RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 A0A087WZ39 114 aa3.47□□□□□ -1.85
CSMD3-203ENST00000343508 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.47□□□□□ -1.85
CSMD3-203ENST00000343508 ZFHX4Q86UP3 3567 aa3.47□□□□□ -1.85
CSMD3-203ENST00000343508 KLK12Q9UKR0 248 aa3.47□□□□□ -1.85
CSMD3-203ENST00000343508 MIFP14174 115 aa3.46□□□□□ -1.85
CSMD3-203ENST00000343508 LINC00959A0A1B0GUT2 108 aa3.46□□□□□ -1.86
CSMD3-203ENST00000343508 DEFB121Q5J5C9 76 aa3.46□□□□□ -1.86
CSMD3-203ENST00000343508 ABCA4P78363 2273 aa3.46□□□□□ -1.86
CSMD3-203ENST00000343508 CCL18P55774 89 aa3.46□□□□□ -1.86
CSMD3-203ENST00000343508 CXCL6P80162 114 aa3.46□□□□□ -1.86
CSMD3-203ENST00000343508 LINC00315P59091 139 aa3.46□□□□□ -1.86
CSMD3-203ENST00000343508 NTM-AS1Q6ZSK4 140 aa3.46□□□□□ -1.86
CSMD3-203ENST00000343508 BCE1O60756 84 aa3.45□□□□□ -1.86
CSMD3-203ENST00000343508 WFDC11Q8NEX6 87 aa3.45□□□□□ -1.86
CSMD3-203ENST00000343508 AKAP6Q13023 2319 aa3.45□□□□□ -1.86
CSMD3-203ENST00000343508 ZNF702PQ9H963 129 aa3.45□□□□□ -1.86
CSMD3-203ENST00000343508 IGLV5-45A0A087WSX0 123 aa3.45□□□□□ -1.86
CSMD3-203ENST00000343508 PRYO14603 147 aa3.45□□□□□ -1.86
CSMD3-203ENST00000343508 HRCT1Q6UXD1 115 aa3.45□□□□□ -1.86
CSMD3-203ENST00000343508 PRO3102Q9H379 93 aa3.45□□□□□ -1.86
CSMD3-203ENST00000343508 ACACAQ13085 2346 aa3.45□□□□□ -1.86
CSMD3-203ENST00000343508 ASPMQ8IZT6 3477 aa3.45□□□□□ -1.86
CSMD3-203ENST00000343508 PRB1P04280 392 aa3.45□□□□□ -1.86
CSMD3-203ENST00000343508 PRO0628Q9UI54 55 aa3.45□□□□□ -1.86
CSMD3-203ENST00000343508 UBE2DNLQ8IWF7 75 aa3.45□□□□□ -1.86
CSMD3-203ENST00000343508 Q6ZQY7 126 aa3.44□□□□□ -1.86
CSMD3-203ENST00000343508 LINC00846Q9NV44 126 aa3.44□□□□□ -1.86
CSMD3-203ENST00000343508 NDUFS5O43920 106 aa3.44□□□□□ -1.86
CSMD3-203ENST00000343508 A0A087WVE0 104 aa3.44□□□□□ -1.86
CSMD3-203ENST00000343508 BEAN1Q3B7T3 259 aa3.44□□□□□ -1.86
CSMD3-203ENST00000343508 IGLV5-39A0A0G2JS06 123 aa3.44□□□□□ -1.86
CSMD3-203ENST00000343508 FHL3Q13643 280 aa3.44□□□□□ -1.86
CSMD3-203ENST00000343508 MRPL55Q7Z7F7 128 aaKnown RBP3.44□□□□□ -1.86
CSMD3-203ENST00000343508 A0A1B0GUV1 79 aa3.44□□□□□ -1.86
CSMD3-203ENST00000343508 CACNA1BQ00975 2339 aa3.44□□□□□ -1.86
CSMD3-203ENST00000343508 C1orf195Q5TG92 126 aa3.44□□□□□ -1.86
CSMD3-203ENST00000343508 LINC01561Q8N1V8 128 aa3.44□□□□□ -1.86
CSMD3-203ENST00000343508 Q8N3U1 123 aa3.44□□□□□ -1.86
CSMD3-203ENST00000343508 SCXQ7RTU7 201 aa3.43□□□□□ -1.86
CSMD3-203ENST00000343508 COL6A6A6NMZ7 2263 aa3.43□□□□□ -1.86
CSMD3-203ENST00000343508 CUL9Q8IWT3 2517 aa3.43□□□□□ -1.86
CSMD3-203ENST00000343508 A0A0U1RQV1 116 aa3.43□□□□□ -1.86
CSMD3-203ENST00000343508 M0R378 163 aa3.43□□□□□ -1.86
CSMD3-203ENST00000343508 PTPRZ1P23471 2315 aaPredicted RBP3.43□□□□□ -1.86
CSMD3-203ENST00000343508 DNAJC9-AS1A6NH13 148 aa3.43□□□□□ -1.86
CSMD3-203ENST00000343508 LINC00337Q8N6G1 96 aa3.43□□□□□ -1.86
CSMD3-203ENST00000343508 C3orf84H3BNL1 204 aa3.43□□□□□ -1.86
CSMD3-203ENST00000343508 ESM1Q9NQ30 184 aa3.43□□□□□ -1.86
CSMD3-203ENST00000343508 KLK9Q2XQG4 91 aa3.43□□□□□ -1.86
CSMD3-203ENST00000343508 PRUNE2Q8WUY3 3088 aa3.43□□□□□ -1.86
CSMD3-203ENST00000343508 C10orf99Q6UWK7 81 aa3.43□□□□□ -1.86
CSMD3-203ENST00000343508 DEFB135Q30KP9 77 aa3.43□□□□□ -1.86
CSMD3-203ENST00000343508 DHRS4-AS1Q9P1J3 65 aa3.43□□□□□ -1.86
CSMD3-203ENST00000343508 ZNF73O43830 326 aaPredicted RBP3.43□□□□□ -1.86
CSMD3-203ENST00000343508 LOC100131303A0A0U1RQF7 123 aa3.42□□□□□ -1.86
CSMD3-203ENST00000343508 IGHV4-31P0DP07 118 aa3.42□□□□□ -1.86
CSMD3-203ENST00000343508 EDN2P20800 178 aa3.42□□□□□ -1.86
CSMD3-203ENST00000343508 LINC00575Q6W349 94 aa3.42□□□□□ -1.86
CSMD3-203ENST00000343508 LINC01547P58512 204 aaPredicted RBP3.42□□□□□ -1.86
CSMD3-203ENST00000343508 APC2O95996 2303 aa3.42□□□□□ -1.86
CSMD3-203ENST00000343508 LITAFQ99732 161 aa3.42□□□□□ -1.86
CSMD3-203ENST00000343508 TRBV7-6A0A0J9YX20 115 aa3.42□□□□□ -1.86
CSMD3-203ENST00000343508 PRM2P04554 102 aa3.42□□□□□ -1.86
CSMD3-203ENST00000343508 CHKB-CPT1BH3BT56 60 aa3.41□□□□□ -1.86
CSMD3-203ENST00000343508 Q6ZSN1 163 aa3.41□□□□□ -1.86
CSMD3-203ENST00000343508 XAGE1AQ9HD64 81 aa3.41□□□□□ -1.86
CSMD3-203ENST00000343508 C1orf158Q8N1D5 194 aa3.41□□□□□ -1.86
CSMD3-203ENST00000343508 KIR2DL5BQ8NHK3 375 aa3.41□□□□□ -1.86
CSMD3-203ENST00000343508 SPTA1P02549 2419 aa3.41□□□□□ -1.86
CSMD3-203ENST00000343508 C19orf84I3L1E1 186 aa3.41□□□□□ -1.86
CSMD3-203ENST00000343508 Q8N2B8 174 aa3.41□□□□□ -1.86
CSMD3-203ENST00000343508 LELP1Q5T871 98 aa3.41□□□□□ -1.86
CSMD3-203ENST00000343508 NHLRC4P0CG21 123 aaPredicted RBP3.41□□□□□ -1.86
CSMD3-203ENST00000343508 C18orf65Q6ZTR6 163 aa3.4□□□□□ -1.86
CSMD3-203ENST00000343508 NCOR1O75376 2440 aa3.4□□□□□ -1.86
CSMD3-203ENST00000343508 CNOT1A5YKK6 2376 aaKnown RBP3.4□□□□□ -1.86
CSMD3-203ENST00000343508 IGLV4-60A0A075B6I1 120 aa3.4□□□□□ -1.86
CSMD3-203ENST00000343508 H0Y9J4 135 aa3.4□□□□□ -1.86
CSMD3-203ENST00000343508 MUC4Q99102 2169 aa3.4□□□□□ -1.86
CSMD3-203ENST00000343508 CYSRT1A8MQ03 144 aa3.4□□□□□ -1.87
CSMD3-203ENST00000343508 CFAP54Q96N23 3096 aa3.4□□□□□ -1.87
CSMD3-203ENST00000343508 PRB2P02812 416 aaPredicted RBP3.4□□□□□ -1.87
CSMD3-203ENST00000343508 FHL2Q14192 279 aa3.4□□□□□ -1.87
CSMD3-203ENST00000343508 FAM19A1Q7Z5A9 133 aa3.4□□□□□ -1.87
CSMD3-203ENST00000343508 BBC3Q96PG8 261 aaPredicted RBP3.4□□□□□ -1.87
CSMD3-203ENST00000343508 IGKV2-28A0A075B6P5 120 aa3.4□□□□□ -1.87
CSMD3-203ENST00000343508 IGKV2D-28P01615 120 aa3.4□□□□□ -1.87
CSMD3-203ENST00000343508 PRR3P79522 188 aaKnown RBP3.4□□□□□ -1.87
CSMD3-203ENST00000343508 A0A1B0GW54 56 aa3.39□□□□□ -1.87
CSMD3-203ENST00000343508 CDSNQ15517 529 aa3.39□□□□□ -1.87
CSMD3-203ENST00000343508 C11orf72Q8NBR9 251 aa3.39□□□□□ -1.87
CSMD3-203ENST00000343508 SPTSSBQ8NFR3 76 aa3.39□□□□□ -1.87
CSMD3-203ENST00000343508 WFDC10BQ8IUB3 73 aa3.39□□□□□ -1.87
CSMD3-203ENST00000343508 FAM30AQ9NZY2 134 aa3.39□□□□□ -1.87
CSMD3-203ENST00000343508 F8WDY8 70 aa3.39□□□□□ -1.87
CSMD3-203ENST00000343508 Q6ZVQ6 151 aa3.39□□□□□ -1.87
CSMD3-203ENST00000343508 MED13LQ71F56 2210 aa3.39□□□□□ -1.87
CSMD3-203ENST00000343508 TMEM254Q8TBM7 123 aa3.39□□□□□ -1.87
CSMD3-203ENST00000343508 C4orf26Q17RF5 130 aa3.39□□□□□ -1.87
CSMD3-203ENST00000343508 ODF3L2Q3SX64 289 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms