RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 PRRC2AP48634 2157 aaKnown RBP5.9□□□□□ -1.46
UBE4B-202ENST00000343090 TRBV6-8A0A0A6YYG3 113 aa5.9□□□□□ -1.46
UBE4B-202ENST00000343090 INAFM1C9JVW0 142 aa5.9□□□□□ -1.46
UBE4B-202ENST00000343090 WFDC9Q8NEX5 89 aa5.9□□□□□ -1.46
UBE4B-202ENST00000343090 TRBV7-7A0A0K0K1E9 115 aa5.9□□□□□ -1.46
UBE4B-202ENST00000343090 C14orf177Q52M58 125 aa5.9□□□□□ -1.46
UBE4B-202ENST00000343090 IGIPA6NJ69 53 aa5.9□□□□□ -1.47
UBE4B-202ENST00000343090 TMEM256-PLSCR3K7ERE1 68 aa5.9□□□□□ -1.47
UBE4B-202ENST00000343090 UBE2D4Q9Y2X8 147 aa5.9□□□□□ -1.47
UBE4B-202ENST00000343090 A0A087WVE0 104 aa5.9□□□□□ -1.47
UBE4B-202ENST00000343090 C1orf195Q5TG92 126 aa5.9□□□□□ -1.47
UBE4B-202ENST00000343090 RAI1Q7Z5J4 1906 aaPredicted RBP5.89□□□□□ -1.47
UBE4B-202ENST00000343090 ZNF843Q8N446 348 aa5.89□□□□□ -1.47
UBE4B-202ENST00000343090 BBC3Q96PG8 261 aaPredicted RBP5.89□□□□□ -1.47
UBE4B-202ENST00000343090 XAGE1AQ9HD64 81 aa5.89□□□□□ -1.47
UBE4B-202ENST00000343090 PYGO1Q9Y3Y4 419 aa5.89□□□□□ -1.47
UBE4B-202ENST00000343090 MRGPRG-AS1Q2M3A8 158 aa5.89□□□□□ -1.47
UBE4B-202ENST00000343090 COX7BP24311 80 aa5.89□□□□□ -1.47
UBE4B-202ENST00000343090 B9D2Q9BPU9 175 aa5.89□□□□□ -1.47
UBE4B-202ENST00000343090 SNURFQ9Y675 71 aa5.89□□□□□ -1.47
UBE4B-202ENST00000343090 NHLRC4P0CG21 123 aaPredicted RBP5.88□□□□□ -1.47
UBE4B-202ENST00000343090 Q6JHZ5 121 aa5.88□□□□□ -1.47
UBE4B-202ENST00000343090 POM121L12Q8N7R1 296 aa5.88□□□□□ -1.47
UBE4B-202ENST00000343090 LINC01006Q8NI28 216 aa5.88□□□□□ -1.47
UBE4B-202ENST00000343090 IGKV2-24A0A0C4DH68 120 aa5.87□□□□□ -1.47
UBE4B-202ENST00000343090 TRBV6-4A0A1B0GX49 114 aa5.87□□□□□ -1.47
UBE4B-202ENST00000343090 SCXQ7RTU7 201 aa5.87□□□□□ -1.47
UBE4B-202ENST00000343090 SBSPONQ8IVN8 264 aa5.87□□□□□ -1.47
UBE4B-202ENST00000343090 ANKRD11Q6UB99 2663 aaPredicted RBP5.87□□□□□ -1.47
UBE4B-202ENST00000343090 TLN2Q9Y4G6 2542 aa5.87□□□□□ -1.47
UBE4B-202ENST00000343090 LINC01546A6NGU7 62 aa5.87□□□□□ -1.47
UBE4B-202ENST00000343090 KRTAP10-9P60411 292 aa5.87□□□□□ -1.47
UBE4B-202ENST00000343090 ATP5EP2Q5VTU8 51 aa5.87□□□□□ -1.47
UBE4B-202ENST00000343090 AGRNO00468 2067 aa5.87□□□□□ -1.47
UBE4B-202ENST00000343090 IBA57-AS1B1ANH7 110 aa5.87□□□□□ -1.47
UBE4B-202ENST00000343090 ZNF580Q9UK33 172 aa5.87□□□□□ -1.47
UBE4B-202ENST00000343090 C4orf26Q17RF5 130 aa5.86□□□□□ -1.47
UBE4B-202ENST00000343090 KIR2DL5BQ8NHK3 375 aa5.86□□□□□ -1.47
UBE4B-202ENST00000343090 C11orf45Q8TAV5 145 aa5.86□□□□□ -1.47
UBE4B-202ENST00000343090 LYRM9A8MSI8 78 aa5.86□□□□□ -1.47
UBE4B-202ENST00000343090 TIMM17BO60830 172 aa5.86□□□□□ -1.47
UBE4B-202ENST00000343090 ADAMTSL4-AS1Q5T5F5 129 aa5.86□□□□□ -1.47
UBE4B-202ENST00000343090 TET2Q6N021 2002 aaPredicted RBP5.86□□□□□ -1.47
UBE4B-202ENST00000343090 SETD2Q9BYW2 2564 aaPredicted RBP5.86□□□□□ -1.47
UBE4B-202ENST00000343090 C6orf99Q4VX62 202 aa5.85□□□□□ -1.47
UBE4B-202ENST00000343090 COX8CQ7Z4L0 72 aa5.85□□□□□ -1.47
UBE4B-202ENST00000343090 SERP1Q9Y6X1 66 aa5.85□□□□□ -1.47
UBE4B-202ENST00000343090 SMIM26A0A096LP01 95 aa5.84□□□□□ -1.47
UBE4B-202ENST00000343090 H0Y9J4 135 aa5.84□□□□□ -1.47
UBE4B-202ENST00000343090 USP9XQ93008 2570 aaPredicted RBP5.84□□□□□ -1.47
UBE4B-202ENST00000343090 ODF3L2Q3SX64 289 aa5.84□□□□□ -1.47
UBE4B-202ENST00000343090 MRPS36P82909 103 aaKnown RBP5.84□□□□□ -1.47
UBE4B-202ENST00000343090 LINC00959A0A1B0GUT2 108 aa5.83□□□□□ -1.48
UBE4B-202ENST00000343090 LY6G6DO95868 133 aa5.83□□□□□ -1.48
UBE4B-202ENST00000343090 ADAMTS20P59510 1910 aa5.83□□□□□ -1.48
UBE4B-202ENST00000343090 DEFB131BA0A096LNP1 70 aa5.83□□□□□ -1.48
UBE4B-202ENST00000343090 CRYGAP11844 174 aa5.83□□□□□ -1.48
UBE4B-202ENST00000343090 SMIM11BQ8TCY0 68 aa5.83□□□□□ -1.48
UBE4B-202ENST00000343090 SMR3AQ99954 134 aa5.83□□□□□ -1.48
UBE4B-202ENST00000343090 A0A096LNI7 61 aa5.83□□□□□ -1.48
UBE4B-202ENST00000343090 COX6A2Q02221 97 aa5.83□□□□□ -1.48
UBE4B-202ENST00000343090 CASC2Q6XLA1 102 aa5.83□□□□□ -1.48
UBE4B-202ENST00000343090 PDE6GP18545 87 aa5.83□□□□□ -1.48
UBE4B-202ENST00000343090 HIGD2AQ9BW72 106 aa5.83□□□□□ -1.48
UBE4B-202ENST00000343090 LINC00242Q5T6M2 205 aa5.83□□□□□ -1.48
UBE4B-202ENST00000343090 CDC42SE2Q9NRR3 84 aa5.83□□□□□ -1.48
UBE4B-202ENST00000343090 K7ERS5 55 aa5.82□□□□□ -1.48
UBE4B-202ENST00000343090 RPS28P62857 69 aaKnown RBP5.82□□□□□ -1.48
UBE4B-202ENST00000343090 PRRC2CQ9Y520 2896 aaKnown RBP5.82□□□□□ -1.48
UBE4B-202ENST00000343090 Q6ZSN1 163 aa5.82□□□□□ -1.48
UBE4B-202ENST00000343090 PRO0628Q9UI54 55 aa5.82□□□□□ -1.48
UBE4B-202ENST00000343090 IGKV4-1P06312 121 aa5.82□□□□□ -1.48
UBE4B-202ENST00000343090 CHCHD7Q9BUK0 85 aa5.82□□□□□ -1.48
UBE4B-202ENST00000343090 ABCA12Q86UK0 2595 aa5.82□□□□□ -1.48
UBE4B-202ENST00000343090 CHD8Q9HCK8 2581 aa5.81□□□□□ -1.48
UBE4B-202ENST00000343090 USP9YO00507 2555 aaPredicted RBP5.81□□□□□ -1.48
UBE4B-202ENST00000343090 IGKV2-28A0A075B6P5 120 aa5.81□□□□□ -1.48
UBE4B-202ENST00000343090 IGKV2D-28P01615 120 aa5.81□□□□□ -1.48
UBE4B-202ENST00000343090 C5orf42Q9H799 3197 aa5.81□□□□□ -1.48
UBE4B-202ENST00000343090 MRPL55Q7Z7F7 128 aaKnown RBP5.81□□□□□ -1.48
UBE4B-202ENST00000343090 BPY2O14599 106 aa5.81□□□□□ -1.48
UBE4B-202ENST00000343090 MIFP14174 115 aa5.81□□□□□ -1.48
UBE4B-202ENST00000343090 CD164L2Q6UWJ8 174 aa5.81□□□□□ -1.48
UBE4B-202ENST00000343090 ATP5EP56381 51 aaPredicted RBP5.8□□□□□ -1.48
UBE4B-202ENST00000343090 JMJD1CQ15652 2540 aa5.8□□□□□ -1.48
UBE4B-202ENST00000343090 HILS1P60008 231 aa5.8□□□□□ -1.48
UBE4B-202ENST00000343090 NDUFC1O43677 76 aa5.8□□□□□ -1.48
UBE4B-202ENST00000343090 Q6ZQY7 126 aa5.8□□□□□ -1.48
UBE4B-202ENST00000343090 C1orf158Q8N1D5 194 aa5.8□□□□□ -1.48
UBE4B-202ENST00000343090 SMIM1B2RUZ4 78 aa5.79□□□□□ -1.48
UBE4B-202ENST00000343090 SOSTDC1Q6X4U4 206 aa5.79□□□□□ -1.48
UBE4B-202ENST00000343090 C9orf116Q5BN46 136 aaPredicted RBP5.79□□□□□ -1.48
UBE4B-202ENST00000343090 IGLV4-60A0A075B6I1 120 aa5.79□□□□□ -1.48
UBE4B-202ENST00000343090 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.79□□□□□ -1.48
UBE4B-202ENST00000343090 A0A087WYN8 130 aa5.79□□□□□ -1.48
UBE4B-202ENST00000343090 C3orf84H3BNL1 204 aa5.79□□□□□ -1.48
UBE4B-202ENST00000343090 CCKP06307 115 aa5.79□□□□□ -1.48
UBE4B-202ENST00000343090 PLA2G2AP14555 144 aa5.79□□□□□ -1.48
UBE4B-202ENST00000343090 PRR3P79522 188 aaKnown RBP5.79□□□□□ -1.48
UBE4B-202ENST00000343090 SPTSSBQ8NFR3 76 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms