RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 LECT2O14960 151 aa13.08□□□□□ -0.32
CTSB-202ENST00000353047 SDIM1Q6ZPB5 146 aa13.08□□□□□ -0.32
CTSB-202ENST00000353047 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.07□□□□□ -0.32
CTSB-202ENST00000353047 ODF3Q96PU9 254 aa13.07□□□□□ -0.32
CTSB-202ENST00000353047 H3BT86 120 aa13.06□□□□□ -0.32
CTSB-202ENST00000353047 LST1O00453 97 aa13.06□□□□□ -0.32
CTSB-202ENST00000353047 LINC00242Q5T6M2 205 aa13.06□□□□□ -0.32
CTSB-202ENST00000353047 KRTAP10-9P60411 292 aa13.05□□□□□ -0.32
CTSB-202ENST00000353047 RPL32P62910 135 aaKnown RBP13.05□□□□□ -0.32
CTSB-202ENST00000353047 COPS9Q8WXC6 57 aa13.05□□□□□ -0.32
CTSB-202ENST00000353047 ATRQ13535 2644 aa13.05□□□□□ -0.32
CTSB-202ENST00000353047 K7EQD1 137 aa13.04□□□□□ -0.32
CTSB-202ENST00000353047 VPS13CQ709C8 3753 aa13.03□□□□□ -0.32
CTSB-202ENST00000353047 FLNBO75369 2602 aaKnown RBP13.03□□□□□ -0.32
CTSB-202ENST00000353047 KLK5Q9Y337 293 aaPredicted RBP13.03□□□□□ -0.32
CTSB-202ENST00000353047 CCL24O00175 119 aa13.02□□□□□ -0.32
CTSB-202ENST00000353047 ZNF702PQ9H963 129 aa13.02□□□□□ -0.33
CTSB-202ENST00000353047 NCR3O14931 201 aa13.01□□□□□ -0.33
CTSB-202ENST00000353047 MALP21145 153 aa13.01□□□□□ -0.33
CTSB-202ENST00000353047 DEFB114Q30KQ6 69 aa13.01□□□□□ -0.33
CTSB-202ENST00000353047 LINC00526Q96FQ7 95 aa13.01□□□□□ -0.33
CTSB-202ENST00000353047 COX7A2LO14548 114 aa13.01□□□□□ -0.33
CTSB-202ENST00000353047 PF4P02776 101 aa13.01□□□□□ -0.33
CTSB-202ENST00000353047 CITED2Q99967 270 aaPredicted RBP13.01□□□□□ -0.33
CTSB-202ENST00000353047 PYGO1Q9Y3Y4 419 aa13□□□□□ -0.33
CTSB-202ENST00000353047 PRR3P79522 188 aaKnown RBP13□□□□□ -0.33
CTSB-202ENST00000353047 COX7B2Q8TF08 81 aa12.99□□□□□ -0.33
CTSB-202ENST00000353047 UBR5O95071 2799 aaPredicted RBP12.99□□□□□ -0.33
CTSB-202ENST00000353047 NDUFA1O15239 70 aa12.99□□□□□ -0.33
CTSB-202ENST00000353047 SOSTDC1Q6X4U4 206 aa12.98□□□□□ -0.33
CTSB-202ENST00000353047 TMEM89A2RUT3 159 aa12.98□□□□□ -0.33
CTSB-202ENST00000353047 CFAP161Q6P656 301 aa12.98□□□□□ -0.33
CTSB-202ENST00000353047 A0A087WVE0 104 aa12.97□□□□□ -0.33
CTSB-202ENST00000353047 SMIM1B2RUZ4 78 aa12.97□□□□□ -0.33
CTSB-202ENST00000353047 TIRAPP58753 221 aa12.97□□□□□ -0.33
CTSB-202ENST00000353047 WFDC9Q8NEX5 89 aa12.97□□□□□ -0.33
CTSB-202ENST00000353047 ODF3L2Q3SX64 289 aa12.97□□□□□ -0.33
CTSB-202ENST00000353047 S100A7L2Q5SY68 101 aa12.97□□□□□ -0.33
CTSB-202ENST00000353047 LITAFQ99732 161 aa12.97□□□□□ -0.33
CTSB-202ENST00000353047 SPANXDQ9BXN6 97 aa12.97□□□□□ -0.33
CTSB-202ENST00000353047 SPANXCQ9NY87 97 aa12.97□□□□□ -0.33
CTSB-202ENST00000353047 TMEM86BQ8N661 226 aa12.97□□□□□ -0.33
CTSB-202ENST00000353047 NHLRC4P0CG21 123 aaPredicted RBP12.96□□□□□ -0.33
CTSB-202ENST00000353047 LAMTOR3Q9UHA4 124 aa12.96□□□□□ -0.34
CTSB-202ENST00000353047 CITED1Q99966 193 aa12.95□□□□□ -0.34
CTSB-202ENST00000353047 TRAV13-2A0A0B4J235 113 aa12.95□□□□□ -0.34
CTSB-202ENST00000353047 DSCR9P59020 149 aa12.95□□□□□ -0.34
CTSB-202ENST00000353047 A0A1B0GX51 115 aa12.95□□□□□ -0.34
CTSB-202ENST00000353047 INAFM2P0DMQ5 153 aa12.94□□□□□ -0.34
CTSB-202ENST00000353047 GYPEP15421 78 aa12.94□□□□□ -0.34
CTSB-202ENST00000353047 FAM218AQ96MZ4 157 aa12.94□□□□□ -0.34
CTSB-202ENST00000353047 IGLV4-60A0A075B6I1 120 aa12.94□□□□□ -0.34
CTSB-202ENST00000353047 ANGP03950 147 aaKnown RBP12.94□□□□□ -0.34
CTSB-202ENST00000353047 UNC79Q9P2D8 2635 aa12.94□□□□□ -0.34
CTSB-202ENST00000353047 C1orf158Q8N1D5 194 aa12.93□□□□□ -0.34
CTSB-202ENST00000353047 SBSPONQ8IVN8 264 aa12.93□□□□□ -0.34
CTSB-202ENST00000353047 DNAJC30Q96LL9 226 aa12.93□□□□□ -0.34
CTSB-202ENST00000353047 Q6YL49 198 aa12.92□□□□□ -0.34
CTSB-202ENST00000353047 NTM-AS1Q6ZSK4 140 aa12.92□□□□□ -0.34
CTSB-202ENST00000353047 A0A087WYN8 130 aa12.92□□□□□ -0.34
CTSB-202ENST00000353047 hADV29S1A0JD25 119 aa12.92□□□□□ -0.34
CTSB-202ENST00000353047 SETXQ7Z333 2677 aaKnown RBP12.91□□□□□ -0.34
CTSB-202ENST00000353047 IGHV4-31P0DP07 118 aa12.91□□□□□ -0.34
CTSB-202ENST00000353047 HAMPP81172 84 aa12.91□□□□□ -0.34
CTSB-202ENST00000353047 SMIM11BQ8TCY0 68 aa12.91□□□□□ -0.34
CTSB-202ENST00000353047 CDC42SE2Q9NRR3 84 aa12.9□□□□□ -0.34
CTSB-202ENST00000353047 SS18Q15532 418 aa12.88□□□□□ -0.35
CTSB-202ENST00000353047 SHISA2Q6UWI4 295 aa12.88□□□□□ -0.35
CTSB-202ENST00000353047 C9orf116Q5BN46 136 aaPredicted RBP12.88□□□□□ -0.35
CTSB-202ENST00000353047 LINC00337Q8N6G1 96 aa12.88□□□□□ -0.35
CTSB-202ENST00000353047 HELZ2Q9BYK8 2649 aaKnown RBP12.88□□□□□ -0.35
CTSB-202ENST00000353047 TRAV23DV6A0A075B6W5 121 aa12.88□□□□□ -0.35
CTSB-202ENST00000353047 LOC107984640A0A0U1RRK4 108 aa12.88□□□□□ -0.35
CTSB-202ENST00000353047 LINC00643Q86TS7 51 aa12.88□□□□□ -0.35
CTSB-202ENST00000353047 CCL18P55774 89 aa12.87□□□□□ -0.35
CTSB-202ENST00000353047 C11orf72Q8NBR9 251 aa12.87□□□□□ -0.35
CTSB-202ENST00000353047 APCP25054 2843 aa12.87□□□□□ -0.35
CTSB-202ENST00000353047 C4orf3Q8WVX3 66 aa12.86□□□□□ -0.35
CTSB-202ENST00000353047 A8MTW9 85 aa12.86□□□□□ -0.35
CTSB-202ENST00000353047 PRORYQ9H606 182 aa12.86□□□□□ -0.35
CTSB-202ENST00000353047 F5H768 121 aa12.86□□□□□ -0.35
CTSB-202ENST00000353047 J3QLI3 93 aa12.86□□□□□ -0.35
CTSB-202ENST00000353047 LINC00269Q8N2A0 174 aa12.85□□□□□ -0.35
CTSB-202ENST00000353047 LINC00482Q8N8I6 264 aa12.85□□□□□ -0.35
CTSB-202ENST00000353047 TEP1Q99973 2627 aaKnown RBP12.85□□□□□ -0.35
CTSB-202ENST00000353047 DNAJC9-AS1A6NH13 148 aa12.85□□□□□ -0.35
CTSB-202ENST00000353047 ITPR2Q14571 2701 aa12.85□□□□□ -0.35
CTSB-202ENST00000353047 TMEM126AQ9H061 195 aa12.84□□□□□ -0.35
CTSB-202ENST00000353047 SMCR5Q8TEV8 140 aa12.83□□□□□ -0.36
CTSB-202ENST00000353047 FAM104AQ969W3 186 aa12.83□□□□□ -0.36
CTSB-202ENST00000353047 DEFB135Q30KP9 77 aa12.82□□□□□ -0.36
CTSB-202ENST00000353047 DEFB113Q30KQ7 82 aa12.82□□□□□ -0.36
CTSB-202ENST00000353047 ORMDL1Q9P0S3 153 aa12.82□□□□□ -0.36
CTSB-202ENST00000353047 KLK9Q2XQG4 91 aa12.82□□□□□ -0.36
CTSB-202ENST00000353047 CXCL5P42830 114 aa12.82□□□□□ -0.36
CTSB-202ENST00000353047 ACYP1P07311 99 aa12.81□□□□□ -0.36
CTSB-202ENST00000353047 PPDPFQ9H3Y8 114 aa12.8□□□□□ -0.36
CTSB-202ENST00000353047 SCXQ7RTU7 201 aa12.8□□□□□ -0.36
CTSB-202ENST00000353047 TRBV10-1A0A0K0K1A3 114 aa12.8□□□□□ -0.36
CTSB-202ENST00000353047 TRBV6-8A0A0A6YYG3 113 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms