RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 GDF5OSQ5U4N7 250 aa9.62□□□□□ -0.87
USP47-202ENST00000339865 ZNF706Q9Y5V0 76 aaPredicted RBP9.62□□□□□ -0.87
USP47-202ENST00000339865 LST1O00453 97 aa9.62□□□□□ -0.87
USP47-202ENST00000339865 COL4A6Q14031 1691 aa9.62□□□□□ -0.87
USP47-202ENST00000339865 PLA2G5P39877 138 aa9.62□□□□□ -0.87
USP47-202ENST00000339865 MAP6D1Q9H9H5 199 aa9.62□□□□□ -0.87
USP47-202ENST00000339865 ZNF80P51504 273 aaPredicted RBP9.62□□□□□ -0.87
USP47-202ENST00000339865 LINC00322Q6ZN03 302 aaPredicted RBP9.61□□□□□ -0.87
USP47-202ENST00000339865 ZFHX2Q9C0A1 2572 aaPredicted RBP9.61□□□□□ -0.87
USP47-202ENST00000339865 PYGO1Q9Y3Y4 419 aa9.61□□□□□ -0.87
USP47-202ENST00000339865 RNASE3P12724 160 aaKnown RBP9.61□□□□□ -0.87
USP47-202ENST00000339865 TRBV6-8A0A0A6YYG3 113 aa9.61□□□□□ -0.87
USP47-202ENST00000339865 C11orf53Q8IXP5 236 aa9.6□□□□□ -0.87
USP47-202ENST00000339865 SYCNQ0VAF6 134 aa9.6□□□□□ -0.87
USP47-202ENST00000339865 IGLV5-52A0A0A0MRZ9 124 aa9.6□□□□□ -0.87
USP47-202ENST00000339865 TMEM89A2RUT3 159 aa9.59□□□□□ -0.87
USP47-202ENST00000339865 H0Y9P7 68 aa9.59□□□□□ -0.87
USP47-202ENST00000339865 IGLV3-1P01715 115 aa9.59□□□□□ -0.87
USP47-202ENST00000339865 SHISA2Q6UWI4 295 aa9.59□□□□□ -0.88
USP47-202ENST00000339865 ZNF524Q96C55 264 aa9.59□□□□□ -0.88
USP47-202ENST00000339865 PIEZO2Q9H5I5 2752 aa9.58□□□□□ -0.88
USP47-202ENST00000339865 IGHV6-1A0A0B4J1U7 121 aa9.58□□□□□ -0.88
USP47-202ENST00000339865 Q6JHZ5 121 aa9.58□□□□□ -0.88
USP47-202ENST00000339865 M0R378 163 aa9.58□□□□□ -0.88
USP47-202ENST00000339865 ZNF73O43830 326 aaPredicted RBP9.58□□□□□ -0.88
USP47-202ENST00000339865 NRACQ8N912 160 aa9.58□□□□□ -0.88
USP47-202ENST00000339865 SETD2Q9BYW2 2564 aaPredicted RBP9.57□□□□□ -0.88
USP47-202ENST00000339865 CRIP2P52943 208 aaPredicted RBP9.57□□□□□ -0.88
USP47-202ENST00000339865 PROK1P58294 105 aa9.57□□□□□ -0.88
USP47-202ENST00000339865 A0A087WVE0 104 aa9.57□□□□□ -0.88
USP47-202ENST00000339865 PLAC8L1A1L4L8 177 aa9.56□□□□□ -0.88
USP47-202ENST00000339865 PRLHP81277 87 aa9.56□□□□□ -0.88
USP47-202ENST00000339865 MDFIQ99750 246 aa9.56□□□□□ -0.88
USP47-202ENST00000339865 LY6G6DO95868 133 aa9.56□□□□□ -0.88
USP47-202ENST00000339865 Q8N3U1 123 aa9.56□□□□□ -0.88
USP47-202ENST00000339865 NTM-AS1Q6ZSK4 140 aa9.55□□□□□ -0.88
USP47-202ENST00000339865 C2orf91Q6ZV80 131 aa9.55□□□□□ -0.88
USP47-202ENST00000339865 TNFRSF13BO14836 293 aaPredicted RBP9.55□□□□□ -0.88
USP47-202ENST00000339865 LINC00482Q8N8I6 264 aa9.55□□□□□ -0.88
USP47-202ENST00000339865 FAM215AQ9Y5M1 114 aa9.55□□□□□ -0.88
USP47-202ENST00000339865 Q6ZS46 218 aa9.54□□□□□ -0.88
USP47-202ENST00000339865 SBSPONQ8IVN8 264 aa9.54□□□□□ -0.88
USP47-202ENST00000339865 Q9UF83 564 aa9.54□□□□□ -0.88
USP47-202ENST00000339865 MYCNOSP40205 109 aa9.54□□□□□ -0.88
USP47-202ENST00000339865 IGFL3Q6UXB1 125 aa9.54□□□□□ -0.88
USP47-202ENST00000339865 COL4A5P29400 1685 aa9.54□□□□□ -0.88
USP47-202ENST00000339865 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.53□□□□□ -0.88
USP47-202ENST00000339865 COX17Q14061 63 aa9.53□□□□□ -0.88
USP47-202ENST00000339865 DEFB116Q30KQ4 102 aa9.53□□□□□ -0.88
USP47-202ENST00000339865 ZNF843Q8N446 348 aa9.53□□□□□ -0.88
USP47-202ENST00000339865 M0QY20 66 aa9.53□□□□□ -0.88
USP47-202ENST00000339865 PRO0628Q9UI54 55 aa9.53□□□□□ -0.88
USP47-202ENST00000339865 C1orf137Q5JT78 98 aa9.52□□□□□ -0.89
USP47-202ENST00000339865 YPEL4Q96NS1 127 aa9.52□□□□□ -0.89
USP47-202ENST00000339865 IGLV4-69A0A075B6H9 119 aa9.51□□□□□ -0.89
USP47-202ENST00000339865 CR1P17927 2039 aa9.51□□□□□ -0.89
USP47-202ENST00000339865 A0A1B0GU69 56 aa9.51□□□□□ -0.89
USP47-202ENST00000339865 CD164L2Q6UWJ8 174 aa9.51□□□□□ -0.89
USP47-202ENST00000339865 LIMD2Q9BT23 127 aa9.51□□□□□ -0.89
USP47-202ENST00000339865 LINC00575Q6W349 94 aa9.51□□□□□ -0.89
USP47-202ENST00000339865 COX6B2Q6YFQ2 88 aa9.5□□□□□ -0.89
USP47-202ENST00000339865 Q8N814 137 aa9.49□□□□□ -0.89
USP47-202ENST00000339865 POLQO75417 2590 aa9.49□□□□□ -0.89
USP47-202ENST00000339865 CRIP1P50238 77 aa9.48□□□□□ -0.89
USP47-202ENST00000339865 Q8N6K4 173 aa9.48□□□□□ -0.89
USP47-202ENST00000339865 ODF3Q96PU9 254 aa9.48□□□□□ -0.89
USP47-202ENST00000339865 C7orf65Q6ZTY9 151 aa9.48□□□□□ -0.89
USP47-202ENST00000339865 MBD6Q96DN6 1003 aa9.48□□□□□ -0.89
USP47-202ENST00000339865 RNF185Q96GF1 192 aa9.48□□□□□ -0.89
USP47-202ENST00000339865 BPTFQ12830 3046 aa9.48□□□□□ -0.89
USP47-202ENST00000339865 BBC3Q96PG8 261 aaPredicted RBP9.48□□□□□ -0.89
USP47-202ENST00000339865 TRAV10A0A0B4J240 114 aa9.47□□□□□ -0.89
USP47-202ENST00000339865 C4orf26Q17RF5 130 aa9.47□□□□□ -0.89
USP47-202ENST00000339865 IGLV8-61A0A075B6I0 122 aa9.47□□□□□ -0.89
USP47-202ENST00000339865 PRR3P79522 188 aaKnown RBP9.46□□□□□ -0.89
USP47-202ENST00000339865 DAZAP2Q15038 168 aaPredicted RBP9.46□□□□□ -0.9
USP47-202ENST00000339865 KPRPQ5T749 579 aaPredicted RBP9.46□□□□□ -0.9
USP47-202ENST00000339865 CCDC140Q96MF4 163 aa9.46□□□□□ -0.9
USP47-202ENST00000339865 Q8N7P7 452 aa9.45□□□□□ -0.9
USP47-202ENST00000339865 LTBP1Q14766 1721 aa9.45□□□□□ -0.9
USP47-202ENST00000339865 TMEM254Q8TBM7 123 aa9.45□□□□□ -0.9
USP47-202ENST00000339865 IGKV2D-30A0A075B6S6 120 aa9.45□□□□□ -0.9
USP47-202ENST00000339865 IGKV2-30P06310 120 aa9.45□□□□□ -0.9
USP47-202ENST00000339865 U3KQK5 164 aa9.45□□□□□ -0.9
USP47-202ENST00000339865 SPTBN4Q9H254 2564 aa9.45□□□□□ -0.9
USP47-202ENST00000339865 A0A087WYN8 130 aa9.45□□□□□ -0.9
USP47-202ENST00000339865 LINC00959A0A1B0GUT2 108 aa9.44□□□□□ -0.9
USP47-202ENST00000339865 C8orf87E5RJ46 101 aa9.44□□□□□ -0.9
USP47-202ENST00000339865 FAM229AH3BQW9 127 aa9.44□□□□□ -0.9
USP47-202ENST00000339865 TSHBP01222 138 aa9.44□□□□□ -0.9
USP47-202ENST00000339865 LINC00474Q9P2X8 69 aa9.44□□□□□ -0.9
USP47-202ENST00000339865 TRBV6-4A0A1B0GX49 114 aa9.44□□□□□ -0.9
USP47-202ENST00000339865 ABCA12Q86UK0 2595 aa9.44□□□□□ -0.9
USP47-202ENST00000339865 hDV103S1A0JD37 113 aa9.43□□□□□ -0.9
USP47-202ENST00000339865 OXLD1Q5BKU9 147 aa9.43□□□□□ -0.9
USP47-202ENST00000339865 REG3GQ6UW15 175 aa9.43□□□□□ -0.9
USP47-202ENST00000339865 HCG22E2RYF7 251 aa9.43□□□□□ -0.9
USP47-202ENST00000339865 C9orf116Q5BN46 136 aaPredicted RBP9.43□□□□□ -0.9
USP47-202ENST00000339865 Q6ZSR3 168 aa9.43□□□□□ -0.9
USP47-202ENST00000339865 LINC01548A6NM66 108 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms