RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 A0A0J9YXV3 536 aa4.9□□□□□ -1.63
NUP43-201ENST00000340413 A0A0J9YY99 117 aa4.9□□□□□ -1.63
NUP43-201ENST00000340413 APOMO95445 188 aa4.89□□□□□ -1.63
NUP43-201ENST00000340413 HNRNPA3P51991 378 aaKnown RBP4.89□□□□□ -1.63
NUP43-201ENST00000340413 Q8IZM0 81 aa4.89□□□□□ -1.63
NUP43-201ENST00000340413 J3QQQ9 107 aa4.89□□□□□ -1.63
NUP43-201ENST00000340413 LGALS3P17931 250 aaKnown RBP4.89□□□□□ -1.63
NUP43-201ENST00000340413 DEFB104AQ8WTQ1 72 aa4.89□□□□□ -1.63
NUP43-201ENST00000340413 IBA57-AS1B1ANH7 110 aa4.89□□□□□ -1.63
NUP43-201ENST00000340413 SPANXDQ9BXN6 97 aa4.89□□□□□ -1.63
NUP43-201ENST00000340413 SPANXCQ9NY87 97 aa4.89□□□□□ -1.63
NUP43-201ENST00000340413 TRAV8-3A0A0A6YYJ7 113 aa4.88□□□□□ -1.63
NUP43-201ENST00000340413 IFITM1P13164 125 aa4.88□□□□□ -1.63
NUP43-201ENST00000340413 REG3AQ06141 175 aa4.88□□□□□ -1.63
NUP43-201ENST00000340413 ESRGQ1W209 222 aa4.88□□□□□ -1.63
NUP43-201ENST00000340413 MPV17L2Q567V2 206 aa4.88□□□□□ -1.63
NUP43-201ENST00000340413 TTC32Q5I0X7 151 aa4.88□□□□□ -1.63
NUP43-201ENST00000340413 IGLV4-60A0A075B6I1 120 aa4.88□□□□□ -1.63
NUP43-201ENST00000340413 SMIM1B2RUZ4 78 aa4.88□□□□□ -1.63
NUP43-201ENST00000340413 HTN3P15516 51 aa4.88□□□□□ -1.63
NUP43-201ENST00000340413 TMEM170BQ5T4T1 132 aa4.88□□□□□ -1.63
NUP43-201ENST00000340413 H0Y8G0 127 aa4.88□□□□□ -1.63
NUP43-201ENST00000340413 LINC00469Q8N7U9 141 aa4.88□□□□□ -1.63
NUP43-201ENST00000340413 PKIGQ9Y2B9 76 aa4.88□□□□□ -1.63
NUP43-201ENST00000340413 IGHV3-64A0A075B6Q5 118 aa4.87□□□□□ -1.63
NUP43-201ENST00000340413 GVQW2A0A096LPI5 108 aaPredicted RBP4.87□□□□□ -1.63
NUP43-201ENST00000340413 PRB2P02812 416 aaPredicted RBP4.87□□□□□ -1.63
NUP43-201ENST00000340413 COX17Q14061 63 aa4.87□□□□□ -1.63
NUP43-201ENST00000340413 RNF151Q2KHN1 245 aa4.87□□□□□ -1.63
NUP43-201ENST00000340413 C2orf91Q6ZV80 131 aa4.87□□□□□ -1.63
NUP43-201ENST00000340413 OPRPNQ99935 248 aaPredicted RBP4.87□□□□□ -1.63
NUP43-201ENST00000340413 TMEM238C9JI98 176 aa4.87□□□□□ -1.63
NUP43-201ENST00000340413 CRPP02741 224 aa4.87□□□□□ -1.63
NUP43-201ENST00000340413 IGHV3-30-3P0DP02 117 aa4.87□□□□□ -1.63
NUP43-201ENST00000340413 ATOH7Q8N100 152 aa4.87□□□□□ -1.63
NUP43-201ENST00000340413 TM2D2Q9BX73 214 aa4.87□□□□□ -1.63
NUP43-201ENST00000340413 STPG4Q8N801 248 aa4.87□□□□□ -1.63
NUP43-201ENST00000340413 C2orf48Q96LS8 159 aa4.87□□□□□ -1.63
NUP43-201ENST00000340413 HUWE1Q7Z6Z7 4374 aaKnown RBP4.87□□□□□ -1.63
NUP43-201ENST00000340413 LOC107984156A0A0G2JMH3 177 aa4.86□□□□□ -1.63
NUP43-201ENST00000340413 TMEM262E9PQX1 116 aa4.86□□□□□ -1.63
NUP43-201ENST00000340413 COX7A2LO14548 114 aa4.86□□□□□ -1.63
NUP43-201ENST00000340413 FOXI1Q12951 378 aa4.86□□□□□ -1.63
NUP43-201ENST00000340413 ARL17AQ8IVW1 177 aa4.86□□□□□ -1.63
NUP43-201ENST00000340413 ZNF625Q96I27 306 aaPredicted RBP4.86□□□□□ -1.63
NUP43-201ENST00000340413 LINC00588Q9Y4M8 146 aa4.86□□□□□ -1.63
NUP43-201ENST00000340413 KRTAP26-1Q6PEX3 210 aa4.86□□□□□ -1.63
NUP43-201ENST00000340413 COX7B2Q8TF08 81 aa4.86□□□□□ -1.63
NUP43-201ENST00000340413 CDKN2A-AS1Q9UH64 79 aa4.86□□□□□ -1.63
NUP43-201ENST00000340413 DNAH9Q9NYC9 4486 aa4.86□□□□□ -1.63
NUP43-201ENST00000340413 IGKV2D-26A0A0A0MRZ7 120 aa4.85□□□□□ -1.63
NUP43-201ENST00000340413 C3orf84H3BNL1 204 aa4.85□□□□□ -1.63
NUP43-201ENST00000340413 ANGP03950 147 aaKnown RBP4.85□□□□□ -1.63
NUP43-201ENST00000340413 CIRBPQ14011 172 aaKnown RBP4.85□□□□□ -1.63
NUP43-201ENST00000340413 ZNF815PA8K554 130 aa4.85□□□□□ -1.63
NUP43-201ENST00000340413 ENHOQ6UWT2 76 aa4.85□□□□□ -1.63
NUP43-201ENST00000340413 CHCHD10Q8WYQ3 142 aaPredicted RBP4.85□□□□□ -1.63
NUP43-201ENST00000340413 PRO1933Q9H354 126 aa4.85□□□□□ -1.63
NUP43-201ENST00000340413 A0A1B0GWB2 263 aa4.85□□□□□ -1.63
NUP43-201ENST00000340413 PRSS2P07478 247 aa4.85□□□□□ -1.63
NUP43-201ENST00000340413 COX6A2Q02221 97 aa4.85□□□□□ -1.63
NUP43-201ENST00000340413 LINC00269Q8N2A0 174 aa4.84□□□□□ -1.63
NUP43-201ENST00000340413 NDUFA12Q9UI09 145 aa4.84□□□□□ -1.63
NUP43-201ENST00000340413 TRAV13-1A0A0B4J241 112 aa4.84□□□□□ -1.64
NUP43-201ENST00000340413 A6NDN8 102 aa4.84□□□□□ -1.64
NUP43-201ENST00000340413 C14orf144Q96I85 54 aa4.84□□□□□ -1.64
NUP43-201ENST00000340413 WWC2-AS2Q96NR7 200 aa4.84□□□□□ -1.64
NUP43-201ENST00000340413 DNAH6Q9C0G6 4158 aa4.84□□□□□ -1.64
NUP43-201ENST00000340413 TRBV30A0A0K0K1B3 111 aa4.83□□□□□ -1.64
NUP43-201ENST00000340413 C14orf177Q52M58 125 aa4.83□□□□□ -1.64
NUP43-201ENST00000340413 WFDC10BQ8IUB3 73 aa4.83□□□□□ -1.64
NUP43-201ENST00000340413 PCP2Q8IVA1 136 aa4.83□□□□□ -1.64
NUP43-201ENST00000340413 CEND1Q8N111 149 aa4.83□□□□□ -1.64
NUP43-201ENST00000340413 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.83□□□□□ -1.64
NUP43-201ENST00000340413 ORAOV1Q8WV07 137 aa4.83□□□□□ -1.64
NUP43-201ENST00000340413 IGLL5B9A064 214 aa4.82□□□□□ -1.64
NUP43-201ENST00000340413 TSPEAR-AS2P59090 65 aa4.82□□□□□ -1.64
NUP43-201ENST00000340413 BVES-AS1Q5T3Y7 98 aa4.82□□□□□ -1.64
NUP43-201ENST00000340413 MAPKAPK5-AS1Q8N8E1 139 aa4.82□□□□□ -1.64
NUP43-201ENST00000340413 SPINK8P0C7L1 97 aa4.82□□□□□ -1.64
NUP43-201ENST00000340413 RPL24P83731 157 aaKnown RBP4.82□□□□□ -1.64
NUP43-201ENST00000340413 COL5A1-AS1Q5SY13 56 aa4.82□□□□□ -1.64
NUP43-201ENST00000340413 C1orf43Q9BWL3 253 aa4.82□□□□□ -1.64
NUP43-201ENST00000340413 KIAA0087Q14695 138 aa4.82□□□□□ -1.64
NUP43-201ENST00000340413 LITAFQ99732 161 aa4.82□□□□□ -1.64
NUP43-201ENST00000340413 PKD1L1Q8TDX9 2849 aa4.82□□□□□ -1.64
NUP43-201ENST00000340413 GAGE12HA6NDE8 117 aa4.81□□□□□ -1.64
NUP43-201ENST00000340413 A0A0B4J2C4 111 aa4.81□□□□□ -1.64
NUP43-201ENST00000340413 TLX1NBP0CAT3 122 aa4.81□□□□□ -1.64
NUP43-201ENST00000340413 CTAG1AP78358 180 aa4.81□□□□□ -1.64
NUP43-201ENST00000340413 Q9H8V8 135 aa4.81□□□□□ -1.64
NUP43-201ENST00000340413 KLK12Q9UKR0 248 aa4.81□□□□□ -1.64
NUP43-201ENST00000340413 TRRAPQ9Y4A5 3859 aa4.81□□□□□ -1.64
NUP43-201ENST00000340413 IGHV3-30P01768 117 aa4.81□□□□□ -1.64
NUP43-201ENST00000340413 IGHV3-30-5P0DP03 117 aa4.81□□□□□ -1.64
NUP43-201ENST00000340413 SCGB1D4Q6XE38 83 aa4.81□□□□□ -1.64
NUP43-201ENST00000340413 NTN5Q8WTR8 489 aaPredicted RBP4.81□□□□□ -1.64
NUP43-201ENST00000340413 MALP21145 153 aa4.8□□□□□ -1.64
NUP43-201ENST00000340413 RNASE13Q5GAN3 156 aaKnown RBP4.8□□□□□ -1.64
NUP43-201ENST00000340413 NDUFC2O95298 119 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms