RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 CLEC2BQ92478 149 aa12.87□□□□□ -0.35
APP-203ENST00000354192 COL6A5A8TX70 2615 aa12.87□□□□□ -0.35
APP-203ENST00000354192 SMCPP49901 116 aaPredicted RBP12.87□□□□□ -0.35
APP-203ENST00000354192 LYRM7Q5U5X0 104 aa12.87□□□□□ -0.35
APP-203ENST00000354192 PFN2P35080 140 aa12.86□□□□□ -0.35
APP-203ENST00000354192 CIRBPQ14011 172 aaKnown RBP12.86□□□□□ -0.35
APP-203ENST00000354192 HERVK_113P63121 156 aa12.86□□□□□ -0.35
APP-203ENST00000354192 NBEAL1Q6ZS30 2694 aa12.86□□□□□ -0.35
APP-203ENST00000354192 IGLV10-54A0A075B6I4 117 aa12.85□□□□□ -0.35
APP-203ENST00000354192 XCL1P47992 114 aa12.85□□□□□ -0.35
APP-203ENST00000354192 PIK3CD-AS1Q5SR53 167 aa12.85□□□□□ -0.35
APP-203ENST00000354192 RPL13AP40429 203 aaKnown RBP12.85□□□□□ -0.35
APP-203ENST00000354192 CDC42SE2Q9NRR3 84 aa12.85□□□□□ -0.35
APP-203ENST00000354192 TRBV10-1A0A0K0K1A3 114 aa12.84□□□□□ -0.35
APP-203ENST00000354192 FAM222AQ5U5X8 452 aa12.84□□□□□ -0.35
APP-203ENST00000354192 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.84□□□□□ -0.35
APP-203ENST00000354192 TRIAP1O43715 76 aa12.83□□□□□ -0.35
APP-203ENST00000354192 PRO0461Q9UI25 63 aa12.83□□□□□ -0.35
APP-203ENST00000354192 CMC4P56277 68 aaPredicted RBP12.83□□□□□ -0.36
APP-203ENST00000354192 CSNK1G2-AS1Q8NCQ2 148 aa12.83□□□□□ -0.36
APP-203ENST00000354192 FBN1P35555 2871 aaKnown RBP12.83□□□□□ -0.36
APP-203ENST00000354192 FHL2Q14192 279 aa12.83□□□□□ -0.36
APP-203ENST00000354192 ZFAND6Q6FIF0 208 aa12.82□□□□□ -0.36
APP-203ENST00000354192 SMIM1B2RUZ4 78 aa12.82□□□□□ -0.36
APP-203ENST00000354192 SLC25A20O43772 301 aa12.82□□□□□ -0.36
APP-203ENST00000354192 LITAFQ99732 161 aa12.82□□□□□ -0.36
APP-203ENST00000354192 LINC00158P58513 81 aa12.81□□□□□ -0.36
APP-203ENST00000354192 MIAQ16674 131 aa12.81□□□□□ -0.36
APP-203ENST00000354192 EDA2RQ9HAV5 297 aa12.81□□□□□ -0.36
APP-203ENST00000354192 GAGE12HA6NDE8 117 aa12.81□□□□□ -0.36
APP-203ENST00000354192 Q8N3U1 123 aa12.81□□□□□ -0.36
APP-203ENST00000354192 ANKRD29Q8N6D5 301 aa12.81□□□□□ -0.36
APP-203ENST00000354192 BAHCC1Q9P281 2608 aa12.8□□□□□ -0.36
APP-203ENST00000354192 IL17DQ8TAD2 202 aa12.8□□□□□ -0.36
APP-203ENST00000354192 TRBV6-8A0A0A6YYG3 113 aa12.79□□□□□ -0.36
APP-203ENST00000354192 F5H768 121 aa12.79□□□□□ -0.36
APP-203ENST00000354192 FOXI1Q12951 378 aa12.79□□□□□ -0.36
APP-203ENST00000354192 ATP6V0E2Q8NHE4 81 aa12.79□□□□□ -0.36
APP-203ENST00000354192 PKD1L1Q8TDX9 2849 aa12.78□□□□□ -0.36
APP-203ENST00000354192 NTN5Q8WTR8 489 aaPredicted RBP12.78□□□□□ -0.36
APP-203ENST00000354192 PAX4O43316 350 aa12.78□□□□□ -0.36
APP-203ENST00000354192 ICOSQ9Y6W8 199 aa12.78□□□□□ -0.36
APP-203ENST00000354192 A0A1B0GV72 72 aa12.77□□□□□ -0.36
APP-203ENST00000354192 COX6CP09669 75 aa12.77□□□□□ -0.36
APP-203ENST00000354192 TIRAPP58753 221 aa12.77□□□□□ -0.36
APP-203ENST00000354192 TRBV6-4A0A1B0GX49 114 aa12.77□□□□□ -0.37
APP-203ENST00000354192 CRYBA4P53673 196 aa12.77□□□□□ -0.37
APP-203ENST00000354192 CLUHP3Q96NS8 147 aa12.77□□□□□ -0.37
APP-203ENST00000354192 TRBV20-1A0A075B6N2 111 aa12.77□□□□□ -0.37
APP-203ENST00000354192 LINC00308Q8TCZ7 52 aa12.76□□□□□ -0.37
APP-203ENST00000354192 SIGMAR1Q99720 223 aa12.76□□□□□ -0.37
APP-203ENST00000354192 A0A0B4J2C4 111 aa12.75□□□□□ -0.37
APP-203ENST00000354192 NDUFA1O15239 70 aa12.75□□□□□ -0.37
APP-203ENST00000354192 DAD1P61803 113 aa12.75□□□□□ -0.37
APP-203ENST00000354192 C6orf226Q5I0X4 101 aa12.75□□□□□ -0.37
APP-203ENST00000354192 MIR7-3HGQ8N6C7 128 aa12.75□□□□□ -0.37
APP-203ENST00000354192 OR13C6PQ8NH95 151 aa12.75□□□□□ -0.37
APP-203ENST00000354192 ATXN8Q156A1 80 aa12.74□□□□□ -0.37
APP-203ENST00000354192 OXLD1Q5BKU9 147 aa12.74□□□□□ -0.37
APP-203ENST00000354192 SOSTDC1Q6X4U4 206 aa12.74□□□□□ -0.37
APP-203ENST00000354192 TRAV26-1A0A087WT03 109 aa12.74□□□□□ -0.37
APP-203ENST00000354192 TEX49A0A1B0GTD5 131 aa12.74□□□□□ -0.37
APP-203ENST00000354192 LINC01620Q4KN68 170 aa12.73□□□□□ -0.37
APP-203ENST00000354192 C2orf82Q6UX34 121 aa12.73□□□□□ -0.37
APP-203ENST00000354192 FAM110AQ9BQ89 295 aa12.73□□□□□ -0.37
APP-203ENST00000354192 ANGP03950 147 aaKnown RBP12.73□□□□□ -0.37
APP-203ENST00000354192 C9orf66Q5T8R8 295 aa12.73□□□□□ -0.37
APP-203ENST00000354192 TEN1Q86WV5 123 aa12.73□□□□□ -0.37
APP-203ENST00000354192 LINC00526Q96FQ7 95 aa12.73□□□□□ -0.37
APP-203ENST00000354192 CARD19Q96LW7 228 aa12.73□□□□□ -0.37
APP-203ENST00000354192 X6R8D5 127 aa12.72□□□□□ -0.37
APP-203ENST00000354192 COX7B2Q8TF08 81 aa12.72□□□□□ -0.37
APP-203ENST00000354192 OVOL2Q9BRP0 275 aa12.72□□□□□ -0.37
APP-203ENST00000354192 MGAM2Q2M2H8 2515 aa12.71□□□□□ -0.37
APP-203ENST00000354192 IGHV4-28A0A0C4DH34 117 aa12.71□□□□□ -0.37
APP-203ENST00000354192 SBSPONQ8IVN8 264 aa12.71□□□□□ -0.37
APP-203ENST00000354192 CELA1Q9UNI1 258 aa12.71□□□□□ -0.37
APP-203ENST00000354192 LINC00269Q8N2A0 174 aa12.71□□□□□ -0.37
APP-203ENST00000354192 SPANXDQ9BXN6 97 aa12.7□□□□□ -0.38
APP-203ENST00000354192 SPANXCQ9NY87 97 aa12.7□□□□□ -0.38
APP-203ENST00000354192 PPDPFLQ8WWR9 84 aa12.7□□□□□ -0.38
APP-203ENST00000354192 PRO0255Q9UI72 69 aa12.7□□□□□ -0.38
APP-203ENST00000354192 RETNQ9HD89 108 aa12.69□□□□□ -0.38
APP-203ENST00000354192 IGLV5-39A0A0G2JS06 123 aa12.68□□□□□ -0.38
APP-203ENST00000354192 IGLV5-45A0A087WSX0 123 aa12.67□□□□□ -0.38
APP-203ENST00000354192 TENM3Q9P273 2699 aa12.66□□□□□ -0.38
APP-203ENST00000354192 MT-ATP8P03928 68 aa12.66□□□□□ -0.38
APP-203ENST00000354192 LINC00959A0A1B0GUT2 108 aa12.66□□□□□ -0.38
APP-203ENST00000354192 CSDC2Q9Y534 153 aaKnown RBP12.66□□□□□ -0.38
APP-203ENST00000354192 Q9HAA7 133 aa12.65□□□□□ -0.38
APP-203ENST00000354192 SND1-IT1Q9HBX3 110 aa12.65□□□□□ -0.38
APP-203ENST00000354192 IGHV4-30-4P0DP06 118 aa12.65□□□□□ -0.39
APP-203ENST00000354192 SS18Q15532 418 aa12.65□□□□□ -0.39
APP-203ENST00000354192 MALP21145 153 aa12.64□□□□□ -0.39
APP-203ENST00000354192 TRBV30A0A0K0K1B3 111 aa12.64□□□□□ -0.39
APP-203ENST00000354192 IFITM1P13164 125 aa12.64□□□□□ -0.39
APP-203ENST00000354192 PRB2P02812 416 aaPredicted RBP12.63□□□□□ -0.39
APP-203ENST00000354192 PRR3P79522 188 aaKnown RBP12.63□□□□□ -0.39
APP-203ENST00000354192 C9orf116Q5BN46 136 aaPredicted RBP12.63□□□□□ -0.39
APP-203ENST00000354192 CRPP02741 224 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms