RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 SMAGPQ0VAQ4 97 aa11.57□□□□□ -0.56
LITAF-201ENST00000339430 C9orf66Q5T8R8 295 aa11.57□□□□□ -0.56
LITAF-201ENST00000339430 SHISA2Q6UWI4 295 aa11.57□□□□□ -0.56
LITAF-201ENST00000339430 SIGMAR1Q99720 223 aa11.57□□□□□ -0.56
LITAF-201ENST00000339430 A0A0U1RRA0 63 aa11.57□□□□□ -0.56
LITAF-201ENST00000339430 C9JAW5 83 aa11.57□□□□□ -0.56
LITAF-201ENST00000339430 ATP6V0E2Q8NHE4 81 aa11.57□□□□□ -0.56
LITAF-201ENST00000339430 C16orf74Q96GX8 76 aa11.57□□□□□ -0.56
LITAF-201ENST00000339430 HERVK_113P63121 156 aa11.56□□□□□ -0.56
LITAF-201ENST00000339430 CARD19Q96LW7 228 aa11.56□□□□□ -0.56
LITAF-201ENST00000339430 SPATA25Q9BR10 227 aa11.56□□□□□ -0.56
LITAF-201ENST00000339430 TEN1Q86WV5 123 aa11.56□□□□□ -0.56
LITAF-201ENST00000339430 WFDC9Q8NEX5 89 aa11.56□□□□□ -0.56
LITAF-201ENST00000339430 TRIAP1O43715 76 aa11.55□□□□□ -0.56
LITAF-201ENST00000339430 CMC4P56277 68 aaPredicted RBP11.55□□□□□ -0.56
LITAF-201ENST00000339430 SBSPONQ8IVN8 264 aa11.55□□□□□ -0.56
LITAF-201ENST00000339430 ANKRD29Q8N6D5 301 aa11.55□□□□□ -0.56
LITAF-201ENST00000339430 Q9H8V8 135 aa11.55□□□□□ -0.56
LITAF-201ENST00000339430 NDUFA1O15239 70 aa11.55□□□□□ -0.56
LITAF-201ENST00000339430 SLC25A20O43772 301 aa11.55□□□□□ -0.56
LITAF-201ENST00000339430 UBE2L6O14933 153 aa11.54□□□□□ -0.56
LITAF-201ENST00000339430 CSNK1G2-AS1Q8NCQ2 148 aa11.54□□□□□ -0.56
LITAF-201ENST00000339430 CDC42SE2Q9NRR3 84 aa11.54□□□□□ -0.56
LITAF-201ENST00000339430 TRGV4A0A0C4DH28 118 aa11.53□□□□□ -0.56
LITAF-201ENST00000339430 PPDPFLQ8WWR9 84 aa11.53□□□□□ -0.56
LITAF-201ENST00000339430 SMIM1B2RUZ4 78 aa11.53□□□□□ -0.56
LITAF-201ENST00000339430 IGLV5-39A0A0G2JS06 123 aa11.52□□□□□ -0.57
LITAF-201ENST00000339430 TMEM243Q9BU79 118 aa11.52□□□□□ -0.57
LITAF-201ENST00000339430 CSDC2Q9Y534 153 aaKnown RBP11.52□□□□□ -0.57
LITAF-201ENST00000339430 ICOSQ9Y6W8 199 aa11.52□□□□□ -0.57
LITAF-201ENST00000339430 TRBV30A0A0K0K1B3 111 aa11.51□□□□□ -0.57
LITAF-201ENST00000339430 ATXN8Q156A1 80 aa11.51□□□□□ -0.57
LITAF-201ENST00000339430 FAM110AQ9BQ89 295 aa11.51□□□□□ -0.57
LITAF-201ENST00000339430 IGKV3OR2-268A0A0C4DH90 116 aa11.5□□□□□ -0.57
LITAF-201ENST00000339430 TIMM17BO60830 172 aa11.5□□□□□ -0.57
LITAF-201ENST00000339430 RPL13AP40429 203 aaKnown RBP11.5□□□□□ -0.57
LITAF-201ENST00000339430 CIRBPQ14011 172 aaKnown RBP11.5□□□□□ -0.57
LITAF-201ENST00000339430 PKD1L1Q8TDX9 2849 aa11.5□□□□□ -0.57
LITAF-201ENST00000339430 GAGE6Q13070 117 aa11.49□□□□□ -0.57
LITAF-201ENST00000339430 LINC01620Q4KN68 170 aa11.49□□□□□ -0.57
LITAF-201ENST00000339430 FAM19A3Q7Z5A8 133 aa11.49□□□□□ -0.57
LITAF-201ENST00000339430 OVOL2Q9BRP0 275 aa11.49□□□□□ -0.57
LITAF-201ENST00000339430 CDIP1Q9H305 208 aa11.49□□□□□ -0.57
LITAF-201ENST00000339430 TRBV6-4A0A1B0GX49 114 aa11.48□□□□□ -0.57
LITAF-201ENST00000339430 F5H768 121 aa11.48□□□□□ -0.57
LITAF-201ENST00000339430 CLEC2BQ92478 149 aa11.48□□□□□ -0.57
LITAF-201ENST00000339430 IFITM1P13164 125 aa11.48□□□□□ -0.57
LITAF-201ENST00000339430 MEIG1Q5JSS6 88 aa11.48□□□□□ -0.57
LITAF-201ENST00000339430 LINC00308Q8TCZ7 52 aa11.48□□□□□ -0.57
LITAF-201ENST00000339430 NBEAL2Q6ZNJ1 2754 aa11.47□□□□□ -0.57
LITAF-201ENST00000339430 DEFB130BP0DP73 79 aa11.47□□□□□ -0.57
LITAF-201ENST00000339430 DEFB130AP0DP74 79 aa11.47□□□□□ -0.57
LITAF-201ENST00000339430 FHL2Q14192 279 aa11.47□□□□□ -0.57
LITAF-201ENST00000339430 OXLD1Q5BKU9 147 aa11.47□□□□□ -0.57
LITAF-201ENST00000339430 WIPF1O43516 503 aa11.46□□□□□ -0.57
LITAF-201ENST00000339430 SOSTDC1Q6X4U4 206 aa11.46□□□□□ -0.58
LITAF-201ENST00000339430 NTN5Q8WTR8 489 aaPredicted RBP11.46□□□□□ -0.58
LITAF-201ENST00000339430 MDFIQ99750 246 aa11.46□□□□□ -0.58
LITAF-201ENST00000339430 IGLV4-60A0A075B6I1 120 aa11.45□□□□□ -0.58
LITAF-201ENST00000339430 COX6CP09669 75 aa11.45□□□□□ -0.58
LITAF-201ENST00000339430 CHCHD5Q9BSY4 110 aa11.45□□□□□ -0.58
LITAF-201ENST00000339430 RNF183Q96D59 192 aa11.44□□□□□ -0.58
LITAF-201ENST00000339430 TRBV6-8A0A0A6YYG3 113 aa11.43□□□□□ -0.58
LITAF-201ENST00000339430 TOMM7Q9P0U1 55 aa11.43□□□□□ -0.58
LITAF-201ENST00000339430 TRBV10-2A0A0K0K1G8 114 aa11.42□□□□□ -0.58
LITAF-201ENST00000339430 MT-ATP8P03928 68 aa11.42□□□□□ -0.58
LITAF-201ENST00000339430 TEX49A0A1B0GTD5 131 aa11.42□□□□□ -0.58
LITAF-201ENST00000339430 XGP55808 180 aa11.42□□□□□ -0.58
LITAF-201ENST00000339430 H7C423 109 aa11.41□□□□□ -0.58
LITAF-201ENST00000339430 M0QXV9 152 aa11.41□□□□□ -0.58
LITAF-201ENST00000339430 CIDEAO60543 219 aa11.41□□□□□ -0.58
LITAF-201ENST00000339430 SCGB1A1P11684 91 aa11.41□□□□□ -0.58
LITAF-201ENST00000339430 C2orf82Q6UX34 121 aa11.41□□□□□ -0.58
LITAF-201ENST00000339430 LST1O00453 97 aa11.39□□□□□ -0.59
LITAF-201ENST00000339430 KRTAP10-11P60412 298 aa11.39□□□□□ -0.59
LITAF-201ENST00000339430 COX7B2Q8TF08 81 aa11.39□□□□□ -0.59
LITAF-201ENST00000339430 HERV-K104P63124 156 aa11.39□□□□□ -0.59
LITAF-201ENST00000339430 A0A096LPF7 62 aa11.38□□□□□ -0.59
LITAF-201ENST00000339430 GYPEP15421 78 aa11.38□□□□□ -0.59
LITAF-201ENST00000339430 UBE2WQ96B02 151 aa11.37□□□□□ -0.59
LITAF-201ENST00000339430 ANK2Q01484 3957 aa11.37□□□□□ -0.59
LITAF-201ENST00000339430 C5orf38Q86SI9 138 aa11.36□□□□□ -0.59
LITAF-201ENST00000339430 X6R8D5 127 aa11.36□□□□□ -0.59
LITAF-201ENST00000339430 KIR2DL5BQ8NHK3 375 aa11.36□□□□□ -0.59
LITAF-201ENST00000339430 COPS9Q8WXC6 57 aa11.36□□□□□ -0.59
LITAF-201ENST00000339430 TMEM262E9PQX1 116 aa11.35□□□□□ -0.59
LITAF-201ENST00000339430 DEFB4AO15263 64 aa11.35□□□□□ -0.59
LITAF-201ENST00000339430 EGFEM1PQ0D2K5 195 aa11.35□□□□□ -0.59
LITAF-201ENST00000339430 IGHV3OR16-9A0A0B4J2B5 98 aa11.35□□□□□ -0.59
LITAF-201ENST00000339430 MIR7-3HGQ8N6C7 128 aa11.35□□□□□ -0.59
LITAF-201ENST00000339430 CLPSL2Q6UWE3 100 aa11.34□□□□□ -0.59
LITAF-201ENST00000339430 CMYA5Q8N3K9 4069 aa11.34□□□□□ -0.59
LITAF-201ENST00000339430 C11orf68Q9H3H3 251 aaKnown RBP11.34□□□□□ -0.59
LITAF-201ENST00000339430 NOTCH1P46531 2555 aa11.34□□□□□ -0.59
LITAF-201ENST00000339430 H3BT86 120 aa11.33□□□□□ -0.6
LITAF-201ENST00000339430 IGHV4-30-4P0DP06 118 aa11.33□□□□□ -0.6
LITAF-201ENST00000339430 LINC01600Q96MT4 127 aa11.33□□□□□ -0.6
LITAF-201ENST00000339430 FAM222AQ5U5X8 452 aa11.33□□□□□ -0.6
LITAF-201ENST00000339430 LINC00612Q8N6U2 182 aa11.33□□□□□ -0.6
LITAF-201ENST00000339430 LINC00959A0A1B0GUT2 108 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms