RNA–Protein interactions for RNA: ENST00000341935.9

CCR6-201, Transcript of C-C motif chemokine receptor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR6, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR6-201ENST00000341935 Q8N1Y9 231 aa4.39□□□□□ -1.71
CCR6-201ENST00000341935 LINC00467Q9BRT7 94 aa4.39□□□□□ -1.71
CCR6-201ENST00000341935 IGHV4-4A0A075B6R2 117 aa4.39□□□□□ -1.71
CCR6-201ENST00000341935 GIG44P09565 113 aaPredicted RBP4.39□□□□□ -1.71
CCR6-201ENST00000341935 MSRB1Q9NZV6 116 aa4.39□□□□□ -1.71
CCR6-201ENST00000341935 LAMTOR3Q9UHA4 124 aa4.39□□□□□ -1.71
CCR6-201ENST00000341935 FAT3Q8TDW7 4589 aa4.39□□□□□ -1.71
CCR6-201ENST00000341935 LINC01549A6NIU2 74 aa4.39□□□□□ -1.71
CCR6-201ENST00000341935 SMCPP49901 116 aaPredicted RBP4.39□□□□□ -1.71
CCR6-201ENST00000341935 SPANXN1Q5VSR9 72 aa4.39□□□□□ -1.71
CCR6-201ENST00000341935 SERP1Q9Y6X1 66 aa4.39□□□□□ -1.71
CCR6-201ENST00000341935 LGALS9CQ6DKI2 356 aa4.38□□□□□ -1.71
CCR6-201ENST00000341935 C1orf158Q8N1D5 194 aa4.38□□□□□ -1.71
CCR6-201ENST00000341935 PHLDA3Q9Y5J5 127 aa4.38□□□□□ -1.71
CCR6-201ENST00000341935 KRTAP10-11P60412 298 aa4.38□□□□□ -1.71
CCR6-201ENST00000341935 HTN1P15515 57 aa4.38□□□□□ -1.71
CCR6-201ENST00000341935 FAM222AQ5U5X8 452 aa4.38□□□□□ -1.71
CCR6-201ENST00000341935 PRSS3P2Q8NHM4 247 aa4.38□□□□□ -1.71
CCR6-201ENST00000341935 UBE2WQ96B02 151 aa4.38□□□□□ -1.71
CCR6-201ENST00000341935 M0R381 172 aa4.37□□□□□ -1.71
CCR6-201ENST00000341935 NXPH4O95158 308 aa4.37□□□□□ -1.71
CCR6-201ENST00000341935 PRM2P04554 102 aa4.37□□□□□ -1.71
CCR6-201ENST00000341935 CXCL5P42830 114 aa4.37□□□□□ -1.71
CCR6-201ENST00000341935 EGFEM1PQ0D2K5 195 aa4.37□□□□□ -1.71
CCR6-201ENST00000341935 ZFP2Q6ZN57 461 aa4.37□□□□□ -1.71
CCR6-201ENST00000341935 IGHV3OR16-12A0A075B7B8 117 aa4.37□□□□□ -1.71
CCR6-201ENST00000341935 UBE2L6O14933 153 aa4.37□□□□□ -1.71
CCR6-201ENST00000341935 PPP1R17O96001 155 aa4.37□□□□□ -1.71
CCR6-201ENST00000341935 FAM104BQ5XKR9 115 aa4.37□□□□□ -1.71
CCR6-201ENST00000341935 CSNK1G2-AS1Q8NCQ2 148 aa4.37□□□□□ -1.71
CCR6-201ENST00000341935 SORL1Q92673 2214 aa4.37□□□□□ -1.71
CCR6-201ENST00000341935 TMEM170BQ5T4T1 132 aa4.37□□□□□ -1.71
CCR6-201ENST00000341935 SOSTDC1Q6X4U4 206 aa4.37□□□□□ -1.71
CCR6-201ENST00000341935 IGHV1-24A0A0C4DH33 117 aa4.36□□□□□ -1.71
CCR6-201ENST00000341935 TEX49A0A1B0GTD5 131 aa4.36□□□□□ -1.71
CCR6-201ENST00000341935 C8orf87E5RJ46 101 aa4.36□□□□□ -1.71
CCR6-201ENST00000341935 C11orf72Q8NBR9 251 aa4.36□□□□□ -1.71
CCR6-201ENST00000341935 RNF185Q96GF1 192 aa4.36□□□□□ -1.71
CCR6-201ENST00000341935 TTTY13Q9BZ97 58 aa4.36□□□□□ -1.71
CCR6-201ENST00000341935 MRPL51Q4U2R6 128 aaKnown RBP4.36□□□□□ -1.71
CCR6-201ENST00000341935 NEXN-AS1Q8NBZ9 246 aa4.36□□□□□ -1.71
CCR6-201ENST00000341935 SPTSSBQ8NFR3 76 aa4.36□□□□□ -1.71
CCR6-201ENST00000341935 U3KQK5 164 aa4.36□□□□□ -1.71
CCR6-201ENST00000341935 MYMXA0A1B0GTQ4 84 aa4.36□□□□□ -1.71
CCR6-201ENST00000341935 SCGB1D4Q6XE38 83 aa4.36□□□□□ -1.71
CCR6-201ENST00000341935 NPYP01303 97 aa4.35□□□□□ -1.71
CCR6-201ENST00000341935 IGHV4-30-4P0DP06 118 aa4.35□□□□□ -1.71
CCR6-201ENST00000341935 C2orf82Q6UX34 121 aa4.35□□□□□ -1.71
CCR6-201ENST00000341935 MUC4Q99102 2169 aa4.35□□□□□ -1.71
CCR6-201ENST00000341935 VPS13BQ7Z7G8 4022 aa4.35□□□□□ -1.71
CCR6-201ENST00000341935 D6R8Y8 96 aa4.35□□□□□ -1.71
CCR6-201ENST00000341935 TMEM256-PLSCR3K7ERE1 68 aa4.35□□□□□ -1.71
CCR6-201ENST00000341935 SERP2Q8N6R1 65 aa4.35□□□□□ -1.71
CCR6-201ENST00000341935 IMUPQ9GZP8 106 aa4.35□□□□□ -1.71
CCR6-201ENST00000341935 PRSS1P07477 247 aa4.35□□□□□ -1.71
CCR6-201ENST00000341935 C14orf178Q8N769 122 aaPredicted RBP4.35□□□□□ -1.71
CCR6-201ENST00000341935 TMEM263Q8WUH6 116 aaKnown RBP4.35□□□□□ -1.71
CCR6-201ENST00000341935 CKS2P33552 79 aa4.34□□□□□ -1.71
CCR6-201ENST00000341935 ZNF876PQ49A33 203 aa4.34□□□□□ -1.71
CCR6-201ENST00000341935 ORMDL3Q8N138 153 aa4.34□□□□□ -1.71
CCR6-201ENST00000341935 C20orf197Q8N268 126 aa4.34□□□□□ -1.71
CCR6-201ENST00000341935 C16orf74Q96GX8 76 aa4.34□□□□□ -1.71
CCR6-201ENST00000341935 LINC00474Q9P2X8 69 aa4.34□□□□□ -1.71
CCR6-201ENST00000341935 NCR2O95944 276 aa4.34□□□□□ -1.71
CCR6-201ENST00000341935 MGPP08493 103 aa4.34□□□□□ -1.71
CCR6-201ENST00000341935 LINC01545Q5VT33 79 aa4.34□□□□□ -1.71
CCR6-201ENST00000341935 FAM19A3Q7Z5A8 133 aa4.34□□□□□ -1.71
CCR6-201ENST00000341935 POM121L12Q8N7R1 296 aa4.34□□□□□ -1.71
CCR6-201ENST00000341935 KIF25-AS1Q9Y6Z4 181 aa4.34□□□□□ -1.71
CCR6-201ENST00000341935 TRBV25-1A0A075B6N4 114 aa4.34□□□□□ -1.72
CCR6-201ENST00000341935 PIK3CD-AS1Q5SR53 167 aa4.34□□□□□ -1.72
CCR6-201ENST00000341935 STAB1Q9NY15 2570 aa4.34□□□□□ -1.72
CCR6-201ENST00000341935 FAT2Q9NYQ8 4349 aa4.33□□□□□ -1.72
CCR6-201ENST00000341935 TRBV7-7A0A0K0K1E9 115 aa4.33□□□□□ -1.72
CCR6-201ENST00000341935 GAS8-AS1O95177 125 aa4.33□□□□□ -1.72
CCR6-201ENST00000341935 LINC00315P59091 139 aa4.33□□□□□ -1.72
CCR6-201ENST00000341935 RPL18AQ02543 176 aaKnown RBP4.33□□□□□ -1.72
CCR6-201ENST00000341935 DEFB135Q30KP9 77 aa4.33□□□□□ -1.72
CCR6-201ENST00000341935 PHLDA1Q8WV24 401 aaPredicted RBP4.33□□□□□ -1.72
CCR6-201ENST00000341935 X6R8D5 127 aa4.33□□□□□ -1.72
CCR6-201ENST00000341935 FAM74A4Q5TZK3 123 aa4.32□□□□□ -1.72
CCR6-201ENST00000341935 PKD1L1Q8TDX9 2849 aa4.32□□□□□ -1.72
CCR6-201ENST00000341935 SUMO4Q6EEV6 95 aa4.32□□□□□ -1.72
CCR6-201ENST00000341935 NRACQ8N912 160 aa4.32□□□□□ -1.72
CCR6-201ENST00000341935 CYSTM1Q9H1C7 97 aa4.32□□□□□ -1.72
CCR6-201ENST00000341935 NOP10Q9NPE3 64 aaKnown RBP4.32□□□□□ -1.72
CCR6-201ENST00000341935 TRGV1A0A0A0MS02 117 aa4.32□□□□□ -1.72
CCR6-201ENST00000341935 LOC389332A0A1B0GUA5 103 aa4.32□□□□□ -1.72
CCR6-201ENST00000341935 URB1-AS1Q96HZ7 61 aa4.32□□□□□ -1.72
CCR6-201ENST00000341935 OVOL2Q9BRP0 275 aa4.32□□□□□ -1.72
CCR6-201ENST00000341935 F5H697 171 aa4.31□□□□□ -1.72
CCR6-201ENST00000341935 HIST1H4AP62805 103 aaKnown RBP4.31□□□□□ -1.72
CCR6-201ENST00000341935 REG3AQ06141 175 aa4.31□□□□□ -1.72
CCR6-201ENST00000341935 COL6A5A8TX70 2615 aa4.31□□□□□ -1.72
CCR6-201ENST00000341935 ZNF22P17026 224 aaPredicted RBP4.31□□□□□ -1.72
CCR6-201ENST00000341935 FUSP35637 526 aaKnown RBP eCLIP4.31□□□□□ -1.72
CCR6-201ENST00000341935 KPRPQ5T749 579 aaPredicted RBP4.31□□□□□ -1.72
CCR6-201ENST00000341935 Q6ZTI0 123 aa4.31□□□□□ -1.72
CCR6-201ENST00000341935 KTN1-AS1Q86SY8 53 aa4.31□□□□□ -1.72
CCR6-201ENST00000341935 LINC00643Q86TS7 51 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms