K7EMI3 77 aa2.67□□□□□ -1.98
LIG4-201ENST00000356922 C6orf223Q8N319 242 aa2.67□□□□□ -1.98
LIG4-201ENST00000356922 ANAPC13Q9BS18 74 aa2.67□□□□□ -1.98
LIG4-201ENST00000356922 H7C423 109 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms