RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 CLEC2BQ92478 149 aa15.62■□□□□ 0.09
NKX2-4-201ENST00000351817 ZNF625Q96I27 306 aaPredicted RBP15.62■□□□□ 0.09
NKX2-4-201ENST00000351817 F5H768 121 aa15.62■□□□□ 0.09
NKX2-4-201ENST00000351817 RNASE1P07998 156 aaKnown RBP15.62■□□□□ 0.09
NKX2-4-201ENST00000351817 TRGV2A0A075B6R0 118 aa15.61■□□□□ 0.09
NKX2-4-201ENST00000351817 CKS1BP61024 79 aa15.61■□□□□ 0.09
NKX2-4-201ENST00000351817 GAGE7O76087 117 aa15.6■□□□□ 0.09
NKX2-4-201ENST00000351817 IGLV1-51P01701 117 aa15.6■□□□□ 0.09
NKX2-4-201ENST00000351817 GAGE12FP0CL80 117 aa15.6■□□□□ 0.09
NKX2-4-201ENST00000351817 GAGE12GP0CL81 117 aa15.6■□□□□ 0.09
NKX2-4-201ENST00000351817 GAGE12IP0CL82 117 aa15.6■□□□□ 0.09
NKX2-4-201ENST00000351817 PRIMA1Q86XR5 153 aa15.6■□□□□ 0.09
NKX2-4-201ENST00000351817 UBE2WQ96B02 151 aa15.6■□□□□ 0.09
NKX2-4-201ENST00000351817 RPL35AP18077 110 aaKnown RBP15.6■□□□□ 0.09
NKX2-4-201ENST00000351817 WFDC10AQ9H1F0 79 aa15.6■□□□□ 0.09
NKX2-4-201ENST00000351817 C19orf73Q9NVV2 129 aa15.6■□□□□ 0.09
NKX2-4-201ENST00000351817 TEX49A0A1B0GTD5 131 aa15.59■□□□□ 0.09
NKX2-4-201ENST00000351817 TRBV6-4A0A1B0GX49 114 aa15.59■□□□□ 0.09
NKX2-4-201ENST00000351817 HERV-K104P63124 156 aa15.59■□□□□ 0.09
NKX2-4-201ENST00000351817 OVOL2Q9BRP0 275 aa15.59■□□□□ 0.09
NKX2-4-201ENST00000351817 A0A0U1RRA0 63 aa15.58■□□□□ 0.08
NKX2-4-201ENST00000351817 MEIG1Q5JSS6 88 aa15.58■□□□□ 0.08
NKX2-4-201ENST00000351817 SMR3AQ99954 134 aa15.58■□□□□ 0.08
NKX2-4-201ENST00000351817 CSNK1G2-AS1Q8NCQ2 148 aa15.57■□□□□ 0.08
NKX2-4-201ENST00000351817 SOSTDC1Q6X4U4 206 aa15.56■□□□□ 0.08
NKX2-4-201ENST00000351817 FASNP49327 2511 aaKnown RBP15.56■□□□□ 0.08
NKX2-4-201ENST00000351817 LOC100131303A0A0U1RQF7 123 aa15.56■□□□□ 0.08
NKX2-4-201ENST00000351817 GCN1Q92616 2671 aaKnown RBP15.56■□□□□ 0.08
NKX2-4-201ENST00000351817 TRGV4A0A0C4DH28 118 aa15.55■□□□□ 0.08
NKX2-4-201ENST00000351817 MTORP42345 2549 aa15.55■□□□□ 0.08
NKX2-4-201ENST00000351817 TRAV8-4A0A0B4J246 113 aa15.55■□□□□ 0.08
NKX2-4-201ENST00000351817 PPDPFQ9H3Y8 114 aa15.54■□□□□ 0.08
NKX2-4-201ENST00000351817 HILS1P60008 231 aa15.53■□□□□ 0.08
NKX2-4-201ENST00000351817 COX7A2LO14548 114 aa15.51■□□□□ 0.07
NKX2-4-201ENST00000351817 SHISA2Q6UWI4 295 aa15.51■□□□□ 0.07
NKX2-4-201ENST00000351817 CITED1Q99966 193 aa15.51■□□□□ 0.07
NKX2-4-201ENST00000351817 GAGE6Q13070 117 aa15.5■□□□□ 0.07
NKX2-4-201ENST00000351817 FHL2Q14192 279 aa15.49■□□□□ 0.07
NKX2-4-201ENST00000351817 SNCGO76070 127 aa15.48■□□□□ 0.07
NKX2-4-201ENST00000351817 DEFB121Q5J5C9 76 aa15.48■□□□□ 0.07
NKX2-4-201ENST00000351817 COX7B2Q8TF08 81 aa15.48■□□□□ 0.07
NKX2-4-201ENST00000351817 TRBV6-8A0A0A6YYG3 113 aa15.48■□□□□ 0.07
NKX2-4-201ENST00000351817 NOTCH3Q9UM47 2321 aa15.47■□□□□ 0.07
NKX2-4-201ENST00000351817 HECTD1Q9ULT8 2610 aa15.47■□□□□ 0.07
NKX2-4-201ENST00000351817 TRAV26-1A0A087WT03 109 aa15.47■□□□□ 0.07
NKX2-4-201ENST00000351817 SETD2Q9BYW2 2564 aaPredicted RBP15.46■□□□□ 0.07
NKX2-4-201ENST00000351817 LY6G6DO95868 133 aa15.45■□□□□ 0.06
NKX2-4-201ENST00000351817 IGLV4-60A0A075B6I1 120 aa15.45■□□□□ 0.06
NKX2-4-201ENST00000351817 SETXQ7Z333 2677 aaKnown RBP15.45■□□□□ 0.06
NKX2-4-201ENST00000351817 CHCHD5Q9BSY4 110 aa15.44■□□□□ 0.06
NKX2-4-201ENST00000351817 IGKV3OR2-268A0A0C4DH90 116 aa15.43■□□□□ 0.06
NKX2-4-201ENST00000351817 FAM240AA0A1B0GVK7 77 aa15.43■□□□□ 0.06
NKX2-4-201ENST00000351817 PF4P02776 101 aa15.43■□□□□ 0.06
NKX2-4-201ENST00000351817 GAGE2BQ13066 116 aa15.43■□□□□ 0.06
NKX2-4-201ENST00000351817 GAGE2EQ4V326 116 aa15.43■□□□□ 0.06
NKX2-4-201ENST00000351817 TOMM7Q9P0U1 55 aa15.43■□□□□ 0.06
NKX2-4-201ENST00000351817 GAGE2DQ9UEU5 116 aa15.43■□□□□ 0.06
NKX2-4-201ENST00000351817 HIVEP2P31629 2446 aa15.42■□□□□ 0.06
NKX2-4-201ENST00000351817 JMJD1CQ15652 2540 aa15.42■□□□□ 0.06
NKX2-4-201ENST00000351817 TRAV13-2A0A0B4J235 113 aa15.41■□□□□ 0.06
NKX2-4-201ENST00000351817 IGHV3OR16-9A0A0B4J2B5 98 aa15.41■□□□□ 0.06
NKX2-4-201ENST00000351817 CRLF1O75462 422 aa15.41■□□□□ 0.06
NKX2-4-201ENST00000351817 TRACP01848 142 aa15.41■□□□□ 0.06
NKX2-4-201ENST00000351817 FAM222AQ5U5X8 452 aa15.41■□□□□ 0.06
NKX2-4-201ENST00000351817 C15orf53Q8NAA6 179 aa15.41■□□□□ 0.06
NKX2-4-201ENST00000351817 MIR7-3HGQ8N6C7 128 aa15.41■□□□□ 0.06
NKX2-4-201ENST00000351817 KIR2DL5BQ8NHK3 375 aa15.41■□□□□ 0.06
NKX2-4-201ENST00000351817 MRPL23Q16540 153 aaKnown RBP15.4■□□□□ 0.06
NKX2-4-201ENST00000351817 C2CD3Q4AC94 2353 aa15.4■□□□□ 0.06
NKX2-4-201ENST00000351817 Q6Q795 121 aa15.39■□□□□ 0.05
NKX2-4-201ENST00000351817 A0A087WZ39 114 aa15.39■□□□□ 0.05
NKX2-4-201ENST00000351817 CRPP02741 224 aa15.39■□□□□ 0.05
NKX2-4-201ENST00000351817 KRTAP10-3P60369 221 aa15.39■□□□□ 0.05
NKX2-4-201ENST00000351817 ANAPC13Q9BS18 74 aa15.39■□□□□ 0.05
NKX2-4-201ENST00000351817 OTOGQ6ZRI0 2925 aa15.38■□□□□ 0.05
NKX2-4-201ENST00000351817 DEFB130BP0DP73 79 aa15.38■□□□□ 0.05
NKX2-4-201ENST00000351817 DEFB130AP0DP74 79 aa15.38■□□□□ 0.05
NKX2-4-201ENST00000351817 LINC00612Q8N6U2 182 aa15.37■□□□□ 0.05
NKX2-4-201ENST00000351817 NIPBLQ6KC79 2804 aaeCLIP15.37■□□□□ 0.05
NKX2-4-201ENST00000351817 RPL28P46779 137 aaKnown RBP15.37■□□□□ 0.05
NKX2-4-201ENST00000351817 SND1-IT1Q9HBX3 110 aa15.37■□□□□ 0.05
NKX2-4-201ENST00000351817 LINC00158P58513 81 aa15.36■□□□□ 0.05
NKX2-4-201ENST00000351817 IBA57-AS1B1ANH7 110 aa15.35■□□□□ 0.05
NKX2-4-201ENST00000351817 LINC00959A0A1B0GUT2 108 aa15.35■□□□□ 0.05
NKX2-4-201ENST00000351817 C5orf38Q86SI9 138 aa15.34■□□□□ 0.05
NKX2-4-201ENST00000351817 LINC00337Q8N6G1 96 aa15.34■□□□□ 0.05
NKX2-4-201ENST00000351817 IGKV2-28A0A075B6P5 120 aa15.33■□□□□ 0.05
NKX2-4-201ENST00000351817 IGKV2D-28P01615 120 aa15.33■□□□□ 0.05
NKX2-4-201ENST00000351817 GYPEP15421 78 aa15.33■□□□□ 0.05
NKX2-4-201ENST00000351817 FAM218AQ96MZ4 157 aa15.33■□□□□ 0.05
NKX2-4-201ENST00000351817 BAALC-AS2P0C853 105 aa15.33■□□□□ 0.04
NKX2-4-201ENST00000351817 LINC00482Q8N8I6 264 aa15.32■□□□□ 0.04
NKX2-4-201ENST00000351817 NOTCH2Q04721 2471 aa15.32■□□□□ 0.04
NKX2-4-201ENST00000351817 INAFM1C9JVW0 142 aa15.32■□□□□ 0.04
NKX2-4-201ENST00000351817 ACYP1P07311 99 aa15.32■□□□□ 0.04
NKX2-4-201ENST00000351817 TTC32Q5I0X7 151 aa15.32■□□□□ 0.04
NKX2-4-201ENST00000351817 CCL18P55774 89 aa15.31■□□□□ 0.04
NKX2-4-201ENST00000351817 NDUFV3P56181 108 aaKnown RBP15.31■□□□□ 0.04
NKX2-4-201ENST00000351817 A0A1B0GUV1 79 aa15.29■□□□□ 0.04
NKX2-4-201ENST00000351817 SMIM9A6NGZ8 99 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms