RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 CDC42SE2Q9NRR3 84 aa10.51□□□□□ -0.73
UBA1-201ENST00000335972 LINC01620Q4KN68 170 aa10.51□□□□□ -0.73
UBA1-201ENST00000335972 CRLF1O75462 422 aa10.5□□□□□ -0.73
UBA1-201ENST00000335972 TMEM243Q9BU79 118 aa10.5□□□□□ -0.73
UBA1-201ENST00000335972 IGLV4-60A0A075B6I1 120 aa10.5□□□□□ -0.73
UBA1-201ENST00000335972 TIRAPP58753 221 aa10.5□□□□□ -0.73
UBA1-201ENST00000335972 HERVK_113P63121 156 aa10.5□□□□□ -0.73
UBA1-201ENST00000335972 SOSTDC1Q6X4U4 206 aa10.5□□□□□ -0.73
UBA1-201ENST00000335972 SPANXDQ9BXN6 97 aa10.5□□□□□ -0.73
UBA1-201ENST00000335972 C11orf68Q9H3H3 251 aaKnown RBP10.5□□□□□ -0.73
UBA1-201ENST00000335972 SPANXCQ9NY87 97 aa10.5□□□□□ -0.73
UBA1-201ENST00000335972 TEX49A0A1B0GTD5 131 aa10.5□□□□□ -0.73
UBA1-201ENST00000335972 CKS1BP61024 79 aa10.5□□□□□ -0.73
UBA1-201ENST00000335972 DAZ2Q13117 558 aaKnown RBP10.5□□□□□ -0.73
UBA1-201ENST00000335972 DAZ4Q86SG3 579 aaKnown RBP10.5□□□□□ -0.73
UBA1-201ENST00000335972 LINC00482Q8N8I6 264 aa10.5□□□□□ -0.73
UBA1-201ENST00000335972 CHCHD5Q9BSY4 110 aa10.5□□□□□ -0.73
UBA1-201ENST00000335972 DAZ3Q9NR90 486 aaKnown RBP10.5□□□□□ -0.73
UBA1-201ENST00000335972 NDUFA1O15239 70 aa10.49□□□□□ -0.73
UBA1-201ENST00000335972 XGP55808 180 aa10.49□□□□□ -0.73
UBA1-201ENST00000335972 PF4P02776 101 aa10.49□□□□□ -0.73
UBA1-201ENST00000335972 ATXN8Q156A1 80 aa10.49□□□□□ -0.73
UBA1-201ENST00000335972 CLPSL2Q6UWE3 100 aa10.49□□□□□ -0.73
UBA1-201ENST00000335972 CSNK1G2-AS1Q8NCQ2 148 aa10.49□□□□□ -0.73
UBA1-201ENST00000335972 C16orf74Q96GX8 76 aa10.49□□□□□ -0.73
UBA1-201ENST00000335972 TRBV10-1A0A0K0K1A3 114 aa10.48□□□□□ -0.73
UBA1-201ENST00000335972 SCGB1A1P11684 91 aa10.48□□□□□ -0.73
UBA1-201ENST00000335972 SBSPONQ8IVN8 264 aa10.48□□□□□ -0.73
UBA1-201ENST00000335972 LINC00308Q8TCZ7 52 aa10.48□□□□□ -0.73
UBA1-201ENST00000335972 IGLV5-45A0A087WSX0 123 aa10.48□□□□□ -0.73
UBA1-201ENST00000335972 TEX29Q8N6K0 151 aa10.47□□□□□ -0.73
UBA1-201ENST00000335972 ATP6V0E2Q8NHE4 81 aa10.47□□□□□ -0.73
UBA1-201ENST00000335972 J3QKU1 62 aa10.47□□□□□ -0.73
UBA1-201ENST00000335972 CIRBPQ14011 172 aaKnown RBP10.46□□□□□ -0.73
UBA1-201ENST00000335972 TRAV26-1A0A087WT03 109 aa10.46□□□□□ -0.73
UBA1-201ENST00000335972 IGLV5-39A0A0G2JS06 123 aa10.46□□□□□ -0.73
UBA1-201ENST00000335972 C5orf38Q86SI9 138 aa10.46□□□□□ -0.73
UBA1-201ENST00000335972 F5H768 121 aa10.46□□□□□ -0.74
UBA1-201ENST00000335972 HILS1P60008 231 aa10.46□□□□□ -0.74
UBA1-201ENST00000335972 FHL2Q14192 279 aa10.46□□□□□ -0.74
UBA1-201ENST00000335972 C16orf95Q9H693 158 aa10.46□□□□□ -0.74
UBA1-201ENST00000335972 TRBV30A0A0K0K1B3 111 aa10.45□□□□□ -0.74
UBA1-201ENST00000335972 C2orf82Q6UX34 121 aa10.45□□□□□ -0.74
UBA1-201ENST00000335972 NSD1Q96L73 2696 aaPredicted RBP10.45□□□□□ -0.74
UBA1-201ENST00000335972 TMEM262E9PQX1 116 aa10.44□□□□□ -0.74
UBA1-201ENST00000335972 H7C423 109 aa10.44□□□□□ -0.74
UBA1-201ENST00000335972 HIVEP1P15822 2718 aa10.43□□□□□ -0.74
UBA1-201ENST00000335972 COX6CP09669 75 aa10.42□□□□□ -0.74
UBA1-201ENST00000335972 KMT2BQ9UMN6 2715 aaPredicted RBP10.42□□□□□ -0.74
UBA1-201ENST00000335972 LY6G6DO95868 133 aa10.42□□□□□ -0.74
UBA1-201ENST00000335972 GYPEP15421 78 aa10.42□□□□□ -0.74
UBA1-201ENST00000335972 PFN2P35080 140 aa10.42□□□□□ -0.74
UBA1-201ENST00000335972 TRBV10-2A0A0K0K1G8 114 aa10.41□□□□□ -0.74
UBA1-201ENST00000335972 TEP1Q99973 2627 aaKnown RBP10.41□□□□□ -0.74
UBA1-201ENST00000335972 TRBV6-8A0A0A6YYG3 113 aa10.41□□□□□ -0.74
UBA1-201ENST00000335972 TRBV6-4A0A1B0GX49 114 aa10.41□□□□□ -0.74
UBA1-201ENST00000335972 Q8N3U1 123 aa10.41□□□□□ -0.74
UBA1-201ENST00000335972 INAFM1C9JVW0 142 aa10.4□□□□□ -0.74
UBA1-201ENST00000335972 CSDC2Q9Y534 153 aaKnown RBP10.4□□□□□ -0.74
UBA1-201ENST00000335972 XCL1P47992 114 aa10.4□□□□□ -0.74
UBA1-201ENST00000335972 OVOL2Q9BRP0 275 aa10.4□□□□□ -0.74
UBA1-201ENST00000335972 IFITM1P13164 125 aa10.4□□□□□ -0.75
UBA1-201ENST00000335972 MIR7-3HGQ8N6C7 128 aa10.4□□□□□ -0.75
UBA1-201ENST00000335972 TIMM17BO60830 172 aa10.39□□□□□ -0.75
UBA1-201ENST00000335972 LINC00158P58513 81 aa10.39□□□□□ -0.75
UBA1-201ENST00000335972 DEFB135Q30KP9 77 aa10.39□□□□□ -0.75
UBA1-201ENST00000335972 CMC4P56277 68 aaPredicted RBP10.39□□□□□ -0.75
UBA1-201ENST00000335972 COX7B2Q8TF08 81 aa10.39□□□□□ -0.75
UBA1-201ENST00000335972 UBE2WQ96B02 151 aa10.38□□□□□ -0.75
UBA1-201ENST00000335972 LST1O00453 97 aa10.37□□□□□ -0.75
UBA1-201ENST00000335972 SVIPQ8NHG7 77 aa10.37□□□□□ -0.75
UBA1-201ENST00000335972 FAM222AQ5U5X8 452 aa10.36□□□□□ -0.75
UBA1-201ENST00000335972 IGLV10-54A0A075B6I4 117 aa10.36□□□□□ -0.75
UBA1-201ENST00000335972 HTN3P15516 51 aa10.36□□□□□ -0.75
UBA1-201ENST00000335972 X6R8D5 127 aa10.35□□□□□ -0.75
UBA1-201ENST00000335972 FLNBO75369 2602 aaKnown RBP10.35□□□□□ -0.75
UBA1-201ENST00000335972 FAM218AQ96MZ4 157 aa10.35□□□□□ -0.75
UBA1-201ENST00000335972 Q9HAA7 133 aa10.35□□□□□ -0.75
UBA1-201ENST00000335972 TRAV8-4A0A0B4J246 113 aa10.34□□□□□ -0.75
UBA1-201ENST00000335972 IGHV3OR16-9A0A0B4J2B5 98 aa10.34□□□□□ -0.75
UBA1-201ENST00000335972 FAM19A3Q7Z5A8 133 aa10.34□□□□□ -0.75
UBA1-201ENST00000335972 TTC32Q5I0X7 151 aa10.33□□□□□ -0.76
UBA1-201ENST00000335972 LINC00337Q8N6G1 96 aa10.33□□□□□ -0.76
UBA1-201ENST00000335972 SND1-IT1Q9HBX3 110 aa10.33□□□□□ -0.76
UBA1-201ENST00000335972 LINC00959A0A1B0GUT2 108 aa10.32□□□□□ -0.76
UBA1-201ENST00000335972 FAM110AQ9BQ89 295 aa10.32□□□□□ -0.76
UBA1-201ENST00000335972 PKD1L1Q8TDX9 2849 aa10.32□□□□□ -0.76
UBA1-201ENST00000335972 RNF183Q96D59 192 aa10.32□□□□□ -0.76
UBA1-201ENST00000335972 C6orf226Q5I0X4 101 aa10.31□□□□□ -0.76
UBA1-201ENST00000335972 IGKV2-28A0A075B6P5 120 aa10.31□□□□□ -0.76
UBA1-201ENST00000335972 COX7A2LO14548 114 aa10.31□□□□□ -0.76
UBA1-201ENST00000335972 IGKV2D-28P01615 120 aa10.31□□□□□ -0.76
UBA1-201ENST00000335972 PAX4O43316 350 aa10.3□□□□□ -0.76
UBA1-201ENST00000335972 CCL18P55774 89 aa10.3□□□□□ -0.76
UBA1-201ENST00000335972 HERV-K104P63124 156 aa10.3□□□□□ -0.76
UBA1-201ENST00000335972 OR13C6PQ8NH95 151 aa10.3□□□□□ -0.76
UBA1-201ENST00000335972 PRR3P79522 188 aaKnown RBP10.3□□□□□ -0.76
UBA1-201ENST00000335972 CRPP02741 224 aa10.29□□□□□ -0.76
UBA1-201ENST00000335972 ATP5G1P05496 136 aa10.29□□□□□ -0.76
UBA1-201ENST00000335972 LINC00269Q8N2A0 174 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms