RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 P0C879 139 aa4.63□□□□□ -1.67
CSMD1-201ENST00000335551 C10orf25Q5T742 122 aa4.63□□□□□ -1.67
CSMD1-201ENST00000335551 IGHV4-30-4P0DP06 118 aa4.63□□□□□ -1.67
CSMD1-201ENST00000335551 IGHV4-31P0DP07 118 aa4.63□□□□□ -1.67
CSMD1-201ENST00000335551 CD164L2Q6UWJ8 174 aa4.63□□□□□ -1.67
CSMD1-201ENST00000335551 MAPK1IP1LQ8NDC0 245 aa4.63□□□□□ -1.67
CSMD1-201ENST00000335551 CTSZQ9UBR2 303 aa4.63□□□□□ -1.67
CSMD1-201ENST00000335551 PLA2G5P39877 138 aa4.62□□□□□ -1.67
CSMD1-201ENST00000335551 LRCOL1A6NCL2 159 aa4.62□□□□□ -1.67
CSMD1-201ENST00000335551 TMEM254Q8TBM7 123 aa4.62□□□□□ -1.67
CSMD1-201ENST00000335551 ESM1Q9NQ30 184 aa4.62□□□□□ -1.67
CSMD1-201ENST00000335551 RPS28P62857 69 aaKnown RBP4.62□□□□□ -1.67
CSMD1-201ENST00000335551 CR1P17927 2039 aa4.62□□□□□ -1.67
CSMD1-201ENST00000335551 ATRQ13535 2644 aa4.62□□□□□ -1.67
CSMD1-201ENST00000335551 TRBV10-3A0A0K0K1G6 114 aa4.62□□□□□ -1.67
CSMD1-201ENST00000335551 Q8N814 137 aa4.62□□□□□ -1.67
CSMD1-201ENST00000335551 SMIM11BQ8TCY0 68 aa4.62□□□□□ -1.67
CSMD1-201ENST00000335551 DCANP1Q8TF63 244 aa4.62□□□□□ -1.67
CSMD1-201ENST00000335551 MYCNOSP40205 109 aa4.61□□□□□ -1.67
CSMD1-201ENST00000335551 SYCNQ0VAF6 134 aa4.61□□□□□ -1.67
CSMD1-201ENST00000335551 IGHV4-61A0A0C4DH41 118 aa4.61□□□□□ -1.67
CSMD1-201ENST00000335551 CRYGAP11844 174 aa4.61□□□□□ -1.67
CSMD1-201ENST00000335551 SPAG11AQ6PDA7 123 aa4.61□□□□□ -1.67
CSMD1-201ENST00000335551 Q6ZSR3 168 aa4.61□□□□□ -1.67
CSMD1-201ENST00000335551 FAM215AQ9Y5M1 114 aa4.61□□□□□ -1.67
CSMD1-201ENST00000335551 hDV103S1A0JD37 113 aa4.61□□□□□ -1.67
CSMD1-201ENST00000335551 LINC00322Q6ZN03 302 aaPredicted RBP4.61□□□□□ -1.67
CSMD1-201ENST00000335551 MAP6D1Q9H9H5 199 aa4.61□□□□□ -1.67
CSMD1-201ENST00000335551 TRBV6-8A0A0A6YYG3 113 aa4.61□□□□□ -1.67
CSMD1-201ENST00000335551 Q8N3U1 123 aa4.61□□□□□ -1.67
CSMD1-201ENST00000335551 ZNF80P51504 273 aaPredicted RBP4.61□□□□□ -1.67
CSMD1-201ENST00000335551 A0A096LNI7 61 aa4.61□□□□□ -1.67
CSMD1-201ENST00000335551 LINC00208Q96KT6 92 aa4.61□□□□□ -1.67
CSMD1-201ENST00000335551 SPINK6Q6UWN8 80 aa4.6□□□□□ -1.67
CSMD1-201ENST00000335551 Q8N6K4 173 aa4.6□□□□□ -1.67
CSMD1-201ENST00000335551 LINC00474Q9P2X8 69 aa4.6□□□□□ -1.67
CSMD1-201ENST00000335551 MAST4O15021 2626 aa4.6□□□□□ -1.67
CSMD1-201ENST00000335551 IGF1P05019 195 aa4.6□□□□□ -1.67
CSMD1-201ENST00000335551 CCDC140Q96MF4 163 aa4.6□□□□□ -1.67
CSMD1-201ENST00000335551 PLA2G2CQ5R387 149 aa4.6□□□□□ -1.67
CSMD1-201ENST00000335551 C11orf45Q8TAV5 145 aa4.6□□□□□ -1.67
CSMD1-201ENST00000335551 XAGE1AQ9HD64 81 aa4.6□□□□□ -1.67
CSMD1-201ENST00000335551 SHISA2Q6UWI4 295 aa4.6□□□□□ -1.67
CSMD1-201ENST00000335551 TP53TG3Q9ULZ0 132 aa4.6□□□□□ -1.67
CSMD1-201ENST00000335551 CENPEQ02224 2701 aa4.6□□□□□ -1.67
CSMD1-201ENST00000335551 Q8IZM0 81 aa4.6□□□□□ -1.67
CSMD1-201ENST00000335551 TSHBP01222 138 aa4.59□□□□□ -1.67
CSMD1-201ENST00000335551 HILS1P60008 231 aa4.59□□□□□ -1.67
CSMD1-201ENST00000335551 IGKV2-28A0A075B6P5 120 aa4.59□□□□□ -1.67
CSMD1-201ENST00000335551 IGKV2D-28P01615 120 aa4.59□□□□□ -1.67
CSMD1-201ENST00000335551 IGF2-ASQ6U949 168 aa4.59□□□□□ -1.67
CSMD1-201ENST00000335551 Q6ZTI0 123 aa4.59□□□□□ -1.67
CSMD1-201ENST00000335551 H0Y9P7 68 aa4.59□□□□□ -1.67
CSMD1-201ENST00000335551 POM121L12Q8N7R1 296 aa4.59□□□□□ -1.67
CSMD1-201ENST00000335551 C8orf87E5RJ46 101 aa4.59□□□□□ -1.67
CSMD1-201ENST00000335551 DEFB4AO15263 64 aa4.59□□□□□ -1.67
CSMD1-201ENST00000335551 DEFB113Q30KQ7 82 aa4.59□□□□□ -1.67
CSMD1-201ENST00000335551 UNQ9165/PRO28630Q6UXU0 137 aa4.59□□□□□ -1.67
CSMD1-201ENST00000335551 TRBV6-4A0A1B0GX49 114 aa4.59□□□□□ -1.67
CSMD1-201ENST00000335551 LINC00574Q9H8X3 128 aa4.59□□□□□ -1.67
CSMD1-201ENST00000335551 PLAC8L1A1L4L8 177 aa4.59□□□□□ -1.68
CSMD1-201ENST00000335551 LY6LH3BQJ8 138 aa4.59□□□□□ -1.68
CSMD1-201ENST00000335551 BEAN1Q3B7T3 259 aa4.58□□□□□ -1.68
CSMD1-201ENST00000335551 PIP4P1Q86T03 277 aa4.58□□□□□ -1.68
CSMD1-201ENST00000335551 C1orf137Q5JT78 98 aa4.58□□□□□ -1.68
CSMD1-201ENST00000335551 HCG22E2RYF7 251 aa4.58□□□□□ -1.68
CSMD1-201ENST00000335551 CNFNQ9BYD5 112 aa4.58□□□□□ -1.68
CSMD1-201ENST00000335551 PPDPFQ9H3Y8 114 aa4.58□□□□□ -1.68
CSMD1-201ENST00000335551 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.58□□□□□ -1.68
CSMD1-201ENST00000335551 DEFB1P60022 68 aa4.58□□□□□ -1.68
CSMD1-201ENST00000335551 IGLV1-47P01700 117 aa4.57□□□□□ -1.68
CSMD1-201ENST00000335551 LOC100131303A0A0U1RQF7 123 aa4.57□□□□□ -1.68
CSMD1-201ENST00000335551 IGLV2-11P01706 119 aa4.57□□□□□ -1.68
CSMD1-201ENST00000335551 LINC01547P58512 204 aaPredicted RBP4.57□□□□□ -1.68
CSMD1-201ENST00000335551 A0A087WVE0 104 aa4.57□□□□□ -1.68
CSMD1-201ENST00000335551 IGLV4-69A0A075B6H9 119 aa4.56□□□□□ -1.68
CSMD1-201ENST00000335551 LINC01548A6NM66 108 aa4.56□□□□□ -1.68
CSMD1-201ENST00000335551 E7EUB6 86 aa4.56□□□□□ -1.68
CSMD1-201ENST00000335551 Q6ZS46 218 aa4.56□□□□□ -1.68
CSMD1-201ENST00000335551 DNAJC9-AS1A6NH13 148 aa4.56□□□□□ -1.68
CSMD1-201ENST00000335551 COL4A6Q14031 1691 aa4.56□□□□□ -1.68
CSMD1-201ENST00000335551 MRGPRG-AS1Q2M3A8 158 aa4.56□□□□□ -1.68
CSMD1-201ENST00000335551 LY6G6EA0A0G2JKS1 128 aa4.56□□□□□ -1.68
CSMD1-201ENST00000335551 U3KQA8 63 aa4.56□□□□□ -1.68
CSMD1-201ENST00000335551 IGLV9-49A0A0B4J1Y8 123 aa4.55□□□□□ -1.68
CSMD1-201ENST00000335551 K7EQG2 157 aa4.55□□□□□ -1.68
CSMD1-201ENST00000335551 TP53AIP1Q9HCN2 124 aa4.55□□□□□ -1.68
CSMD1-201ENST00000335551 ODF3BA8MYP8 253 aa4.55□□□□□ -1.68
CSMD1-201ENST00000335551 IGHV6-1A0A0B4J1U7 121 aa4.54□□□□□ -1.68
CSMD1-201ENST00000335551 A0A1B0GU69 56 aa4.54□□□□□ -1.68
CSMD1-201ENST00000335551 CRIP1P50238 77 aa4.54□□□□□ -1.68
CSMD1-201ENST00000335551 NUPR2A6NF83 97 aa4.54□□□□□ -1.68
CSMD1-201ENST00000335551 LELP1Q5T871 98 aa4.54□□□□□ -1.68
CSMD1-201ENST00000335551 A0A087WYN8 130 aa4.54□□□□□ -1.68
CSMD1-201ENST00000335551 ZNF843Q8N446 348 aa4.54□□□□□ -1.68
CSMD1-201ENST00000335551 SPRNQ5BIV9 151 aa4.54□□□□□ -1.68
CSMD1-201ENST00000335551 NBEAL1Q6ZS30 2694 aa4.54□□□□□ -1.68
CSMD1-201ENST00000335551 A6NDX4 124 aa4.54□□□□□ -1.68
CSMD1-201ENST00000335551 LY6G6CO95867 125 aa4.54□□□□□ -1.68
CSMD1-201ENST00000335551 BCE1O60756 84 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 604.2 ms