RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 IGLV5-39A0A0G2JS06 123 aa10.6□□□□□ -0.71
TPM3-208ENST00000341485 CDC42SE2Q9NRR3 84 aa10.6□□□□□ -0.71
TPM3-208ENST00000341485 TRAV13-1A0A0B4J241 112 aa10.59□□□□□ -0.71
TPM3-208ENST00000341485 J3QR89 54 aa10.59□□□□□ -0.71
TPM3-208ENST00000341485 NDUFA1O15239 70 aa10.59□□□□□ -0.71
TPM3-208ENST00000341485 TIMM17BO60830 172 aa10.59□□□□□ -0.71
TPM3-208ENST00000341485 NPC2P61916 151 aa10.59□□□□□ -0.71
TPM3-208ENST00000341485 ATP6V0E2Q8NHE4 81 aa10.59□□□□□ -0.71
TPM3-208ENST00000341485 KIR2DL5BQ8NHK3 375 aa10.59□□□□□ -0.71
TPM3-208ENST00000341485 GTSF1LQ9H1H1 148 aa10.59□□□□□ -0.71
TPM3-208ENST00000341485 TRBV6-4A0A1B0GX49 114 aa10.58□□□□□ -0.72
TPM3-208ENST00000341485 TMEM243Q9BU79 118 aa10.58□□□□□ -0.72
TPM3-208ENST00000341485 SMIM1B2RUZ4 78 aa10.57□□□□□ -0.72
TPM3-208ENST00000341485 CIDEAO60543 219 aa10.57□□□□□ -0.72
TPM3-208ENST00000341485 FBN1P35555 2871 aaKnown RBP10.57□□□□□ -0.72
TPM3-208ENST00000341485 TRGV4A0A0C4DH28 118 aa10.57□□□□□ -0.72
TPM3-208ENST00000341485 IGHV4-30-4P0DP06 118 aa10.57□□□□□ -0.72
TPM3-208ENST00000341485 Q1RN00 199 aa10.57□□□□□ -0.72
TPM3-208ENST00000341485 KRTAP10-11P60412 298 aa10.56□□□□□ -0.72
TPM3-208ENST00000341485 SMAGPQ0VAQ4 97 aa10.56□□□□□ -0.72
TPM3-208ENST00000341485 FOXI1Q12951 378 aa10.56□□□□□ -0.72
TPM3-208ENST00000341485 FHL2Q14192 279 aa10.56□□□□□ -0.72
TPM3-208ENST00000341485 DAND5Q8N907 189 aa10.56□□□□□ -0.72
TPM3-208ENST00000341485 UBE2L6O14933 153 aa10.56□□□□□ -0.72
TPM3-208ENST00000341485 Q9H8V8 135 aa10.56□□□□□ -0.72
TPM3-208ENST00000341485 F5H768 121 aa10.55□□□□□ -0.72
TPM3-208ENST00000341485 EGFEM1PQ0D2K5 195 aa10.55□□□□□ -0.72
TPM3-208ENST00000341485 DEFB135Q30KP9 77 aa10.55□□□□□ -0.72
TPM3-208ENST00000341485 VWFP04275 2813 aa10.55□□□□□ -0.72
TPM3-208ENST00000341485 GAGE12HA6NDE8 117 aa10.54□□□□□ -0.72
TPM3-208ENST00000341485 TRIAP1O43715 76 aa10.54□□□□□ -0.72
TPM3-208ENST00000341485 IFITM1P13164 125 aa10.54□□□□□ -0.72
TPM3-208ENST00000341485 RNF183Q96D59 192 aa10.54□□□□□ -0.72
TPM3-208ENST00000341485 TRBV30A0A0K0K1B3 111 aa10.54□□□□□ -0.72
TPM3-208ENST00000341485 SMIM9A6NGZ8 99 aa10.54□□□□□ -0.72
TPM3-208ENST00000341485 SPATA25Q9BR10 227 aa10.54□□□□□ -0.72
TPM3-208ENST00000341485 H7C423 109 aa10.53□□□□□ -0.72
TPM3-208ENST00000341485 TEN1Q86WV5 123 aa10.53□□□□□ -0.72
TPM3-208ENST00000341485 CARD19Q96LW7 228 aa10.53□□□□□ -0.72
TPM3-208ENST00000341485 X6R8D5 127 aa10.53□□□□□ -0.72
TPM3-208ENST00000341485 ZNF625Q96I27 306 aaPredicted RBP10.53□□□□□ -0.72
TPM3-208ENST00000341485 C9JAW5 83 aa10.52□□□□□ -0.73
TPM3-208ENST00000341485 GAGE6Q13070 117 aa10.52□□□□□ -0.73
TPM3-208ENST00000341485 ICOSQ9Y6W8 199 aa10.52□□□□□ -0.73
TPM3-208ENST00000341485 SLC25A20O43772 301 aa10.51□□□□□ -0.73
TPM3-208ENST00000341485 CIRBPQ14011 172 aaKnown RBP10.51□□□□□ -0.73
TPM3-208ENST00000341485 ANKRD29Q8N6D5 301 aa10.51□□□□□ -0.73
TPM3-208ENST00000341485 PPDPFLQ8WWR9 84 aa10.51□□□□□ -0.73
TPM3-208ENST00000341485 TRRAPQ9Y4A5 3859 aa10.51□□□□□ -0.73
TPM3-208ENST00000341485 ATXN8Q156A1 80 aa10.51□□□□□ -0.73
TPM3-208ENST00000341485 LINC00308Q8TCZ7 52 aa10.51□□□□□ -0.73
TPM3-208ENST00000341485 MAST4O15021 2626 aa10.51□□□□□ -0.73
TPM3-208ENST00000341485 TRBV6-8A0A0A6YYG3 113 aa10.5□□□□□ -0.73
TPM3-208ENST00000341485 DEFB130BP0DP73 79 aa10.5□□□□□ -0.73
TPM3-208ENST00000341485 DEFB130AP0DP74 79 aa10.5□□□□□ -0.73
TPM3-208ENST00000341485 LINC00612Q8N6U2 182 aa10.5□□□□□ -0.73
TPM3-208ENST00000341485 SIGMAR1Q99720 223 aa10.5□□□□□ -0.73
TPM3-208ENST00000341485 IGLV4-60A0A075B6I1 120 aa10.49□□□□□ -0.73
TPM3-208ENST00000341485 A0A0U1RRA0 63 aa10.49□□□□□ -0.73
TPM3-208ENST00000341485 LINC01620Q4KN68 170 aa10.49□□□□□ -0.73
TPM3-208ENST00000341485 M0QXV9 152 aa10.49□□□□□ -0.73
TPM3-208ENST00000341485 RPL13AP40429 203 aaKnown RBP10.49□□□□□ -0.73
TPM3-208ENST00000341485 SOSTDC1Q6X4U4 206 aa10.48□□□□□ -0.73
TPM3-208ENST00000341485 MDFIQ99750 246 aa10.48□□□□□ -0.73
TPM3-208ENST00000341485 MEIG1Q5JSS6 88 aa10.47□□□□□ -0.73
TPM3-208ENST00000341485 CHCHD5Q9BSY4 110 aa10.47□□□□□ -0.73
TPM3-208ENST00000341485 IGHV4-28A0A0C4DH34 117 aa10.46□□□□□ -0.73
TPM3-208ENST00000341485 IGKV3OR2-268A0A0C4DH90 116 aa10.46□□□□□ -0.73
TPM3-208ENST00000341485 MIFP14174 115 aa10.46□□□□□ -0.73
TPM3-208ENST00000341485 HERV-K104P63124 156 aa10.46□□□□□ -0.73
TPM3-208ENST00000341485 CDIP1Q9H305 208 aa10.46□□□□□ -0.74
TPM3-208ENST00000341485 STAB1Q9NY15 2570 aa10.46□□□□□ -0.74
TPM3-208ENST00000341485 DEFB4AO15263 64 aa10.45□□□□□ -0.74
TPM3-208ENST00000341485 TRBV10-2A0A0K0K1G8 114 aa10.45□□□□□ -0.74
TPM3-208ENST00000341485 LYRM9A8MSI8 78 aa10.45□□□□□ -0.74
TPM3-208ENST00000341485 COX6CP09669 75 aa10.45□□□□□ -0.74
TPM3-208ENST00000341485 GYPEP15421 78 aa10.45□□□□□ -0.74
TPM3-208ENST00000341485 FAM222AQ5U5X8 452 aa10.45□□□□□ -0.74
TPM3-208ENST00000341485 CLEC2BQ92478 149 aa10.45□□□□□ -0.74
TPM3-208ENST00000341485 LINC01600Q96MT4 127 aa10.45□□□□□ -0.74
TPM3-208ENST00000341485 COX7B2Q8TF08 81 aa10.44□□□□□ -0.74
TPM3-208ENST00000341485 Q8NAQ8 132 aa10.43□□□□□ -0.74
TPM3-208ENST00000341485 COPS9Q8WXC6 57 aa10.43□□□□□ -0.74
TPM3-208ENST00000341485 IGHV3OR16-9A0A0B4J2B5 98 aa10.42□□□□□ -0.74
TPM3-208ENST00000341485 LST1O00453 97 aa10.42□□□□□ -0.74
TPM3-208ENST00000341485 NTN5Q8WTR8 489 aaPredicted RBP10.42□□□□□ -0.74
TPM3-208ENST00000341485 TOMM7Q9P0U1 55 aa10.42□□□□□ -0.74
TPM3-208ENST00000341485 CMYA5Q8N3K9 4069 aa10.41□□□□□ -0.74
TPM3-208ENST00000341485 SCGB1A1P11684 91 aa10.41□□□□□ -0.74
TPM3-208ENST00000341485 DAD1P61803 113 aa10.4□□□□□ -0.74
TPM3-208ENST00000341485 RETNQ9HD89 108 aa10.4□□□□□ -0.74
TPM3-208ENST00000341485 PRO0255Q9UI72 69 aa10.4□□□□□ -0.74
TPM3-208ENST00000341485 COL6A5A8TX70 2615 aa10.4□□□□□ -0.74
TPM3-208ENST00000341485 LINC00959A0A1B0GUT2 108 aa10.4□□□□□ -0.75
TPM3-208ENST00000341485 PPDPFQ9H3Y8 114 aa10.4□□□□□ -0.75
TPM3-208ENST00000341485 A0A087WZ39 114 aa10.39□□□□□ -0.75
TPM3-208ENST00000341485 PRB2P02812 416 aaPredicted RBP10.39□□□□□ -0.75
TPM3-208ENST00000341485 SPART-AS1P0CW21 52 aa10.39□□□□□ -0.75
TPM3-208ENST00000341485 C5orf38Q86SI9 138 aa10.39□□□□□ -0.75
TPM3-208ENST00000341485 C2orf82Q6UX34 121 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms