RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 TMEM243Q9BU79 118 aa10.95□□□□□ -0.66
PTBP1-201ENST00000349038 FHL2Q14192 279 aa10.95□□□□□ -0.66
PTBP1-201ENST00000349038 USMG5Q96IX5 58 aa10.95□□□□□ -0.66
PTBP1-201ENST00000349038 SND1-IT1Q9HBX3 110 aa10.95□□□□□ -0.66
PTBP1-201ENST00000349038 CHD6Q8TD26 2715 aa10.94□□□□□ -0.66
PTBP1-201ENST00000349038 RBMY1A1P0DJD3 496 aaKnown RBP10.94□□□□□ -0.66
PTBP1-201ENST00000349038 RBMY1CP0DJD4 496 aa10.94□□□□□ -0.66
PTBP1-201ENST00000349038 RBMY1FQ15415 496 aaKnown RBP10.94□□□□□ -0.66
PTBP1-201ENST00000349038 H3BUA1 57 aa10.94□□□□□ -0.66
PTBP1-201ENST00000349038 IGHV4-38-2P0DP08 117 aa10.94□□□□□ -0.66
PTBP1-201ENST00000349038 DEFB136Q30KP8 78 aa10.94□□□□□ -0.66
PTBP1-201ENST00000349038 CHCHD7Q9BUK0 85 aa10.94□□□□□ -0.66
PTBP1-201ENST00000349038 SNURFQ9Y675 71 aa10.94□□□□□ -0.66
PTBP1-201ENST00000349038 C5orf38Q86SI9 138 aa10.93□□□□□ -0.66
PTBP1-201ENST00000349038 PYGO1Q9Y3Y4 419 aa10.93□□□□□ -0.66
PTBP1-201ENST00000349038 ABCA2Q9BZC7 2435 aa10.93□□□□□ -0.66
PTBP1-201ENST00000349038 LINC01561Q8N1V8 128 aa10.93□□□□□ -0.66
PTBP1-201ENST00000349038 NDUFA1O15239 70 aa10.93□□□□□ -0.66
PTBP1-201ENST00000349038 LINC00337Q8N6G1 96 aa10.93□□□□□ -0.66
PTBP1-201ENST00000349038 LINC00242Q5T6M2 205 aa10.92□□□□□ -0.66
PTBP1-201ENST00000349038 HIST2H2BCQ6DN03 193 aa10.92□□□□□ -0.66
PTBP1-201ENST00000349038 SMIM11BQ8TCY0 68 aa10.92□□□□□ -0.66
PTBP1-201ENST00000349038 LINC01600Q96MT4 127 aa10.91□□□□□ -0.66
PTBP1-201ENST00000349038 XCL2Q9UBD3 114 aa10.91□□□□□ -0.66
PTBP1-201ENST00000349038 IGSF10Q6WRI0 2623 aa10.91□□□□□ -0.66
PTBP1-201ENST00000349038 TRGV1A0A0A0MS02 117 aa10.91□□□□□ -0.66
PTBP1-201ENST00000349038 C22orf24Q9Y442 160 aa10.91□□□□□ -0.66
PTBP1-201ENST00000349038 NIPBLQ6KC79 2804 aaeCLIP10.91□□□□□ -0.664e-6■■□□□ 12.3
PTBP1-201ENST00000349038 ABCA12Q86UK0 2595 aa10.9□□□□□ -0.66
PTBP1-201ENST00000349038 TMEM258P61165 79 aa10.9□□□□□ -0.66
PTBP1-201ENST00000349038 PRR3P79522 188 aaKnown RBP10.9□□□□□ -0.66
PTBP1-201ENST00000349038 BBC3Q96PG8 261 aaPredicted RBP10.89□□□□□ -0.67
PTBP1-201ENST00000349038 MYO18BQ8IUG5 2567 aa10.89□□□□□ -0.67
PTBP1-201ENST00000349038 RBMY1BA6NDE4 496 aaKnown RBP10.89□□□□□ -0.67
PTBP1-201ENST00000349038 RBMY1EA6NEQ0 496 aaKnown RBP10.89□□□□□ -0.67
PTBP1-201ENST00000349038 RBMY1DP0C7P1 496 aaKnown RBP10.89□□□□□ -0.67
PTBP1-201ENST00000349038 HAMPP81172 84 aa10.89□□□□□ -0.67
PTBP1-201ENST00000349038 LY6DQ14210 128 aa10.89□□□□□ -0.67
PTBP1-201ENST00000349038 MTORP42345 2549 aa10.88□□□□□ -0.67
PTBP1-201ENST00000349038 SMIM1B2RUZ4 78 aa10.88□□□□□ -0.67
PTBP1-201ENST00000349038 RPL28P46779 137 aaKnown RBP10.88□□□□□ -0.67
PTBP1-201ENST00000349038 K7EMT4 169 aa10.87□□□□□ -0.67
PTBP1-201ENST00000349038 UBE2L6O14933 153 aa10.87□□□□□ -0.67
PTBP1-201ENST00000349038 CLPSL2Q6UWE3 100 aa10.87□□□□□ -0.67
PTBP1-201ENST00000349038 IGLV1-40P01703 118 aa10.87□□□□□ -0.67
PTBP1-201ENST00000349038 RPL35AP18077 110 aaKnown RBP10.87□□□□□ -0.67
PTBP1-201ENST00000349038 C11orf44Q8N8P7 122 aa10.87□□□□□ -0.67
PTBP1-201ENST00000349038 C19orf84I3L1E1 186 aa10.86□□□□□ -0.67
PTBP1-201ENST00000349038 LINC00336Q6ZUF6 198 aa10.86□□□□□ -0.67
PTBP1-201ENST00000349038 A6NDX4 124 aa10.86□□□□□ -0.67
PTBP1-201ENST00000349038 SCXQ7RTU7 201 aa10.86□□□□□ -0.67
PTBP1-201ENST00000349038 BEAN1Q3B7T3 259 aa10.85□□□□□ -0.67
PTBP1-201ENST00000349038 MAPK1IP1LQ8NDC0 245 aa10.85□□□□□ -0.67
PTBP1-201ENST00000349038 Q6ZTI0 123 aa10.85□□□□□ -0.67
PTBP1-201ENST00000349038 HIVEP2P31629 2446 aa10.85□□□□□ -0.67
PTBP1-201ENST00000349038 ZNF843Q8N446 348 aa10.84□□□□□ -0.67
PTBP1-201ENST00000349038 Q96MF0 132 aa10.84□□□□□ -0.67
PTBP1-201ENST00000349038 NF1P21359 2839 aa10.84□□□□□ -0.67
PTBP1-201ENST00000349038 Q5XG85 94 aa10.84□□□□□ -0.67
PTBP1-201ENST00000349038 BRK1Q8WUW1 75 aa10.84□□□□□ -0.67
PTBP1-201ENST00000349038 TRAV13-2A0A0B4J235 113 aa10.83□□□□□ -0.68
PTBP1-201ENST00000349038 MPLKIPQ8TAP9 179 aa10.83□□□□□ -0.68
PTBP1-201ENST00000349038 RBM3P98179 157 aaKnown RBP10.82□□□□□ -0.68
PTBP1-201ENST00000349038 GCN1Q92616 2671 aaKnown RBP10.82□□□□□ -0.68
PTBP1-201ENST00000349038 IGKV2-28A0A075B6P5 120 aa10.81□□□□□ -0.68
PTBP1-201ENST00000349038 IGKV2D-28P01615 120 aa10.81□□□□□ -0.68
PTBP1-201ENST00000349038 F8P00451 2351 aa10.81□□□□□ -0.68
PTBP1-201ENST00000349038 COPS9Q8WXC6 57 aa10.81□□□□□ -0.68
PTBP1-201ENST00000349038 FAM236DA0A1B0GTK5 79 aa10.81□□□□□ -0.68
PTBP1-201ENST00000349038 A8MTW9 85 aa10.81□□□□□ -0.68
PTBP1-201ENST00000349038 TIMM17BO60830 172 aa10.81□□□□□ -0.68
PTBP1-201ENST00000349038 FAM236CP0DP71 79 aa10.81□□□□□ -0.68
PTBP1-201ENST00000349038 RPS28P62857 69 aaKnown RBP10.81□□□□□ -0.68
PTBP1-201ENST00000349038 MRAPQ8TCY5 172 aa10.81□□□□□ -0.68
PTBP1-201ENST00000349038 LOC100131303A0A0U1RQF7 123 aa10.8□□□□□ -0.68
PTBP1-201ENST00000349038 CCL18P55774 89 aa10.8□□□□□ -0.68
PTBP1-201ENST00000349038 ZNF415Q09FC8 603 aa10.8□□□□□ -0.68
PTBP1-201ENST00000349038 RMI2Q96E14 147 aa10.8□□□□□ -0.68
PTBP1-201ENST00000349038 K7EQG2 157 aa10.8□□□□□ -0.68
PTBP1-201ENST00000349038 SLURP1P55000 103 aa10.8□□□□□ -0.68
PTBP1-201ENST00000349038 UPK3BQ9BT76 320 aa10.8□□□□□ -0.68
PTBP1-201ENST00000349038 UTP20O75691 2785 aaKnown RBP10.8□□□□□ -0.68
PTBP1-201ENST00000349038 S100A7L2Q5SY68 101 aa10.79□□□□□ -0.68
PTBP1-201ENST00000349038 C18orf65Q6ZTR6 163 aa10.79□□□□□ -0.68
PTBP1-201ENST00000349038 PRB2P02812 416 aaPredicted RBP10.79□□□□□ -0.68
PTBP1-201ENST00000349038 ORMDL1Q9P0S3 153 aa10.79□□□□□ -0.68
PTBP1-201ENST00000349038 J3QLI3 93 aa10.78□□□□□ -0.68
PTBP1-201ENST00000349038 IGHV4-59P01825 116 aa10.78□□□□□ -0.68
PTBP1-201ENST00000349038 C6orf226Q5I0X4 101 aa10.78□□□□□ -0.68
PTBP1-201ENST00000349038 Q6JHZ5 121 aa10.78□□□□□ -0.68
PTBP1-201ENST00000349038 LINC00474Q9P2X8 69 aa10.78□□□□□ -0.68
PTBP1-201ENST00000349038 LAMTOR3Q9UHA4 124 aa10.78□□□□□ -0.68
PTBP1-201ENST00000349038 IGHV4-61A0A0C4DH41 118 aa10.78□□□□□ -0.68
PTBP1-201ENST00000349038 APCP25054 2843 aa10.77□□□□□ -0.68
PTBP1-201ENST00000349038 A0A096LPF7 62 aa10.77□□□□□ -0.68
PTBP1-201ENST00000349038 PSMB8P28062 276 aa10.77□□□□□ -0.68
PTBP1-201ENST00000349038 XCL1P47992 114 aa10.77□□□□□ -0.68
PTBP1-201ENST00000349038 PLA2G2AP14555 144 aa10.77□□□□□ -0.69
PTBP1-201ENST00000349038 COX7B2Q8TF08 81 aa10.77□□□□□ -0.69
PTBP1-201ENST00000349038 CFAP46Q8IYW2 2715 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms