RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 POM121L12Q8N7R1 296 aa8.73□□□□□ -1.01
CDH5-201ENST00000341529 ODF3Q96PU9 254 aa8.73□□□□□ -1.01
CDH5-201ENST00000341529 SPART-AS1P0CW21 52 aa8.73□□□□□ -1.01
CDH5-201ENST00000341529 C9orf153Q5TBE3 101 aa8.73□□□□□ -1.01
CDH5-201ENST00000341529 UBR5O95071 2799 aaPredicted RBP8.73□□□□□ -1.01
CDH5-201ENST00000341529 ZMAT4Q9H898 229 aa8.73□□□□□ -1.01
CDH5-201ENST00000341529 NBEAL2Q6ZNJ1 2754 aa8.72□□□□□ -1.01
CDH5-201ENST00000341529 C9orf66Q5T8R8 295 aa8.72□□□□□ -1.01
CDH5-201ENST00000341529 SS18L2Q9UHA2 77 aa8.72□□□□□ -1.01
CDH5-201ENST00000341529 LY6G6DO95868 133 aa8.72□□□□□ -1.01
CDH5-201ENST00000341529 HERV-K104P63124 156 aa8.72□□□□□ -1.01
CDH5-201ENST00000341529 PRO0255Q9UI72 69 aa8.72□□□□□ -1.01
CDH5-201ENST00000341529 TRBV10-1A0A0K0K1A3 114 aa8.72□□□□□ -1.01
CDH5-201ENST00000341529 TRBV6-5A0A0K0K1A5 114 aa8.72□□□□□ -1.01
CDH5-201ENST00000341529 HIGD2BQ4VC39 106 aa8.72□□□□□ -1.01
CDH5-201ENST00000341529 TRBV10-2A0A0K0K1G8 114 aa8.71□□□□□ -1.01
CDH5-201ENST00000341529 MRPL23Q16540 153 aaKnown RBP8.71□□□□□ -1.01
CDH5-201ENST00000341529 NBEAL1Q6ZS30 2694 aa8.71□□□□□ -1.02
CDH5-201ENST00000341529 CAMK2N2Q96S95 79 aa8.71□□□□□ -1.02
CDH5-201ENST00000341529 LINC00694P0DN24 101 aa8.7□□□□□ -1.02
CDH5-201ENST00000341529 STAB1Q9NY15 2570 aa8.7□□□□□ -1.02
CDH5-201ENST00000341529 IGLV4-69A0A075B6H9 119 aa8.7□□□□□ -1.02
CDH5-201ENST00000341529 SPAG11BQ08648 103 aa8.7□□□□□ -1.02
CDH5-201ENST00000341529 LINC00308Q8TCZ7 52 aa8.7□□□□□ -1.02
CDH5-201ENST00000341529 NOTCH1P46531 2555 aa8.7□□□□□ -1.02
CDH5-201ENST00000341529 PRB2P02812 416 aaPredicted RBP8.7□□□□□ -1.02
CDH5-201ENST00000341529 NKAPP1Q8N9T2 125 aa8.7□□□□□ -1.02
CDH5-201ENST00000341529 ZFHX4Q86UP3 3567 aa8.7□□□□□ -1.02
CDH5-201ENST00000341529 XAGE1AQ9HD64 81 aa8.69□□□□□ -1.02
CDH5-201ENST00000341529 C14orf132Q9NPU4 83 aa8.69□□□□□ -1.02
CDH5-201ENST00000341529 UBE2D4Q9Y2X8 147 aa8.69□□□□□ -1.02
CDH5-201ENST00000341529 OVOL2Q9BRP0 275 aa8.69□□□□□ -1.02
CDH5-201ENST00000341529 COX8CQ7Z4L0 72 aa8.69□□□□□ -1.02
CDH5-201ENST00000341529 C1orf43Q9BWL3 253 aa8.69□□□□□ -1.02
CDH5-201ENST00000341529 FAM236AA0A1B0GUQ0 79 aa8.68□□□□□ -1.02
CDH5-201ENST00000341529 FAM236BA0A1B0GV22 79 aa8.68□□□□□ -1.02
CDH5-201ENST00000341529 RPL18AQ02543 176 aaKnown RBP8.68□□□□□ -1.02
CDH5-201ENST00000341529 RBMY1FQ15415 496 aaKnown RBP8.68□□□□□ -1.02
CDH5-201ENST00000341529 IGHV4-28A0A0C4DH34 117 aa8.67□□□□□ -1.02
CDH5-201ENST00000341529 ORMDL1Q9P0S3 153 aa8.67□□□□□ -1.02
CDH5-201ENST00000341529 TRBV6-8A0A0A6YYG3 113 aa8.67□□□□□ -1.02
CDH5-201ENST00000341529 UBL5Q9BZL1 73 aa8.67□□□□□ -1.02
CDH5-201ENST00000341529 ADAMTSL4-AS1Q5T5F5 129 aa8.66□□□□□ -1.02
CDH5-201ENST00000341529 UFSP1Q6NVU6 142 aa8.66□□□□□ -1.02
CDH5-201ENST00000341529 C1orf158Q8N1D5 194 aa8.66□□□□□ -1.02
CDH5-201ENST00000341529 COL27A1Q8IZC6 1860 aaPredicted RBP8.66□□□□□ -1.02
CDH5-201ENST00000341529 A0A0B4J2C4 111 aa8.66□□□□□ -1.02
CDH5-201ENST00000341529 COX6A2Q02221 97 aa8.66□□□□□ -1.02
CDH5-201ENST00000341529 RNF183Q96D59 192 aa8.65□□□□□ -1.02
CDH5-201ENST00000341529 REG3AQ06141 175 aa8.65□□□□□ -1.02
CDH5-201ENST00000341529 CRYBG3Q68DQ2 2970 aa8.65□□□□□ -1.03
CDH5-201ENST00000341529 LINC00242Q5T6M2 205 aa8.65□□□□□ -1.03
CDH5-201ENST00000341529 LRRC75A-AS1Q8N1F1 130 aa8.65□□□□□ -1.03
CDH5-201ENST00000341529 CHCHD10Q8WYQ3 142 aaPredicted RBP8.65□□□□□ -1.03
CDH5-201ENST00000341529 ZANQ9Y493 2812 aa8.64□□□□□ -1.03
CDH5-201ENST00000341529 COL6A5A8TX70 2615 aa8.64□□□□□ -1.03
CDH5-201ENST00000341529 UNC79Q9P2D8 2635 aa8.64□□□□□ -1.03
CDH5-201ENST00000341529 DSCR8Q96T75 97 aa8.64□□□□□ -1.03
CDH5-201ENST00000341529 KIF25-AS1Q9Y6Z4 181 aa8.64□□□□□ -1.03
CDH5-201ENST00000341529 OXLD1Q5BKU9 147 aa8.63□□□□□ -1.03
CDH5-201ENST00000341529 PYGO1Q9Y3Y4 419 aa8.63□□□□□ -1.03
CDH5-201ENST00000341529 UTP20O75691 2785 aaKnown RBP8.63□□□□□ -1.03
CDH5-201ENST00000341529 H3BT86 120 aa8.63□□□□□ -1.03
CDH5-201ENST00000341529 ITPR2Q14571 2701 aa8.63□□□□□ -1.03
CDH5-201ENST00000341529 IGLV4-60A0A075B6I1 120 aa8.63□□□□□ -1.03
CDH5-201ENST00000341529 UBE2D1P51668 147 aa8.63□□□□□ -1.03
CDH5-201ENST00000341529 XGP55808 180 aa8.63□□□□□ -1.03
CDH5-201ENST00000341529 SPANXCQ9NY87 97 aa8.63□□□□□ -1.03
CDH5-201ENST00000341529 GHRHP01286 108 aa8.62□□□□□ -1.03
CDH5-201ENST00000341529 LINC00315P59091 139 aa8.62□□□□□ -1.03
CDH5-201ENST00000341529 MRPS36P82909 103 aaKnown RBP8.62□□□□□ -1.03
CDH5-201ENST00000341529 H0YGX0 51 aa8.61□□□□□ -1.03
CDH5-201ENST00000341529 NDUFA1O15239 70 aa8.61□□□□□ -1.03
CDH5-201ENST00000341529 PRR3P79522 188 aaKnown RBP8.61□□□□□ -1.03
CDH5-201ENST00000341529 CHCHD7Q9BUK0 85 aa8.61□□□□□ -1.03
CDH5-201ENST00000341529 RPL32P62910 135 aaKnown RBP8.61□□□□□ -1.03
CDH5-201ENST00000341529 C9orf116Q5BN46 136 aaPredicted RBP8.61□□□□□ -1.03
CDH5-201ENST00000341529 SMIM20Q8N5G0 67 aa8.61□□□□□ -1.03
CDH5-201ENST00000341529 TMEM126AQ9H061 195 aa8.61□□□□□ -1.03
CDH5-201ENST00000341529 TIRAPP58753 221 aa8.6□□□□□ -1.03
CDH5-201ENST00000341529 CDC42SE2Q9NRR3 84 aa8.6□□□□□ -1.03
CDH5-201ENST00000341529 TRBV6-4A0A1B0GX49 114 aa8.6□□□□□ -1.03
CDH5-201ENST00000341529 SDIM1Q6ZPB5 146 aa8.59□□□□□ -1.03
CDH5-201ENST00000341529 UBE2D3P61077 147 aa8.59□□□□□ -1.03
CDH5-201ENST00000341529 UBE2D2P62837 147 aa8.59□□□□□ -1.03
CDH5-201ENST00000341529 A0A1B0GX51 115 aa8.59□□□□□ -1.03
CDH5-201ENST00000341529 C6orf99Q4VX62 202 aa8.58□□□□□ -1.04
CDH5-201ENST00000341529 F8WEM9 126 aa8.58□□□□□ -1.04
CDH5-201ENST00000341529 TRACP01848 142 aa8.58□□□□□ -1.04
CDH5-201ENST00000341529 UBE2BP63146 152 aa8.58□□□□□ -1.04
CDH5-201ENST00000341529 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.58□□□□□ -1.04
CDH5-201ENST00000341529 TRBV30A0A0K0K1B3 111 aa8.58□□□□□ -1.04
CDH5-201ENST00000341529 SMIM1B2RUZ4 78 aa8.57□□□□□ -1.04
CDH5-201ENST00000341529 HILS1P60008 231 aa8.57□□□□□ -1.04
CDH5-201ENST00000341529 IGKV2-24A0A0C4DH68 120 aa8.57□□□□□ -1.04
CDH5-201ENST00000341529 LINC00959A0A1B0GUT2 108 aa8.57□□□□□ -1.04
CDH5-201ENST00000341529 CLUHP3Q96NS8 147 aa8.57□□□□□ -1.04
CDH5-201ENST00000341529 RETNQ9HD89 108 aa8.57□□□□□ -1.04
CDH5-201ENST00000341529 hADV29S1A0JD25 119 aa8.57□□□□□ -1.04
CDH5-201ENST00000341529 SCXQ7RTU7 201 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms