RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 RPL36AP83881 106 aaKnown RBP10.61□□□□□ -0.71
CLCN1-201ENST00000343257 COPS9Q8WXC6 57 aa10.61□□□□□ -0.71
CLCN1-201ENST00000343257 RPL36ALQ969Q0 106 aaKnown RBP10.61□□□□□ -0.71
CLCN1-201ENST00000343257 CHD8Q9HCK8 2581 aa10.6□□□□□ -0.71
CLCN1-201ENST00000343257 NTM-AS1Q6ZSK4 140 aa10.6□□□□□ -0.71
CLCN1-201ENST00000343257 TRAV13-2A0A0B4J235 113 aa10.6□□□□□ -0.71
CLCN1-201ENST00000343257 PAX4O43316 350 aa10.59□□□□□ -0.71
CLCN1-201ENST00000343257 FAM222AQ5U5X8 452 aa10.59□□□□□ -0.71
CLCN1-201ENST00000343257 C10orf105Q8TEF2 133 aa10.59□□□□□ -0.71
CLCN1-201ENST00000343257 SERP2Q8N6R1 65 aa10.59□□□□□ -0.71
CLCN1-201ENST00000343257 JMJD1CQ15652 2540 aa10.59□□□□□ -0.71
CLCN1-201ENST00000343257 TRAV23DV6A0A075B6W5 121 aa10.59□□□□□ -0.71
CLCN1-201ENST00000343257 F5H768 121 aa10.59□□□□□ -0.71
CLCN1-201ENST00000343257 RPL28P46779 137 aaKnown RBP10.59□□□□□ -0.71
CLCN1-201ENST00000343257 MAPK1IP1LQ8NDC0 245 aa10.58□□□□□ -0.72
CLCN1-201ENST00000343257 IGHV4-30-2A0A087WSY4 118 aa10.58□□□□□ -0.72
CLCN1-201ENST00000343257 DEFB112Q30KQ8 113 aa10.58□□□□□ -0.72
CLCN1-201ENST00000343257 SETD2Q9BYW2 2564 aaPredicted RBP10.58□□□□□ -0.72
CLCN1-201ENST00000343257 POLQO75417 2590 aa10.57□□□□□ -0.72
CLCN1-201ENST00000343257 C11orf72Q8NBR9 251 aa10.57□□□□□ -0.72
CLCN1-201ENST00000343257 UBE2L6O14933 153 aa10.57□□□□□ -0.72
CLCN1-201ENST00000343257 USP9XQ93008 2570 aaPredicted RBP10.56□□□□□ -0.72
CLCN1-201ENST00000343257 CCL18P55774 89 aa10.56□□□□□ -0.72
CLCN1-201ENST00000343257 CDC42SE2Q9NRR3 84 aa10.56□□□□□ -0.72
CLCN1-201ENST00000343257 ITPR1Q14643 2758 aa10.55□□□□□ -0.72
CLCN1-201ENST00000343257 LOC100131303A0A0U1RQF7 123 aa10.55□□□□□ -0.72
CLCN1-201ENST00000343257 COX7B2Q8TF08 81 aa10.55□□□□□ -0.72
CLCN1-201ENST00000343257 Q6ZTI0 123 aa10.55□□□□□ -0.72
CLCN1-201ENST00000343257 FAM19A1Q7Z5A9 133 aa10.55□□□□□ -0.72
CLCN1-201ENST00000343257 UPK3BQ9BT76 320 aa10.55□□□□□ -0.72
CLCN1-201ENST00000343257 TMEM89A2RUT3 159 aa10.54□□□□□ -0.72
CLCN1-201ENST00000343257 FHL2Q14192 279 aa10.54□□□□□ -0.72
CLCN1-201ENST00000343257 Q6JHZ5 121 aa10.54□□□□□ -0.72
CLCN1-201ENST00000343257 TMEM258P61165 79 aa10.53□□□□□ -0.72
CLCN1-201ENST00000343257 GHRHP01286 108 aa10.53□□□□□ -0.72
CLCN1-201ENST00000343257 MSMBP08118 114 aa10.53□□□□□ -0.72
CLCN1-201ENST00000343257 PRR3P79522 188 aaKnown RBP10.53□□□□□ -0.72
CLCN1-201ENST00000343257 PTPN13Q12923 2485 aa10.53□□□□□ -0.72
CLCN1-201ENST00000343257 CENPEQ02224 2701 aa10.53□□□□□ -0.72
CLCN1-201ENST00000343257 RPS28P62857 69 aaKnown RBP10.52□□□□□ -0.73
CLCN1-201ENST00000343257 ENHOQ6UWT2 76 aa10.52□□□□□ -0.73
CLCN1-201ENST00000343257 TLN2Q9Y4G6 2542 aa10.52□□□□□ -0.73
CLCN1-201ENST00000343257 INSP01308 110 aa10.52□□□□□ -0.73
CLCN1-201ENST00000343257 PRORYQ9H606 182 aa10.52□□□□□ -0.73
CLCN1-201ENST00000343257 MAP6D1Q9H9H5 199 aa10.52□□□□□ -0.73
CLCN1-201ENST00000343257 CHD6Q8TD26 2715 aa10.51□□□□□ -0.73
CLCN1-201ENST00000343257 C20orf197Q8N268 126 aa10.51□□□□□ -0.73
CLCN1-201ENST00000343257 DYNLRB2Q8TF09 96 aa10.51□□□□□ -0.73
CLCN1-201ENST00000343257 UTP20O75691 2785 aaKnown RBP10.51□□□□□ -0.73
CLCN1-201ENST00000343257 FBN2P35556 2912 aa10.5□□□□□ -0.73
CLCN1-201ENST00000343257 K7EQD1 137 aa10.5□□□□□ -0.73
CLCN1-201ENST00000343257 CCL19Q99731 98 aa10.5□□□□□ -0.73
CLCN1-201ENST00000343257 PLA2G2AP14555 144 aa10.5□□□□□ -0.73
CLCN1-201ENST00000343257 MXRA5Q9NR99 2828 aa10.49□□□□□ -0.73
CLCN1-201ENST00000343257 PF4P02776 101 aa10.49□□□□□ -0.73
CLCN1-201ENST00000343257 TMEM243Q9BU79 118 aa10.49□□□□□ -0.73
CLCN1-201ENST00000343257 NOP10Q9NPE3 64 aaKnown RBP10.49□□□□□ -0.73
CLCN1-201ENST00000343257 C11orf44Q8N8P7 122 aa10.49□□□□□ -0.73
CLCN1-201ENST00000343257 SPTBN4Q9H254 2564 aa10.48□□□□□ -0.73
CLCN1-201ENST00000343257 NIPBLQ6KC79 2804 aaeCLIP10.48□□□□□ -0.73
CLCN1-201ENST00000343257 IGLV4-60A0A075B6I1 120 aa10.48□□□□□ -0.73
CLCN1-201ENST00000343257 H0YGX0 51 aa10.48□□□□□ -0.73
CLCN1-201ENST00000343257 ORMDL1Q9P0S3 153 aa10.48□□□□□ -0.73
CLCN1-201ENST00000343257 FN1P02751 2386 aaKnown RBP10.48□□□□□ -0.73
CLCN1-201ENST00000343257 OVOL2Q9BRP0 275 aa10.47□□□□□ -0.73
CLCN1-201ENST00000343257 Q5XG85 94 aa10.47□□□□□ -0.73
CLCN1-201ENST00000343257 CLPSL2Q6UWE3 100 aa10.47□□□□□ -0.73
CLCN1-201ENST00000343257 SS18Q15532 418 aa10.46□□□□□ -0.73
CLCN1-201ENST00000343257 C1orf158Q8N1D5 194 aa10.46□□□□□ -0.74
CLCN1-201ENST00000343257 SONP18583 2426 aaKnown RBP10.45□□□□□ -0.74
CLCN1-201ENST00000343257 TRGV2A0A075B6R0 118 aa10.45□□□□□ -0.74
CLCN1-201ENST00000343257 C6orf226Q5I0X4 101 aa10.45□□□□□ -0.74
CLCN1-201ENST00000343257 TRAV25A0A0B4J276 109 aa10.45□□□□□ -0.74
CLCN1-201ENST00000343257 AKAP9Q99996 3911 aa10.45□□□□□ -0.74
CLCN1-201ENST00000343257 CCKP06307 115 aa10.44□□□□□ -0.74
CLCN1-201ENST00000343257 STHQ8IWL8 128 aa10.44□□□□□ -0.74
CLCN1-201ENST00000343257 OBSCN-AS1Q96MR7 158 aa10.44□□□□□ -0.74
CLCN1-201ENST00000343257 EPG5Q9HCE0 2579 aa10.44□□□□□ -0.74
CLCN1-201ENST00000343257 GNLYP22749 145 aa10.43□□□□□ -0.74
CLCN1-201ENST00000343257 A0A1W2PRX2 142 aa10.42□□□□□ -0.74
CLCN1-201ENST00000343257 XCL1P47992 114 aa10.42□□□□□ -0.74
CLCN1-201ENST00000343257 FAM19A3Q7Z5A8 133 aa10.42□□□□□ -0.74
CLCN1-201ENST00000343257 UCNP55089 124 aa10.42□□□□□ -0.74
CLCN1-201ENST00000343257 SNURFQ9Y675 71 aa10.41□□□□□ -0.74
CLCN1-201ENST00000343257 B4DSR2 109 aa10.41□□□□□ -0.74
CLCN1-201ENST00000343257 A8MTW9 85 aa10.4□□□□□ -0.74
CLCN1-201ENST00000343257 ZNF702PQ9H963 129 aa10.4□□□□□ -0.74
CLCN1-201ENST00000343257 TRBV6-4A0A1B0GX49 114 aa10.4□□□□□ -0.75
CLCN1-201ENST00000343257 NBL1P41271 181 aa10.4□□□□□ -0.75
CLCN1-201ENST00000343257 ODF3L2Q3SX64 289 aa10.4□□□□□ -0.75
CLCN1-201ENST00000343257 NAV2Q8IVL1 2488 aa10.4□□□□□ -0.75
CLCN1-201ENST00000343257 FLNCQ14315 2725 aa10.39□□□□□ -0.75
CLCN1-201ENST00000343257 NBPF19A0A087WUL8 3843 aa10.39□□□□□ -0.75
CLCN1-201ENST00000343257 TRGV4A0A0C4DH28 118 aa10.39□□□□□ -0.75
CLCN1-201ENST00000343257 HAMPP81172 84 aa10.39□□□□□ -0.75
CLCN1-201ENST00000343257 WFDC10AQ9H1F0 79 aa10.39□□□□□ -0.75
CLCN1-201ENST00000343257 IGHV3OR16-9A0A0B4J2B5 98 aa10.38□□□□□ -0.75
CLCN1-201ENST00000343257 TRBV10-1A0A0K0K1A3 114 aa10.38□□□□□ -0.75
CLCN1-201ENST00000343257 PRB1P04280 392 aa10.38□□□□□ -0.75
CLCN1-201ENST00000343257 DEFB114Q30KQ6 69 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms