RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 BATFQ16520 125 aa14.03□□□□□ -0.16
TRIM4-202ENST00000354241 MYMXA0A1B0GTQ4 84 aa14.02□□□□□ -0.16
TRIM4-202ENST00000354241 J3QQQ9 107 aa14.02□□□□□ -0.16
TRIM4-202ENST00000354241 IGHV3-30P01768 117 aa14.02□□□□□ -0.16
TRIM4-202ENST00000354241 IGHV3-33P01772 117 aa14.02□□□□□ -0.16
TRIM4-202ENST00000354241 IGHV3-30-3P0DP02 117 aa14.02□□□□□ -0.16
TRIM4-202ENST00000354241 IGHV3-30-5P0DP03 117 aa14.02□□□□□ -0.16
TRIM4-202ENST00000354241 LGALS3P17931 250 aaKnown RBP14.02□□□□□ -0.16
TRIM4-202ENST00000354241 ZNF815PA8K554 130 aa14.02□□□□□ -0.17
TRIM4-202ENST00000354241 SS18Q15532 418 aa14.02□□□□□ -0.17
TRIM4-202ENST00000354241 IGHV1-58A0A0C4DH39 117 aa14.01□□□□□ -0.17
TRIM4-202ENST00000354241 REG3AQ06141 175 aa14.01□□□□□ -0.17
TRIM4-202ENST00000354241 PLEKHB2Q96CS7 222 aa14.01□□□□□ -0.17
TRIM4-202ENST00000354241 SIVA1O15304 175 aa14□□□□□ -0.17
TRIM4-202ENST00000354241 KLK12Q9UKR0 248 aa14□□□□□ -0.17
TRIM4-202ENST00000354241 PRKDCP78527 4128 aaKnown RBP13.98□□□□□ -0.17
TRIM4-202ENST00000354241 CCL25O15444 150 aa13.98□□□□□ -0.17
TRIM4-202ENST00000354241 XCL1P47992 114 aa13.98□□□□□ -0.17
TRIM4-202ENST00000354241 SMIM1B2RUZ4 78 aa13.97□□□□□ -0.17
TRIM4-202ENST00000354241 IGLV10-54A0A075B6I4 117 aa13.96□□□□□ -0.18
TRIM4-202ENST00000354241 IGHV3OR16-9A0A0B4J2B5 98 aa13.96□□□□□ -0.18
TRIM4-202ENST00000354241 HINT1P49773 126 aaPredicted RBP13.96□□□□□ -0.18
TRIM4-202ENST00000354241 LINC00588Q9Y4M8 146 aa13.96□□□□□ -0.18
TRIM4-202ENST00000354241 STAB2Q8WWQ8 2551 aa13.95□□□□□ -0.18
TRIM4-202ENST00000354241 CCL18P55774 89 aa13.95□□□□□ -0.18
TRIM4-202ENST00000354241 SCGB1D4Q6XE38 83 aa13.95□□□□□ -0.18
TRIM4-202ENST00000354241 C5orf38Q86SI9 138 aa13.95□□□□□ -0.18
TRIM4-202ENST00000354241 HIGD1BQ9P298 99 aa13.95□□□□□ -0.18
TRIM4-202ENST00000354241 ORAOV1Q8WV07 137 aa13.94□□□□□ -0.18
TRIM4-202ENST00000354241 IGLV5-39A0A0G2JS06 123 aa13.94□□□□□ -0.18
TRIM4-202ENST00000354241 CRPP02741 224 aa13.94□□□□□ -0.18
TRIM4-202ENST00000354241 CHCHD10Q8WYQ3 142 aaPredicted RBP13.94□□□□□ -0.18
TRIM4-202ENST00000354241 PRR34Q9NV39 138 aa13.94□□□□□ -0.18
TRIM4-202ENST00000354241 MEGF8Q7Z7M0 2845 aa13.93□□□□□ -0.18
TRIM4-202ENST00000354241 ENHOQ6UWT2 76 aa13.92□□□□□ -0.18
TRIM4-202ENST00000354241 UBE2WQ96B02 151 aa13.92□□□□□ -0.18
TRIM4-202ENST00000354241 A0A087WZ39 114 aa13.92□□□□□ -0.18
TRIM4-202ENST00000354241 LINC01556Q5JQF7 62 aa13.92□□□□□ -0.18
TRIM4-202ENST00000354241 NDUFA12Q9UI09 145 aa13.91□□□□□ -0.18
TRIM4-202ENST00000354241 HSD52Q0P140 79 aa13.9□□□□□ -0.18
TRIM4-202ENST00000354241 ZFAND6Q6FIF0 208 aa13.9□□□□□ -0.18
TRIM4-202ENST00000354241 CD164L2Q6UWJ8 174 aa13.9□□□□□ -0.18
TRIM4-202ENST00000354241 NUPR2A6NF83 97 aa13.88□□□□□ -0.19
TRIM4-202ENST00000354241 DNAH10OSP0CZ25 163 aa13.88□□□□□ -0.19
TRIM4-202ENST00000354241 C10orf126Q8N4M7 172 aa13.88□□□□□ -0.19
TRIM4-202ENST00000354241 TOMM7Q9P0U1 55 aa13.88□□□□□ -0.19
TRIM4-202ENST00000354241 APLNQ9ULZ1 77 aa13.88□□□□□ -0.19
TRIM4-202ENST00000354241 COX11Q9Y6N1 276 aa13.88□□□□□ -0.19
TRIM4-202ENST00000354241 BVES-AS1Q5T3Y7 98 aa13.88□□□□□ -0.19
TRIM4-202ENST00000354241 GAGE12HA6NDE8 117 aa13.87□□□□□ -0.19
TRIM4-202ENST00000354241 COX7B2Q8TF08 81 aa13.87□□□□□ -0.19
TRIM4-202ENST00000354241 COX7A2LO14548 114 aa13.86□□□□□ -0.19
TRIM4-202ENST00000354241 HIST1H4GQ99525 98 aa13.86□□□□□ -0.19
TRIM4-202ENST00000354241 KLK5Q9Y337 293 aaPredicted RBP13.86□□□□□ -0.19
TRIM4-202ENST00000354241 A0A0J9YXY3 114 aa13.86□□□□□ -0.19
TRIM4-202ENST00000354241 FOXI1Q12951 378 aa13.86□□□□□ -0.19
TRIM4-202ENST00000354241 MIAQ16674 131 aa13.86□□□□□ -0.19
TRIM4-202ENST00000354241 TRAV8-4A0A0B4J246 113 aa13.85□□□□□ -0.19
TRIM4-202ENST00000354241 NDUFA1O15239 70 aa13.85□□□□□ -0.19
TRIM4-202ENST00000354241 Q9H8V8 135 aa13.85□□□□□ -0.19
TRIM4-202ENST00000354241 MALP21145 153 aa13.84□□□□□ -0.19
TRIM4-202ENST00000354241 GCSHP23434 173 aa13.84□□□□□ -0.19
TRIM4-202ENST00000354241 LINC01561Q8N1V8 128 aa13.84□□□□□ -0.19
TRIM4-202ENST00000354241 UPK3BQ9BT76 320 aa13.84□□□□□ -0.19
TRIM4-202ENST00000354241 SRSF9Q13242 221 aaKnown RBP eCLIP13.83□□□□□ -0.2
TRIM4-202ENST00000354241 TAL2Q16559 108 aa13.83□□□□□ -0.2
TRIM4-202ENST00000354241 UBE2DNLQ8IWF7 75 aa13.82□□□□□ -0.2
TRIM4-202ENST00000354241 UBE2V1Q13404 147 aa13.82□□□□□ -0.2
TRIM4-202ENST00000354241 CEND1Q8N111 149 aa13.82□□□□□ -0.2
TRIM4-202ENST00000354241 ZNF625Q96I27 306 aaPredicted RBP13.81□□□□□ -0.2
TRIM4-202ENST00000354241 SPANXB1Q9NS25 103 aaPredicted RBP13.8□□□□□ -0.2
TRIM4-202ENST00000354241 DYNC2H1Q8NCM8 4307 aaKnown RBP13.8□□□□□ -0.2
TRIM4-202ENST00000354241 TMEM238C9JI98 176 aa13.8□□□□□ -0.2
TRIM4-202ENST00000354241 PRSS2P07478 247 aa13.8□□□□□ -0.2
TRIM4-202ENST00000354241 PTTG1IPP53801 180 aa13.79□□□□□ -0.2
TRIM4-202ENST00000354241 Q9HAA7 133 aa13.79□□□□□ -0.2
TRIM4-202ENST00000354241 FXYD2P54710 66 aa13.78□□□□□ -0.2
TRIM4-202ENST00000354241 C6orf226Q5I0X4 101 aa13.78□□□□□ -0.2
TRIM4-202ENST00000354241 C1orf43Q9BWL3 253 aa13.78□□□□□ -0.2
TRIM4-202ENST00000354241 HERV-K104P63124 156 aa13.78□□□□□ -0.2
TRIM4-202ENST00000354241 Q8IZM0 81 aa13.78□□□□□ -0.2
TRIM4-202ENST00000354241 IGKV2D-24A0A075B6R9 120 aa13.77□□□□□ -0.21
TRIM4-202ENST00000354241 TM2D2Q9BX73 214 aa13.77□□□□□ -0.21
TRIM4-202ENST00000354241 IBA57-AS1B1ANH7 110 aa13.76□□□□□ -0.21
TRIM4-202ENST00000354241 K7EP13 123 aa13.76□□□□□ -0.21
TRIM4-202ENST00000354241 APOMO95445 188 aa13.76□□□□□ -0.21
TRIM4-202ENST00000354241 MEIG1Q5JSS6 88 aa13.76□□□□□ -0.21
TRIM4-202ENST00000354241 LITAFQ99732 161 aa13.76□□□□□ -0.21
TRIM4-202ENST00000354241 TAX1BP3O14907 124 aa13.76□□□□□ -0.21
TRIM4-202ENST00000354241 KRTAP26-1Q6PEX3 210 aa13.76□□□□□ -0.21
TRIM4-202ENST00000354241 Q6ZVH6 145 aa13.76□□□□□ -0.21
TRIM4-202ENST00000354241 CFAP161Q6P656 301 aa13.75□□□□□ -0.21
TRIM4-202ENST00000354241 DNAH7Q8WXX0 4024 aa13.74□□□□□ -0.21
TRIM4-202ENST00000354241 TIMM17BO60830 172 aa13.74□□□□□ -0.21
TRIM4-202ENST00000354241 CIRBPQ14011 172 aaKnown RBP13.74□□□□□ -0.21
TRIM4-202ENST00000354241 ADAMTSL4-AS1Q5T5F5 129 aa13.74□□□□□ -0.21
TRIM4-202ENST00000354241 A0A0U1RRA0 63 aa13.74□□□□□ -0.21
TRIM4-202ENST00000354241 A6NDN8 102 aa13.74□□□□□ -0.21
TRIM4-202ENST00000354241 CSMD3Q7Z407 3707 aa13.74□□□□□ -0.21
TRIM4-202ENST00000354241 KIAA0087Q14695 138 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms